GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_035222275.1	NC_085881	NC_085881.1	Podospora bellae-mahoneyi strain CBS 112042 chromosome 2; whole genome shotgun sequence.	1230411	1227189	1330889	1323792	5112281	0.24	0.24	0.26	0.26	0.52	0.9607	0.004	0.996	1.9989	870	856	1726	835083	795372	966237	941071	3537763	0.24	0.22	0.28	0.26	0.54	0.9141	0.1637	0.8567	1.9838	53	815	844	1659	559057	493960	667653	660658	2381328	0.24	0.21	0.28	0.27	0.55	0.8807	0.2906	0.767	1.9529	0	52698	61861	57356	49441	221356	0.24	0.28	0.25	0.22	0.48	0.8424	0.4313	0.6762	1.9247	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	44	0	44	974	939	1087	1094	4094	0.24	0.23	0.27	0.27	0.54	0.8954	0.1983	0.8253	1.9802	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	15647	21511	4528	8809	12273	24665	14626	9226	14802	14918	7369	14396	12581	11485	7993	14797	11027	12877	13169	10811	15259	12366	18379	15035	16975	16504	5419	14445	6549	13929	15440	11166	14230	4555	12138	18153	12327	16819	9691	20860	14749	12173	9894	17303	9858	10479	15974	12559	6661	9463	12679	13187	3566	13161	15771	16572	1891	11254	13573	7291	15667	1632	7963	11455
GCF_035222275.1	NC_085882	NC_085882.1	Podospora bellae-mahoneyi strain CBS 112042 chromosome 3; whole genome shotgun sequence.	929853	929776	1027049	1020027	3906705	0.24	0.24	0.26	0.26	0.52	0.9592	0.0035	0.9965	1.9983	664	656	1320	626684	592880	740136	718917	2678617	0.24	0.22	0.28	0.27	0.54	0.9125	0.1696	0.8514	1.9825	0	614	647	1261	433021	380781	525515	519948	1859265	0.24	0.21	0.28	0.27	0.55	0.8801	0.2982	0.7623	1.952	0	38204	45207	43160	36412	162983	0.24	0.28	0.26	0.22	0.48	0.8382	0.4437	0.6698	1.9192	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	46	0	46	900	967	1045	1053	3965	0.23	0.24	0.26	0.27	0.53	0.8879	0.2313	0.7998	1.9795	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	11958	17431	3308	6603	9222	21332	11498	7115	11834	11293	5716	11473	9142	8976	5794	11940	8443	10380	10229	8614	11785	9608	14806	11968	13963	13833	3989	10976	5086	10420	12458	8567	11533	3309	8825	15319	9596	13579	7551	17318	10901	9555	7558	13986	7406	8378	13117	8818	4774	7384	9868	10303	2606	9893	12151	12449	1405	8534	10879	5419	11919	1165	5181	8437
GCF_035222275.1	NC_085883	NC_085883.1	Podospora bellae-mahoneyi strain CBS 112042 chromosome 4; whole genome shotgun sequence.	952146	957886	992223	992822	3895077	0.24	0.25	0.25	0.25	0.51	0.958	0.0033	0.9967	1.9997	663	575	1238	578490	552515	679609	666444	2477058	0.23	0.22	0.28	0.27	0.54	0.9133	0.1594	0.8598	1.9832	96	599	563	1162	396084	356396	479337	478942	1710759	0.24	0.21	0.27	0.27	0.55	0.8832	0.282	0.7737	1.9548	0	35913	41558	39277	34984	151732	0.24	0.28	0.25	0.23	0.48	0.8429	0.4297	0.6768	1.9259	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	55	0	55	1107	1045	1283	1230	4665	0.24	0.22	0.28	0.26	0.54	0.8886	0.2283	0.802	1.977	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	11193	15308	3110	6426	8887	18196	10404	6515	10770	11119	5445	10163	8810	8448	5743	11010	7800	10004	9561	8065	11169	8563	13234	10930	12179	12542	3724	10614	4762	9703	11286	7839	10646	3246	8549	13349	8632	11970	7036	15416	10471	8671	6955	12790	7083	7802	12422	8125	4860	6923	9135	9739	2431	8973	10907	11327	1288	8093	9878	4994	10414	1167	5068	7529
GCF_035222275.1	NC_085884	NC_085884.1	Podospora bellae-mahoneyi strain CBS 112042 chromosome 5; whole genome shotgun sequence.	1069481	1070509	1131100	1128873	4399963	0.24	0.24	0.26	0.26	0.51	0.9612	0.0015	0.9985	1.9995	779	695	1474	651958	627861	772067	753129	2805015	0.23	0.22	0.28	0.27	0.54	0.9128	0.1572	0.862	1.9831	169	703	685	1388	459546	420422	557753	554348	1992069	0.23	0.22	0.28	0.27	0.55	0.8826	0.2775	0.776	1.9571	0	39616	45919	43526	37788	166849	0.24	0.28	0.25	0.23	0.48	0.8412	0.4342	0.6755	1.9232	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	67	0	67	1290	1257	1536	1498	5581	0.23	0.22	0.28	0.27	0.54	0.8893	0.2315	0.8011	1.9746	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	12772	17110	3661	7307	10383	20807	12369	7782	12293	13261	6203	11944	10057	9420	6318	12438	8894	11261	11487	9680	12931	10218	15862	12950	13742	14182	4500	12305	5677	11699	13448	9782	12387	3782	9900	15989	10542	13855	8390	18042	11400	9961	8100	15057	8573	9410	14207	9218	6042	8767	9920	10973	2893	10135	12139	13019	1517	9362	11173	6008	12708	1341	6188	9271
GCF_035222275.1	NC_085885	NC_085885.1	Podospora bellae-mahoneyi strain CBS 112042 chromosome 6; whole genome shotgun sequence.	988042	988048	1027586	1037937	4041613	0.24	0.24	0.25	0.26	0.51	0.9579	0.005	0.995	1.9996	696	653	1349	616250	588894	713663	702592	2621399	0.24	0.22	0.27	0.27	0.54	0.9134	0.163	0.8576	1.9834	20	652	643	1295	429369	385295	508517	510527	1833708	0.24	0.22	0.28	0.27	0.55	0.8845	0.2814	0.7737	1.9575	0	38120	44877	42558	36256	161811	0.24	0.28	0.26	0.22	0.48	0.8402	0.4301	0.6774	1.9247	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	40	2	42	799	847	937	994	3577	0.22	0.24	0.26	0.28	0.54	0.8863	0.2473	0.7911	1.9716	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	12233	16367	3635	6795	9596	19801	11330	7203	11115	11521	5747	11391	9397	8925	5949	11231	8343	10267	10378	8809	11876	9385	14110	11890	12640	12917	4115	11543	5138	10759	12393	8669	11383	3475	9446	14022	9421	12521	7688	15888	10887	9247	7638	13286	7697	8502	12768	9078	5393	7731	9453	10296	2783	9374	11878	12264	1519	8170	10381	5382	11737	1306	5849	8374
GCF_035222275.1	NC_085886	NC_085886.1	Podospora bellae-mahoneyi strain CBS 112042 chromosome 7; whole genome shotgun sequence.	962238	957991	1035716	1041824	3997769	0.24	0.24	0.26	0.26	0.52	0.9583	0.0052	0.9949	1.9989	685	638	1323	653772	624018	764581	745846	2788217	0.24	0.22	0.28	0.27	0.54	0.9141	0.164	0.8566	1.9835	95	629	628	1257	439747	388726	527763	524449	1880685	0.24	0.21	0.28	0.27	0.55	0.8822	0.286	0.7696	1.9557	0	44203	52044	49777	42418	188442	0.24	0.28	0.25	0.22	0.48	0.8429	0.4262	0.6795	1.9269	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	48	0	48	937	959	1125	1161	4182	0.22	0.23	0.27	0.28	0.55	0.8898	0.2279	0.8047	1.9744	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	12096	18036	3451	6817	9604	21407	11884	7209	11651	11194	5772	11497	9517	8825	5983	11915	9087	10336	10292	8947	11896	9633	14589	12551	14014	13071	4048	11201	5192	10687	12114	8887	11396	3266	8991	14836	9925	13248	7568	17268	11194	9747	7918	13765	7549	8606	12839	9063	5022	7897	9904	10629	2580	10156	12203	12829	1450	8733	10753	5816	12174	1198	5644	8411
GCF_035222275.1	NW_026946358	NW_026946358.1	Podospora bellae-mahoneyi strain CBS 112042 mitochondrion; complete sequence; whole genome shotgun sequence.	31784	30666	11790	14659	88899	0.36	0.34	0.13	0.16	0.3	0.921	0.1264	0.8846	1.8755	50	4	54	26538	25264	9463	12091	73356	0.31	0.34	0.15	0.19	0.35	0.8831	0.231	0.8006	1.9002	2	20	4	24	6455	7258	2292	2907	18912	0.34	0.39	0.12	0.16	0.28	0.8549	0.2965	0.7592	1.8181	2	9004	7952	3089	3888	23933	0.38	0.33	0.13	0.16	0.29	0.8906	0.1844	0.8341	1.8607	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	27	0	27	561	650	342	454	2007	0.28	0.32	0.17	0.23	0.4	0.8849	0.2368	0.7963	1.9484	2	2	1955	1744	809	1111	5619	0.34	0.31	0.14	0.21	0	0.35	0.8907	0.2388	0.7952	1.9165	132	71	180	153	70	42	166	259	26	19	309	173	104	16	193	61	176	25	81	393	20	169	14	177	18	16	95	67	271	105	45	112	15	377	124	25	26	15	55	29	44	13	301	21	11	151	56	108	49	91	19	17	538	114	23	37	21	7	4	27	105	36	72	11