GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_035222485.1	NC_085920	NC_085920.1	Podospora pseudoanserina strain CBS 124.78 chromosome 1; whole genome shotgun sequence.	2118115	2111747	2312647	2313785	8856294	0.24	0.24	0.26	0.26	0.52	0.9605	0.0018	0.9983	1.9986	1476	1414	2890	1448386	1375945	1689098	1628334	6141763	0.24	0.22	0.28	0.26	0.54	0.9151	0.1568	0.8618	1.9847	21	1398	1391	2789	965361	849918	1156928	1132756	4104963	0.24	0.21	0.28	0.27	0.55	0.8812	0.2857	0.7702	1.9554	0	95166	111677	105418	89491	401752	0.24	0.28	0.25	0.22	0.48	0.8448	0.4165	0.686	1.9283	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	62	0	62	1301	1318	1526	1504	5649	0.23	0.23	0.27	0.27	0.54	0.8902	0.2313	0.8009	1.9779	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	26696	38495	7788	15503	21576	43759	25778	16034	25576	24702	13034	25450	21575	20036	13499	26041	19677	22200	23473	18404	26414	20731	31827	26520	30353	29077	8945	24595	11242	23258	26895	19480	24667	7623	20632	31754	20997	28662	16537	36215	25123	20989	17275	30276	16455	18402	25868	20765	10908	16273	22491	23234	5763	22565	26019	28531	3116	19337	23979	12461	26810	2687	12181	19020
GCF_035222485.1	NC_085921	NC_085921.1	Podospora pseudoanserina strain CBS 124.78 chromosome 2; whole genome shotgun sequence.	1235703	1232495	1341079	1333416	5142693	0.24	0.24	0.26	0.26	0.52	0.9609	0.0042	0.9958	1.9988	877	856	1733	848621	808038	983086	955275	3595020	0.24	0.22	0.28	0.26	0.54	0.9139	0.1643	0.8568	1.9832	53	820	847	1667	564660	497964	674830	664958	2402412	0.24	0.21	0.28	0.27	0.55	0.8796	0.2959	0.7641	1.9509	0	55538	64664	60777	52692	233671	0.24	0.28	0.25	0.23	0.48	0.841	0.4368	0.6734	1.9225	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	45	0	45	978	970	1094	1112	4154	0.23	0.23	0.26	0.27	0.53	0.8909	0.1981	0.8253	1.9801	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	15779	21688	4534	8956	12652	24480	14741	9231	14917	15084	7430	14465	12745	11633	7976	14877	11182	12970	13316	10858	15462	12280	18379	15042	17145	16750	5588	14472	6638	14139	15493	11347	14315	4576	12343	18332	12490	16840	9700	21047	14803	12324	10056	17452	9987	10554	15940	12789	6709	9671	12901	13152	3613	13331	15842	16945	1934	11401	13866	7270	15776	1681	8028	11602
GCF_035222485.1	NC_085922	NC_085922.1	Podospora pseudoanserina strain CBS 124.78 chromosome 3; whole genome shotgun sequence.	957334	956743	1058524	1051480	4024081	0.24	0.24	0.26	0.26	0.52	0.9591	0.0036	0.9964	1.9983	685	656	1341	634827	599938	751053	729105	2714923	0.24	0.22	0.28	0.27	0.54	0.9126	0.1698	0.8514	1.9822	0	637	646	1283	439337	385980	533780	527387	1886484	0.24	0.21	0.28	0.27	0.55	0.8801	0.2949	0.7647	1.9517	0	41053	48620	46305	39321	175299	0.24	0.28	0.26	0.22	0.48	0.8398	0.4436	0.6693	1.9206	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	45	0	45	902	923	1039	1023	3887	0.23	0.24	0.27	0.26	0.53	0.8872	0.2314	0.7999	1.9791	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	11926	17608	3411	6603	9413	21704	11643	7115	11908	11572	5789	11753	9297	9081	5792	12046	8509	10460	10309	8706	11946	9730	15056	12146	14066	13915	4054	11069	5138	10698	12556	8684	11766	3359	9060	15464	9878	13673	7719	17585	10944	9742	7682	14138	7660	8553	13209	8935	4874	7607	10076	10374	2569	10228	12125	12748	1453	8733	11079	5597	12151	1193	5324	8730
GCF_035222485.1	NC_085923	NC_085923.1	Podospora pseudoanserina strain CBS 124.78 chromosome 4; whole genome shotgun sequence.	937141	941520	994361	994261	3867283	0.24	0.24	0.26	0.26	0.51	0.9588	0.0024	0.9976	1.9994	659	595	1254	575075	549293	678128	664278	2466774	0.23	0.22	0.28	0.27	0.54	0.9127	0.1619	0.8576	1.9829	47	595	583	1178	396509	355986	481207	479811	1713513	0.24	0.21	0.27	0.27	0.55	0.8827	0.2823	0.7735	1.9539	0	36207	42253	39560	35159	153179	0.24	0.28	0.25	0.23	0.48	0.8435	0.4312	0.6762	1.9253	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	50	0	50	1045	961	1175	1131	4312	0.24	0.22	0.27	0.26	0.54	0.8886	0.2428	0.7903	1.9768	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	11294	15320	3066	6329	8916	18189	10343	6447	10729	11204	5407	10146	8792	8376	5731	11075	7763	10162	9640	7995	11240	8456	13281	10926	12077	12732	3795	10687	4770	9483	11378	7716	10721	3209	8653	13527	8811	12047	7072	15521	10358	8758	7018	12763	7159	7773	12445	8134	4858	6867	9143	9873	2373	8907	11038	11347	1304	8132	10045	4925	10421	1123	5044	7515
GCF_035222485.1	NC_085924	NC_085924.1	Podospora pseudoanserina strain CBS 124.78 chromosome 5; whole genome shotgun sequence.	1155718	1154100	1207802	1204718	4722338	0.24	0.24	0.26	0.26	0.51	0.9612	0.002	0.998	1.9997	813	737	1550	689852	663823	816214	791819	2961708	0.23	0.22	0.28	0.27	0.54	0.9133	0.1564	0.8626	1.9833	169	732	725	1457	482096	441167	585828	577748	2086839	0.24	0.22	0.28	0.27	0.55	0.8839	0.2748	0.7788	1.9569	0	42980	49924	47226	40741	180871	0.24	0.28	0.25	0.23	0.48	0.8423	0.432	0.6763	1.9253	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	68	0	68	1314	1294	1575	1539	5722	0.23	0.23	0.28	0.27	0.55	0.8908	0.2365	0.7971	1.9742	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	13453	17671	3854	7632	10947	21591	12839	8148	12917	13872	6607	12570	10459	9966	6495	13276	9341	11733	12346	10098	13530	10568	16832	13456	14479	14830	4782	12813	5955	12001	14203	10266	13103	3938	10310	17051	11050	14387	8901	18851	11994	10457	8586	15727	8947	9930	14625	9669	6342	9101	10346	11366	3075	10605	12503	13805	1609	9647	11845	6385	13421	1414	6433	9621
GCF_035222485.1	NC_085925	NC_085925.1	Podospora pseudoanserina strain CBS 124.78 chromosome 6; whole genome shotgun sequence.	1008950	1017289	1073616	1084242	4184097	0.24	0.24	0.26	0.26	0.52	0.9582	0.009	0.991	1.9993	713	685	1398	633228	605497	735588	723185	2697498	0.24	0.22	0.27	0.27	0.54	0.9132	0.1618	0.8584	1.9833	86	655	676	1331	445796	401186	529345	529831	1906158	0.24	0.22	0.27	0.27	0.55	0.884	0.2806	0.7746	1.9561	0	40104	46543	43917	37881	168445	0.24	0.28	0.25	0.22	0.48	0.84	0.4294	0.6776	1.9248	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	48	2	50	951	1006	1089	1153	4199	0.22	0.24	0.26	0.28	0.54	0.885	0.2468	0.7889	1.9735	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	12673	16795	3745	7055	9862	20303	11687	7381	11521	11966	6006	11790	9866	9260	6252	11834	8844	10494	10941	9085	12442	9773	14686	12288	13199	13408	4281	11930	5391	11184	12842	9057	11952	3643	9776	14754	9751	12839	7940	16600	11312	9670	7912	13875	8133	8753	13056	9382	5657	8138	9957	10693	2892	9646	12171	12606	1582	8694	10731	5748	12274	1350	6214	8867
GCF_035222485.1	NW_026946670	NW_026946670.1	Podospora pseudoanserina strain CBS 124.78 mitochondrion; complete sequence; whole genome shotgun sequence.	36302	34869	13535	16768	101474	0.36	0.34	0.13	0.17	0.3	0.9194	0.1268	0.8839	1.8769	44	4	48	30922	29295	11153	14159	85529	0.31	0.34	0.15	0.2	0.35	0.8855	0.2132	0.8149	1.9053	1	14	4	18	5623	6465	2011	2554	16653	0.33	0.4	0.12	0.15	0.27	0.8492	0.33	0.7338	1.8077	1	12652	11304	4377	5471	33804	0.38	0.33	0.13	0.16	0.29	0.8931	0.1709	0.8463	1.8611	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	27	0	27	562	647	345	453	2007	0.28	0.32	0.17	0.22	0.4	0.8856	0.2239	0.8062	1.9501	2	2	1970	1756	817	1123	5666	0.35	0.31	0.14	0.2	0	0.34	0.8984	0.2377	0.7942	1.9121	120	58	163	136	63	33	147	230	23	13	279	144	83	16	163	44	145	24	71	361	27	147	12	141	16	13	82	61	244	100	41	102	15	336	105	19	23	14	49	24	35	9	250	19	13	127	50	97	41	76	17	19	487	109	24	34	27	3	5	19	92	34	62	10