Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of āGā + āCā nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
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GCF_000240135.3 | NC_026474 | NC_026474.1 | Fusarium graminearum PH-1 chromosome 1; whole genome shotgun sequence. | 2997619 | 2990242 | 2817105 | 2823638 | 68691 | 11697295 | 0.26 | 0.26 | 0.24 | 0.24 | 0.01 | 0.48 | 0.9638 | 0.0024 | 0.9976 | 1.9961 | 2168 | 2084 | 4252 | 1732174 | 1611433 | 1784756 | 1641747 | 3624 | 6773734 | 0.26 | 0.24 | 0.26 | 0.24 | 0 | 0.5 | 0.9165 | 0.1489 | 0.8672 | 1.9903 | 1888 | 2114 | 2036 | 4150 | 1431125 | 1297920 | 1523483 | 1406483 | 0 | 5659011 | 0.25 | 0.24 | 0.26 | 0.25 | 0 | 0.51 | 0.8851 | 0.2595 | 0.7892 | 1.9646 | 0 | 168893 | 175813 | 142268 | 126812 | 3624 | 617410 | 0.28 | 0.29 | 0.22 | 0.2 | 0 | 0.43 | 0.8502 | 0.3331 | 0.7343 | 1.9383 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 36 | 34 | 70 | 1247 | 1597 | 1491 | 1815 | 0 | 6150 | 0.2 | 0.26 | 0.24 | 0.29 | 0 | 0.54 | 0.8932 | 0.2304 | 0.7988 | 1.9801 | 0 | 3 | 6 | 9 | 239 | 230 | 281 | 294 | 0 | 1044 | 0.23 | 0.22 | 0.27 | 0.28 | 0 | 0.55 | 0.9014 | 0.05 | 0.9518 | 1.9916 | 0 | 40482 | 54896 | 14178 | 28904 | 33451 | 52413 | 41939 | 27177 | 29402 | 32755 | 21941 | 42478 | 35012 | 23152 | 20697 | 38430 | 34869 | 22738 | 35888 | 26087 | 33934 | 30236 | 41572 | 43584 | 38547 | 32560 | 18499 | 31840 | 19829 | 30787 | 39599 | 35377 | 36348 | 14290 | 33634 | 44662 | 26329 | 29942 | 26082 | 40504 | 32191 | 25803 | 27639 | 35566 | 22627 | 29161 | 15737 | 29152 | 16933 | 26872 | 27831 | 23459 | 11818 | 35119 | 23617 | 34652 | 5229 | 15748 | 22170 | 19706 | 41710 | 5764 | 17162 | 32303 |
GCF_000240135.3 | NC_026475 | NC_026475.1 | Fusarium graminearum PH-1 chromosome 2; whole genome shotgun sequence. | 2303335 | 2308145 | 2128132 | 2122559 | 52430 | 8914601 | 0.26 | 0.26 | 0.24 | 0.24 | 0.01 | 0.48 | 0.9641 | 0.0024 | 0.9976 | 1.9955 | 1767 | 1742 | 3509 | 1299378 | 1237298 | 1321774 | 1229674 | 1754 | 5089878 | 0.26 | 0.24 | 0.26 | 0.24 | 0 | 0.5 | 0.9162 | 0.14 | 0.8746 | 1.991 | 2243 | 1695 | 1676 | 3371 | 1091347 | 1021265 | 1147525 | 1070414 | 0 | 4330551 | 0.26 | 0.24 | 0.26 | 0.25 | 0 | 0.5 | 0.8858 | 0.2527 | 0.7943 | 1.9645 | 0 | 139159 | 144704 | 112741 | 103378 | 1754 | 501736 | 0.28 | 0.29 | 0.22 | 0.2 | 0 | 0.42 | 0.8517 | 0.3237 | 0.7404 | 1.9377 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 51 | 42 | 93 | 1689 | 2051 | 1970 | 2309 | 0 | 8019 | 0.21 | 0.26 | 0.25 | 0.29 | 0 | 0.54 | 0.8951 | 0.2077 | 0.8175 | 1.981 | 0 | 12 | 19 | 31 | 834 | 807 | 949 | 1006 | 0 | 3596 | 0.23 | 0.22 | 0.26 | 0.28 | 0 | 0.54 | 0.8992 | 0.0579 | 0.9445 | 1.9931 | 0 | 31094 | 40241 | 11075 | 22761 | 25049 | 37605 | 32076 | 21605 | 22243 | 27087 | 17528 | 31205 | 26727 | 17251 | 16057 | 29729 | 26944 | 17184 | 29136 | 21474 | 25444 | 24210 | 30809 | 32862 | 28029 | 24698 | 14388 | 24628 | 16642 | 24313 | 31822 | 27915 | 29045 | 11445 | 25846 | 33293 | 19844 | 21476 | 21913 | 29783 | 24013 | 18728 | 21180 | 27786 | 18120 | 23018 | 12534 | 22505 | 14399 | 20872 | 20483 | 17427 | 9299 | 25416 | 17215 | 25390 | 4396 | 11931 | 15404 | 14797 | 31564 | 4593 | 13960 | 23237 |
GCF_000240135.3 | NC_026476 | NC_026476.1 | Fusarium graminearum PH-1 chromosome 3; whole genome shotgun sequence. | 1984007 | 1984209 | 1857865 | 1853043 | 34005 | 7713129 | 0.26 | 0.26 | 0.24 | 0.24 | 0 | 0.48 | 0.9636 | 0.0014 | 0.9987 | 1.9967 | 1476 | 1519 | 2995 | 1172726 | 1096650 | 1199201 | 1110519 | 2469 | 4581565 | 0.26 | 0.24 | 0.26 | 0.24 | 0 | 0.5 | 0.9162 | 0.1486 | 0.8677 | 1.9903 | 0 | 1419 | 1473 | 2892 | 989921 | 907270 | 1044542 | 969550 | 0 | 3911283 | 0.26 | 0.24 | 0.26 | 0.25 | 0 | 0.51 | 0.8858 | 0.258 | 0.7913 | 1.9648 | 0 | 114431 | 116952 | 93787 | 85960 | 2469 | 413599 | 0.28 | 0.29 | 0.22 | 0.2 | 0 | 0.43 | 0.8503 | 0.3317 | 0.7355 | 1.9383 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 47 | 38 | 85 | 1517 | 1894 | 1772 | 2148 | 0 | 7331 | 0.21 | 0.26 | 0.24 | 0.29 | 0 | 0.54 | 0.8937 | 0.2201 | 0.8071 | 1.9811 | 0 | 2 | 6 | 8 | 212 | 207 | 247 | 262 | 0 | 928 | 0.23 | 0.22 | 0.27 | 0.28 | 0 | 0.55 | 0.8981 | 0.0602 | 0.9422 | 1.9921 | 0 | 27901 | 38575 | 9590 | 20923 | 22448 | 35773 | 29200 | 19261 | 20188 | 23485 | 15287 | 28976 | 23768 | 16179 | 14565 | 26598 | 24176 | 15760 | 25110 | 18645 | 23332 | 21059 | 28803 | 29820 | 26221 | 22563 | 12791 | 22758 | 14088 | 21170 | 27852 | 24714 | 25415 | 9993 | 23732 | 30194 | 18025 | 20204 | 18696 | 27643 | 22036 | 17305 | 19038 | 24235 | 15890 | 20592 | 10733 | 20559 | 12210 | 18087 | 19031 | 16302 | 8248 | 23495 | 15750 | 23262 | 3761 | 10758 | 14436 | 13194 | 28705 | 3986 | 12203 | 22179 |
GCF_000240135.3 | NC_026477 | NC_026477.1 | Fusarium graminearum PH-1 chromosome 4; whole genome shotgun sequence. | 2049397 | 2050236 | 1935648 | 1928944 | 69717 | 8033942 | 0.26 | 0.26 | 0.24 | 0.24 | 0.01 | 0.48 | 0.9637 | 0.0019 | 0.9981 | 1.9945 | 1448 | 1483 | 2931 | 1198312 | 1118020 | 1235192 | 1135164 | 1374 | 4688062 | 0.26 | 0.24 | 0.26 | 0.24 | 0 | 0.5 | 0.9161 | 0.151 | 0.8656 | 1.9902 | 972 | 1402 | 1434 | 2836 | 982965 | 895215 | 1049342 | 965080 | 0 | 3892602 | 0.26 | 0.24 | 0.26 | 0.25 | 0 | 0.51 | 0.8834 | 0.2649 | 0.786 | 1.9625 | 0 | 124756 | 129290 | 104696 | 93601 | 1374 | 453717 | 0.28 | 0.29 | 0.22 | 0.2 | 0 | 0.43 | 0.851 | 0.3334 | 0.7338 | 1.9368 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 37 | 22 | 59 | 1104 | 1353 | 1294 | 1523 | 0 | 5274 | 0.21 | 0.26 | 0.25 | 0.29 | 0 | 0.54 | 0.8941 | 0.2047 | 0.8185 | 1.9824 | 0 | 7 | 19 | 26 | 9242 | 8921 | 8138 | 10070 | 0 | 36371 | 0.24 | 0.24 | 0.24 | 0.28 | 0 | 0.52 | 0.9154 | 0.0981 | 0.9096 | 1.9927 | 0 | 28076 | 37568 | 9488 | 20146 | 22557 | 34933 | 28394 | 18486 | 20461 | 22769 | 14780 | 28327 | 24431 | 16507 | 14581 | 25835 | 23959 | 15656 | 25608 | 18020 | 23764 | 20664 | 28924 | 28798 | 26336 | 22508 | 12808 | 22104 | 13501 | 21117 | 27025 | 23751 | 24651 | 9779 | 23302 | 30164 | 18381 | 20853 | 17917 | 27529 | 22709 | 17715 | 18867 | 23789 | 16101 | 19616 | 10436 | 20904 | 11950 | 18330 | 19528 | 16028 | 8478 | 23669 | 16977 | 23639 | 3790 | 10846 | 15479 | 13772 | 28608 | 4300 | 12640 | 22528 |