GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	fr_tRNA_N Frequency of 'N' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_029542785.1	NC_083370	NC_083370.1	Malassezia japonica chromosome 1; complete sequence.	396815	397582	660657	659465	2114519	0.19	0.19	0.31	0.31	0.62	0.9408	0.0019	0.9981	1.9549	550	577	1127	334897	312159	582923	561535	1791514	0.19	0.18	0.32	0.31	0.63	0.897	0.1269	0.8864	1.9388	547	573	1120	320199	295629	562657	542093	1720578	0.2	0.18	0.31	0.31	0.62	0.8688	0.2386	0.8073	1.9195	14568	16360	20094	19249	70271	0.21	0.24	0.28	0.27	0.55	0.8328	0.3701	0.7111	1.9284	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3	4	7	130	170	172	193	665	0.2	0.25	0.26	0.29	0	0.55	0.8904	0.2094	0.8181	1.9814	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	11114	15181	2719	3184	11071	22344	8779	5103	6250	8196	2938	7104	2721	15952	3273	9294	3789	15552	7249	7740	16628	6657	18567	7319	15667	9718	2276	4575	2741	4993	10513	5647	12844	946	4070	20742	11483	11387	9257	18631	12016	26433	3647	20581	8859	3003	5042	2679	3183	4404	17464	29729	772	6996	4019	5441	654	9351	17597	9042	6413	515	2385	8380
GCF_029542785.1	NC_083371	NC_083371.1	Malassezia japonica chromosome 2; complete sequence.	264755	266595	441542	441343	1414235	0.19	0.19	0.31	0.31	0.62	0.9408	0.0037	0.9963	1.955	372	368	740	231012	215573	397307	383673	1227565	0.19	0.18	0.32	0.31	0.63	0.8984	0.1252	0.888	1.9418	362	360	722	220970	204103	383829	370656	1179558	0.2	0.19	0.3	0.31	0.61	0.8681	0.2381	0.8087	1.923	9681	11019	13052	12486	46238	0.21	0.25	0.28	0.27	0.54	0.8342	0.3732	0.7082	1.9305	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	10	8	18	361	451	426	531	1769	0.2	0.26	0.24	0.3	0	0.54	0.8845	0.2462	0.7847	1.9738	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	7782	10663	1822	2190	7987	15376	6283	3599	4379	5464	2086	4996	1884	10879	2297	6464	2779	10630	4874	5141	11308	4590	12531	5177	10916	6567	1515	3415	1812	3557	6957	4294	8551	656	2819	13956	7623	7699	6432	12855	8510	17675	2559	13824	6162	2170	3368	1967	2224	3097	11807	20356	507	4998	2571	3694	424	5996	12065	6131	4211	369	1637	5574
GCF_029542785.1	NC_083372	NC_083372.1	Malassezia japonica chromosome 3; complete sequence.	197097	194467	318272	314819	1024655	0.19	0.19	0.31	0.31	0.62	0.9434	0.0122	0.9879	1.9595	266	238	504	165097	156064	281247	269016	871424	0.19	0.18	0.32	0.31	0.62	0.9	0.1283	0.885	1.9449	260	231	491	156525	146521	270345	258539	831930	0.2	0.19	0.31	0.3	0.61	0.8706	0.2308	0.813	1.9269	8298	9211	10596	10118	38223	0.22	0.25	0.27	0.26	0.53	0.837	0.3656	0.7135	1.9338	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	6	7	13	274	332	306	359	1271	0.21	0.26	0.24	0.28	0	0.52	0.8884	0.2285	0.8051	1.9779	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5505	7276	1341	1675	5251	10925	4446	2723	3209	3861	1580	3609	1375	7682	1705	4739	1891	7559	3617	3714	8049	3369	8859	3642	7641	4797	1105	2561	1411	2316	5054	2985	6316	495	2034	9687	5539	5631	4544	9065	5861	12167	1881	9770	4203	1574	2158	1319	1482	2129	8181	13739	438	3590	1990	2560	285	4145	8297	4414	3015	241	1169	3593
GCF_029542785.1	NC_083373	NC_083373.1	Malassezia japonica chromosome 4; complete sequence.	152484	151735	256293	255307	815819	0.19	0.19	0.31	0.31	0.63	0.9402	0.0044	0.9956	1.9529	212	211	423	127330	119214	226432	218002	690978	0.19	0.18	0.32	0.31	0.63	0.8971	0.132	0.8827	1.9379	210	209	419	122472	113450	219651	211357	666930	0.2	0.19	0.31	0.31	0.62	0.8671	0.2443	0.8028	1.9208	4776	5654	6684	6527	23641	0.2	0.25	0.28	0.27	0.55	0.8306	0.3748	0.7069	1.9266	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2	2	4	82	110	97	118	407	0.2	0.27	0.24	0.29	0	0.53	0.8881	0.2392	0.79	1.9851	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4227	5682	957	1154	4375	8841	3144	1916	2374	3131	1200	2622	1085	6144	1320	3580	1383	6123	2707	3096	6601	2189	7786	2728	6204	3778	735	1887	1091	2046	4006	2117	5368	325	1560	8149	4444	4383	3710	7761	4821	9993	1402	8179	3340	1071	1857	1043	1145	1553	6861	12443	291	2436	1488	2009	208	3371	7106	3221	2232	184	900	2968
GCF_029542785.1	NC_083374	NC_083374.1	Malassezia japonica chromosome 5; complete sequence.	138059	138584	230324	230685	737652	0.19	0.19	0.31	0.31	0.62	0.938	0.0027	0.9973	1.9545	191	172	363	113163	105240	199545	191941	609889	0.19	0.18	0.32	0.31	0.63	0.8964	0.1253	0.8877	1.9387	188	170	358	108631	100201	193673	186311	588816	0.2	0.19	0.3	0.31	0.61	0.8681	0.2403	0.8087	1.9194	4446	4927	5756	5492	20621	0.21	0.24	0.28	0.27	0.54	0.8343	0.378	0.7052	1.928	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3	2	5	86	112	116	138	452	0.19	0.25	0.26	0.3	0	0.56	0.9092	0.2373	0.7975	1.9738	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3866	5478	837	1012	3561	8676	2717	1799	2089	2759	1062	2476	802	5642	1116	3265	1196	5513	2606	2737	6162	2102	6987	2419	5856	3413	597	1591	899	1432	3751	1930	4500	260	1328	7327	3894	4037	3329	6809	4025	9013	1224	7147	2650	898	1633	797	918	1307	5990	10785	198	2120	1008	1533	201	2710	6240	2950	1883	123	621	2248
GCF_029542785.1	NC_083375	NC_083375.1	Malassezia japonica chromosome 6; complete sequence.	129726	132365	219880	219417	701388	0.18	0.19	0.31	0.31	0.63	0.9362	0.0111	0.989	1.9534	194	162	356	115857	108307	201294	195077	620535	0.19	0.18	0.32	0.31	0.63	0.8979	0.1177	0.8942	1.9389	194	161	355	109604	101369	192950	187131	591054	0.2	0.18	0.31	0.31	0.62	0.8734	0.2281	0.8153	1.9253	6006	6679	8029	7685	28399	0.21	0.25	0.28	0.27	0.54	0.8393	0.3653	0.7132	1.9315	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3784	5151	930	1098	3887	7826	3062	1745	2123	2864	1046	2548	938	5443	1163	3046	1209	5280	2401	2645	5712	2172	6594	2540	5318	3297	726	1624	948	1714	3533	1960	4303	278	1356	6890	3966	3629	3229	6490	4071	9166	1275	7184	3072	1067	1745	998	1094	1628	5907	10543	293	2338	1315	1936	233	3117	6144	3151	2071	151	810	2999
GCF_029542785.1	NC_083376	NC_083376.1	Malassezia japonica chromosome 7; complete sequence.	105304	103214	171077	169221	548816	0.19	0.19	0.31	0.31	0.62	0.939	0.0155	0.9847	1.958	136	134	270	82807	76524	145857	139921	445109	0.19	0.18	0.32	0.31	0.63	0.8949	0.1427	0.8733	1.9353	133	133	266	77997	70993	139974	134153	423117	0.2	0.18	0.31	0.31	0.62	0.8653	0.2505	0.7995	1.9166	4639	5328	5692	5532	21191	0.22	0.25	0.27	0.26	0.54	0.8358	0.3664	0.7133	1.929	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3	0	3	55	73	65	84	277	0.2	0.26	0.23	0.3	0	0.54	0.8609	0.268	0.7663	1.9815	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2693	4109	560	732	2505	6042	2032	1238	1459	1893	719	1607	525	4095	774	2337	859	3815	1837	1900	4194	1515	5087	1667	4048	2481	441	1044	628	1120	2732	1289	3226	235	885	5416	2814	2838	2418	4938	3115	6621	888	5009	1994	704	1163	590	665	841	4508	7820	156	1649	891	1160	150	2191	4470	1977	1290	112	450	1709
GCF_029542785.1	NC_083377	NC_083377.1	Malassezia japonica chromosome 8; complete sequence.	103040	103952	168061	166276	541329	0.19	0.19	0.31	0.31	0.62	0.9398	0.0097	0.9903	1.9597	191	124	315	82178	76935	143222	139553	441888	0.19	0.18	0.32	0.31	0.63	0.8958	0.1265	0.888	1.9399	187	122	309	78164	72419	137873	134286	422742	0.2	0.18	0.3	0.31	0.61	0.873	0.2472	0.8048	1.9178	3669	3987	4875	4804	17335	0.21	0.24	0.28	0.27	0.55	0.8338	0.3766	0.7058	1.9271	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4	1	5	91	120	101	116	428	0.21	0.28	0.24	0.27	0	0.51	0.8951	0.2096	0.8155	1.9862	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2938	3851	610	740	2796	5499	1940	1196	1547	2072	786	1582	818	4026	862	2172	911	4087	1678	2043	4175	1317	4753	1577	3839	2510	499	1175	618	1072	2570	1334	3281	274	1083	4993	2754	2692	2301	4635	3067	6511	931	5226	2278	641	1264	733	787	918	4420	7761	185	1470	1031	1301	180	2247	4261	2012	1303	106	639	1845
GCF_029542785.1	NC_083378	NC_083378.1	Malassezia japonica chromosome 9; complete sequence.	101380	103209	165139	165638	535366	0.19	0.19	0.31	0.31	0.62	0.9416	0.0104	0.9896	1.9595	134	141	275	86614	80178	146716	140999	454507	0.19	0.18	0.32	0.31	0.63	0.8979	0.1307	0.8838	1.9424	132	139	271	82752	75964	141710	136251	436677	0.2	0.19	0.3	0.31	0.62	0.8684	0.2382	0.8086	1.9239	3673	4020	4791	4514	16998	0.21	0.24	0.28	0.26	0.54	0.8318	0.3555	0.7212	1.9334	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2	1	3	54	71	71	89	285	0.19	0.25	0.25	0.31	0	0.56	0.8949	0.2418	0.7868	1.9763	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2789	4071	638	766	2801	5925	2394	1390	1613	2041	870	1926	650	4092	857	2424	969	3824	1786	1975	4122	1705	4634	1932	4024	2416	561	1207	753	1243	2713	1553	3252	235	1009	5246	3043	2833	2399	4834	3076	6333	942	4972	2134	888	1199	670	819	1261	4414	7396	182	1879	983	1366	154	2142	4397	2331	1617	130	584	1996