GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_030384665.1	NC_083673	NC_083673.1	Lodderomyces elongisporus chromosome 1; complete sequence.	1130428	1137282	667821	661476	3597007	0.31	0.32	0.19	0.18	0.37	0.9442	0.0078	0.9922	1.9503	605	688	1293	709619	583950	412032	455962	2161563	0.33	0.27	0.19	0.21	0.4	0.9058	0.2183	0.8111	1.9578	597	680	1277	689086	562548	401347	445918	2098899	0.33	0.27	0.18	0.22	0.4	0.8952	0.2805	0.7775	1.9344	20186	20929	10368	9631	61114	0.33	0.34	0.17	0.16	0.33	0.8451	0.3747	0.7092	1.8605	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8	8	16	347	473	317	413	1550	0.22	0.3	0.21	0.27	0.48	0.8819	0.2928	0.7515	1.9733	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	13311	21313	7355	13063	16548	17405	12954	21094	7033	6881	25405	28096	15911	4611	11033	17480	11432	9150	9125	19456	4865	15317	5494	25903	9487	8167	5781	27473	12200	11208	11853	10625	6590	9968	15301	13828	7009	4436	10436	7487	7460	2150	27753	6767	3060	15627	4073	13514	4895	9501	7761	3872	12787	7404	5018	14860	832	1586	3270	3896	24168	1300	1576	4303
GCF_030384665.1	NC_083674	NC_083674.1	Lodderomyces elongisporus chromosome 2; complete sequence.	866566	876230	522254	516471	2781521	0.31	0.32	0.19	0.19	0.37	0.9443	0.0111	0.9889	1.9533	499	526	1025	542456	446660	320022	349504	1658642	0.32	0.27	0.19	0.22	0.41	0.9041	0.2178	0.8132	1.9576	492	509	1001	511290	423403	300496	336319	1571508	0.32	0.27	0.19	0.22	0.41	0.8927	0.2897	0.771	1.9372	30748	22764	19081	12622	85215	0.36	0.28	0.21	0.15	0.36	0.8336	0.557	0.6088	1.8207	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	7	17	24	418	493	445	563	1919	0.22	0.25	0.23	0.3	0.53	0.8929	0.254	0.782	1.9747	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	9741	15938	5453	9570	11982	13091	9367	15661	5386	6022	18042	20886	11779	3401	7728	12840	8177	7081	7310	14980	3430	11297	4139	18514	6837	6679	3937	20401	9263	8474	9114	8165	5196	7271	11348	10231	5212	3611	8186	5696	5189	1589	20633	4950	2923	12331	3140	10566	4462	6837	5592	2738	9116	5308	4050	11093	811	1357	2295	2985	18017	1120	1790	3358
GCF_030384665.1	NC_083675	NC_083675.1	Lodderomyces elongisporus chromosome 3; complete sequence.	730193	729557	438555	430556	2328861	0.31	0.31	0.19	0.18	0.37	0.941	0.0096	0.9904	1.9531	420	410	830	425642	345360	250795	273405	1295202	0.33	0.26	0.19	0.22	0.41	0.9044	0.2321	0.8015	1.9574	412	406	818	408988	332008	241457	266612	1249065	0.33	0.27	0.19	0.22	0.41	0.8895	0.2963	0.7665	1.9325	16456	13086	9110	6504	45156	0.34	0.3	0.19	0.16	0.35	0.8395	0.4184	0.6813	1.8706	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8	4	12	198	266	228	289	981	0.2	0.27	0.23	0.3	0.53	0.886	0.2702	0.7681	1.9771	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8051	12930	4293	7198	9739	10638	7831	12334	4173	4334	14081	16590	9678	2609	6098	10633	6510	5525	5770	11267	2798	9150	3394	15333	5608	5086	3209	16220	7195	6744	7532	6262	3852	5848	9367	8406	4293	2663	6529	4728	4421	1288	16151	3981	1924	9444	2230	8240	2994	5209	4582	2234	7313	4263	2899	9259	835	895	2015	2459	14539	838	1080	2676
GCF_030384665.1	NC_083676	NC_083676.1	Lodderomyces elongisporus chromosome 4; complete sequence.	644614	650768	379704	383132	2058218	0.31	0.32	0.18	0.19	0.37	0.9427	0.0092	0.9908	1.9511	363	359	722	386577	315219	228829	249254	1179879	0.32	0.27	0.19	0.22	0.41	0.9051	0.2217	0.809	1.9585	354	347	701	375398	304112	222264	243638	1145412	0.33	0.27	0.19	0.22	0.41	0.893	0.2809	0.7766	1.9362	10853	10688	6195	5147	32883	0.32	0.34	0.18	0.15	0.34	0.8494	0.4234	0.678	1.8544	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	9	12	21	326	419	370	469	1584	0.21	0.26	0.23	0.3	0.53	0.899	0.2659	0.7727	1.9769	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	7216	11503	3880	7708	8878	9854	6942	11251	3713	4127	13167	15442	8850	2954	5796	9767	5985	4971	5151	10674	2652	8432	3034	13480	5287	5037	3083	14477	6658	6191	6540	5822	3601	5292	8470	7565	3848	2494	5974	4002	3986	1158	14860	3775	1813	8451	2223	7024	2787	4992	4105	2076	6584	3991	2788	8371	443	938	1718	2148	13668	760	1009	2299
GCF_030384665.1	NC_083677	NC_083677.1	Lodderomyces elongisporus chromosome 5; complete sequence.	554186	551988	327797	328535	1762506	0.31	0.31	0.19	0.19	0.37	0.943	0.0031	0.9969	1.9525	324	298	622	347164	285333	201743	224696	1058936	0.32	0.27	0.19	0.22	0.41	0.9056	0.2331	0.8022	1.9556	316	293	609	336835	274937	195284	219157	1026213	0.32	0.27	0.18	0.23	0.41	0.8872	0.3062	0.7621	1.9273	10104	10088	6236	5259	31687	0.33	0.31	0.19	0.17	0.36	0.8546	0.3172	0.7451	1.8991	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8	5	13	225	308	223	280	1036	0.22	0.3	0.22	0.27	0.49	0.8815	0.2671	0.7696	1.9788	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	6286	10417	3359	6855	7986	8909	6008	10163	3362	4349	12142	14276	7682	2160	5499	8247	5476	4601	4670	9474	2242	7296	2779	12930	4343	4166	2581	12900	6169	5590	5838	5228	3206	4682	7626	6671	3414	2109	5366	3662	3704	1021	13443	3287	1609	7661	1903	6171	2547	4536	3624	1788	5982	3524	2302	7405	880	719	1412	1912	11933	730	1031	2158
GCF_030384665.1	NC_083678	NC_083678.1	Lodderomyces elongisporus chromosome 6; complete sequence.	412372	416111	241210	242644	1312337	0.31	0.32	0.18	0.18	0.37	0.9422	0.0075	0.9926	1.9497	214	252	466	242240	196018	141579	153970	733807	0.33	0.27	0.19	0.21	0.41	0.9042	0.2294	0.8037	1.9564	209	247	456	235244	189314	137342	150582	712482	0.33	0.27	0.19	0.22	0.4	0.8899	0.3139	0.7615	1.9171	6738	6352	3940	3108	20138	0.35	0.31	0.19	0.16	0.35	0.8351	0.3715	0.7165	1.866	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4	5	9	146	207	164	208	725	0.2	0.28	0.23	0.29	0.52	0.9029	0.2931	0.7498	1.9738	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5006	7560	2452	4410	5461	5872	4070	7096	2297	2532	8210	9371	5301	1557	3784	6791	3701	3137	3300	6374	1744	5207	1988	8523	3238	3202	1933	9305	4043	3787	4111	3513	2115	3523	5259	4542	2514	1437	3702	2467	2483	702	9128	2123	1198	5012	1261	4571	1785	3256	2676	1185	4022	2436	1697	5245	376	541	1062	1381	8181	542	723	1426
GCF_030384665.1	NC_083679	NC_083679.1	Lodderomyces elongisporus chromosome 7; complete sequence.	359798	363387	217128	216977	1157290	0.31	0.31	0.19	0.19	0.38	0.9414	0.0053	0.9947	1.9545	187	200	387	215257	175928	130403	137447	659035	0.33	0.27	0.2	0.21	0.41	0.9048	0.2295	0.8031	1.9586	184	200	384	205106	166480	124390	132833	628809	0.33	0.27	0.18	0.22	0.4	0.891	0.331	0.7524	1.9153	9975	9217	5807	4475	29474	0.32	0.33	0.18	0.17	0.35	0.841	0.4092	0.6855	1.8743	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2	0	2	35	52	39	50	176	0.2	0.29	0.22	0.29	0.51	0.8838	0.3161	0.7287	1.979	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3919	6008	2246	3592	4804	5333	3718	6200	2089	2208	6812	8312	4673	1310	3123	5123	3249	2843	3036	5652	1532	4194	1874	7628	2799	2589	1854	7843	3665	3290	3849	3176	1976	2922	4547	4305	2633	1471	3495	2216	2309	699	7839	1949	1134	4502	1179	3978	1673	2727	2303	1257	3647	2089	1517	4619	283	540	1073	1254	8375	454	741	1319
GCF_030384665.1	NC_083680	NC_083680.1	Lodderomyces elongisporus chromosome 8; complete sequence.	342451	342831	201856	201582	1088720	0.31	0.31	0.19	0.19	0.37	0.9413	0.0012	0.9988	1.9511	182	203	385	207981	170256	121019	132576	631832	0.32	0.27	0.19	0.21	0.41	0.9012	0.2284	0.807	1.9545	182	200	382	197563	163361	115629	128871	605424	0.32	0.27	0.19	0.22	0.41	0.8914	0.2746	0.7839	1.9338	10377	6836	5338	3640	26191	0.38	0.28	0.19	0.14	0.34	0.8258	0.5351	0.6257	1.805	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	3	3	41	59	52	65	217	0.19	0.27	0.24	0.3	0.54	0.8703	0.2913	0.7478	1.9795	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3861	5815	2181	3759	4692	4991	3797	5997	1997	2163	7240	8074	4762	1272	3317	5089	3446	2577	2807	5711	1426	4477	1602	7445	2612	2427	1506	7581	3582	3319	3345	3015	1859	2773	4415	3865	1891	1274	3009	2144	2187	632	7797	1927	939	4699	1172	3932	1555	2857	2173	1102	3565	2044	1402	4283	332	478	935	1182	7042	464	630	1317