Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of āGā + āCā nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
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GCF_000303195.2 | NC_031951 | NC_031951.1 | Fusarium pseudograminearum CS3096 chromosome 1; whole genome shotgun sequence. | 3006811 | 3002830 | 2831618 | 2836363 | 11200 | 11688822 | 0.26 | 0.26 | 0.24 | 0.24 | 0 | 0.48 | 0.9638 | 0.0015 | 0.9985 | 1.9988 | 1969 | 1901 | 3870 | 1633113 | 1496439 | 1709943 | 1562808 | 0 | 6402303 | 0.25 | 0.23 | 0.27 | 0.24 | 0 | 0.51 | 0.9158 | 0.1533 | 0.8638 | 1.9888 | 14 | 1961 | 1892 | 3853 | 1465780 | 1322065 | 1571421 | 1440727 | 0 | 5799993 | 0.25 | 0.23 | 0.26 | 0.25 | 0 | 0.51 | 0.8853 | 0.2518 | 0.7939 | 1.9662 | 0 | 159504 | 167149 | 132162 | 116247 | 0 | 575062 | 0.28 | 0.29 | 0.23 | 0.2 | 0 | 0.42 | 0.8469 | 0.3345 | 0.7325 | 1.9391 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 40607 | 55901 | 14213 | 29787 | 34310 | 53243 | 42574 | 27158 | 30490 | 33688 | 22246 | 43300 | 35853 | 24070 | 20941 | 39444 | 36294 | 22902 | 36688 | 26332 | 34511 | 30801 | 42576 | 44109 | 39730 | 33820 | 18681 | 31939 | 20292 | 31732 | 40259 | 35739 | 37050 | 14502 | 34707 | 46017 | 27170 | 31123 | 27016 | 41990 | 33402 | 26991 | 28071 | 36539 | 23227 | 29237 | 16060 | 30042 | 17381 | 27507 | 28983 | 24129 | 11900 | 36228 | 24203 | 35878 | 5541 | 16350 | 23133 | 20292 | 43065 | 5832 | 18116 | 34258 |
GCF_000303195.2 | NC_031952 | NC_031952.1 | Fusarium pseudograminearum CS3096 chromosome 2; whole genome shotgun sequence. | 2296046 | 2294980 | 2118390 | 2122218 | 9300 | 8840934 | 0.26 | 0.26 | 0.24 | 0.24 | 0 | 0.48 | 0.9641 | 0.0011 | 0.9989 | 1.9983 | 1553 | 1598 | 3151 | 1227958 | 1157498 | 1271383 | 1173657 | 0 | 4830496 | 0.25 | 0.24 | 0.26 | 0.24 | 0 | 0.51 | 0.9164 | 0.1423 | 0.8729 | 1.9902 | 0 | 1548 | 1589 | 3137 | 1095433 | 1019554 | 1162262 | 1076741 | 0 | 4353990 | 0.25 | 0.24 | 0.26 | 0.25 | 0 | 0.51 | 0.8873 | 0.2439 | 0.7998 | 1.9675 | 0 | 125763 | 131489 | 101719 | 90287 | 0 | 449258 | 0.29 | 0.29 | 0.22 | 0.2 | 0 | 0.42 | 0.8469 | 0.3297 | 0.736 | 1.9388 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 30984 | 40586 | 10812 | 23056 | 25305 | 38322 | 32313 | 21411 | 22555 | 26874 | 17313 | 31429 | 26751 | 17487 | 15908 | 29913 | 26861 | 17273 | 29494 | 21168 | 25557 | 24114 | 31385 | 33056 | 28558 | 24914 | 14218 | 24609 | 16314 | 24563 | 32086 | 27854 | 29261 | 11354 | 26167 | 33947 | 19951 | 22040 | 21844 | 30553 | 24194 | 19210 | 21327 | 28168 | 18174 | 22793 | 12647 | 22231 | 14027 | 20840 | 20931 | 17773 | 9314 | 25948 | 17050 | 25980 | 4298 | 11851 | 15741 | 14781 | 31773 | 4341 | 13507 | 23694 |
GCF_000303195.2 | NC_031953 | NC_031953.1 | Fusarium pseudograminearum CS3096 chromosome 3; whole genome shotgun sequence. | 2003293 | 2000940 | 1857025 | 1854636 | 8700 | 7724594 | 0.26 | 0.26 | 0.24 | 0.24 | 0 | 0.48 | 0.9635 | 0.0012 | 0.9988 | 1.9983 | 1383 | 1310 | 2693 | 1111589 | 1023035 | 1152381 | 1059324 | 0 | 4346329 | 0.26 | 0.23 | 0.27 | 0.24 | 0 | 0.51 | 0.9157 | 0.1518 | 0.8653 | 1.9886 | 0 | 1381 | 1296 | 2677 | 997360 | 905838 | 1061611 | 977230 | 0 | 3942039 | 0.26 | 0.24 | 0.26 | 0.25 | 0 | 0.51 | 0.8841 | 0.2565 | 0.7913 | 1.9629 | 0 | 106196 | 109680 | 84403 | 75711 | 0 | 375990 | 0.29 | 0.29 | 0.22 | 0.2 | 0 | 0.42 | 0.8457 | 0.3331 | 0.7341 | 1.937 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 27860 | 38987 | 9383 | 20719 | 22622 | 36102 | 29458 | 18951 | 20600 | 23357 | 15317 | 29240 | 24224 | 16627 | 14548 | 26880 | 24460 | 15563 | 25294 | 18290 | 23339 | 20888 | 29097 | 29855 | 26730 | 23047 | 12709 | 22659 | 13808 | 21202 | 28080 | 24685 | 25771 | 9856 | 24071 | 31051 | 18303 | 20704 | 18762 | 28358 | 22452 | 18008 | 19168 | 24695 | 16032 | 20249 | 10875 | 20605 | 11964 | 18068 | 19370 | 16599 | 7953 | 24024 | 15882 | 23796 | 3803 | 10823 | 14934 | 13197 | 29091 | 3896 | 12244 | 22717 |
GCF_000303195.2 | NC_031954 | NC_031954.1 | Fusarium pseudograminearum CS3096 chromosome 4; whole genome shotgun sequence. | 2086082 | 2082163 | 1949534 | 1949617 | 8500 | 8075896 | 0.26 | 0.26 | 0.24 | 0.24 | 0 | 0.48 | 0.9638 | 0.001 | 0.999 | 1.9986 | 1315 | 1366 | 2681 | 1114065 | 1027956 | 1170002 | 1065458 | 0 | 4377481 | 0.25 | 0.23 | 0.27 | 0.24 | 0 | 0.51 | 0.9152 | 0.1551 | 0.8624 | 1.9879 | 0 | 1306 | 1352 | 2658 | 994546 | 903227 | 1071357 | 979119 | 0 | 3948249 | 0.25 | 0.23 | 0.26 | 0.25 | 0 | 0.51 | 0.8853 | 0.2576 | 0.7901 | 1.9653 | 0 | 110704 | 116398 | 94369 | 81986 | 0 | 403457 | 0.28 | 0.29 | 0.23 | 0.2 | 0 | 0.43 | 0.8472 | 0.3364 | 0.7318 | 1.9404 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 27830 | 37698 | 9423 | 20582 | 23092 | 35534 | 28613 | 18508 | 20912 | 23257 | 14899 | 28876 | 24500 | 16749 | 14485 | 26426 | 24427 | 15520 | 26073 | 18033 | 23757 | 20823 | 29388 | 29259 | 26651 | 22834 | 12805 | 21783 | 13679 | 21572 | 27692 | 24186 | 25252 | 9670 | 23452 | 30780 | 18669 | 21517 | 18386 | 28282 | 22918 | 18419 | 19058 | 24641 | 16462 | 19756 | 10706 | 20942 | 12204 | 18588 | 19853 | 16645 | 8097 | 24259 | 16721 | 24294 | 3722 | 11225 | 15694 | 13874 | 29523 | 4126 | 12825 | 23423 |