GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_035222375.1	NC_085887	NC_085887.1	Podospora pseudocomata strain CBS 415.72m chromosome 3; whole genome shotgun sequence.	971704	971375	1099307	1095918	4138304	0.23	0.23	0.27	0.26	0.53	0.957	0.0017	0.9983	1.9973	675	678	1353	655477	618539	774900	754179	2803095	0.24	0.22	0.28	0.27	0.55	0.9125	0.1695	0.8517	1.9818	0	623	668	1291	447512	392271	542882	538523	1921188	0.24	0.21	0.28	0.27	0.55	0.8805	0.2924	0.7658	1.9516	0	41354	48120	46288	39613	175375	0.24	0.28	0.26	0.22	0.48	0.8394	0.4379	0.673	1.9211	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	46	0	46	927	934	1050	1054	3965	0.23	0.23	0.27	0.27	0.53	0.8856	0.2282	0.8022	1.9796	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	12175	17887	3460	6748	9665	22062	11806	7233	12188	11809	5879	11896	9425	9269	5973	12283	8624	10660	10477	8772	12192	9797	15331	12403	14382	14031	4134	11239	5228	10962	12796	8870	11940	3419	9199	15867	9920	13867	7796	17823	11243	10019	7828	14423	7767	8565	13578	9139	5010	7719	10225	10708	2693	10248	12555	12932	1482	8992	11361	5608	12262	1265	5486	8892
GCF_035222375.1	NC_085888	NC_085888.1	Podospora pseudocomata strain CBS 415.72m chromosome 4; whole genome shotgun sequence.	889839	892887	994153	995509	3772388	0.24	0.24	0.26	0.26	0.53	0.9579	0.0024	0.9976	1.9978	667	573	1240	572892	547888	675859	662347	2458986	0.23	0.22	0.28	0.27	0.54	0.9128	0.1627	0.8575	1.9826	47	610	561	1171	391808	352246	475886	474247	1694187	0.24	0.21	0.27	0.27	0.55	0.8821	0.2824	0.7733	1.9545	0	35579	41510	39308	34215	150612	0.24	0.28	0.25	0.23	0.48	0.8451	0.4281	0.6774	1.9268	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	47	0	47	979	905	1111	1063	4058	0.24	0.22	0.28	0.26	0.54	0.8907	0.2602	0.7767	1.9757	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	11089	15161	3032	6376	8793	17950	10302	6448	10585	11040	5287	10129	8631	8271	5597	10955	7727	9998	9478	7918	11076	8474	13188	10810	11987	12556	3665	10578	4679	9516	11271	7701	10592	3148	8530	13261	8626	11907	6983	15481	10353	8617	6831	12608	7092	7759	12180	8065	4733	6824	9050	9680	2313	8855	10809	11178	1268	8078	9795	4961	10374	1114	5017	7538
GCF_035222375.1	NC_085889	NC_085889.1	Podospora pseudocomata strain CBS 415.72m chromosome 5; whole genome shotgun sequence.	1108934	1111299	1233024	1226288	4679545	0.24	0.24	0.26	0.26	0.53	0.9603	0.0038	0.9962	1.9981	851	743	1594	707390	678864	831962	811242	3029458	0.23	0.22	0.27	0.27	0.54	0.9132	0.156	0.8627	1.9836	164	780	731	1511	502758	458671	605363	601188	2167980	0.24	0.22	0.27	0.27	0.55	0.8842	0.273	0.7793	1.9582	0	44953	51817	49058	42618	188446	0.24	0.28	0.25	0.23	0.48	0.8426	0.4241	0.6805	1.9278	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	65	0	65	1263	1240	1516	1486	5505	0.23	0.22	0.28	0.27	0.55	0.8892	0.2394	0.7944	1.9739	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	14082	18625	4100	7976	11441	22338	13210	8460	13290	14626	6891	12925	11067	10633	6952	13682	9723	12213	12753	10471	14139	10856	17250	14052	15047	15369	4992	13493	6160	12432	14904	10617	13483	4178	10799	17468	11483	14708	9204	19230	12606	10906	9090	16046	9364	10235	15247	10159	6583	9383	11012	11859	3241	10769	13332	14146	1729	9989	12177	6440	13777	1445	6656	10065
GCF_035222375.1	NC_085890	NC_085890.1	Podospora pseudocomata strain CBS 415.72m chromosome 6; whole genome shotgun sequence.	996085	998169	1097768	1107128	4199150	0.24	0.24	0.26	0.26	0.53	0.9606	0.0053	0.9947	1.9982	711	690	1401	646298	617467	749306	737934	2751005	0.24	0.22	0.27	0.27	0.54	0.9131	0.1615	0.8584	1.9837	86	659	680	1339	455490	409785	539833	542084	1947192	0.24	0.22	0.27	0.27	0.55	0.8845	0.2788	0.7756	1.9567	0	40653	47687	44814	38766	171920	0.24	0.28	0.25	0.22	0.48	0.8422	0.4228	0.6814	1.9278	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	47	2	49	925	975	1097	1147	4144	0.22	0.23	0.27	0.28	0.55	0.884	0.244	0.7913	1.972	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	12999	17010	3852	7112	10268	20548	11815	7588	11775	12352	6090	11977	10016	9542	6362	11920	8970	10706	11156	9235	12648	9935	14926	12578	13405	13623	4462	12264	5496	11529	13136	9315	12116	3847	10056	15034	9998	13089	8106	16742	11653	9890	8151	14322	8405	8970	13484	9651	5855	8346	10102	10908	2985	9788	12590	12813	1616	8858	11033	5794	12489	1362	6272	9137
GCF_035222375.1	NC_085891	NC_085891.1	Podospora pseudocomata strain CBS 415.72m chromosome 7; whole genome shotgun sequence.	964038	958504	1068864	1074034	4065440	0.24	0.24	0.26	0.26	0.53	0.9584	0.0053	0.9947	1.9979	708	663	1371	668055	635281	781609	761374	2846319	0.24	0.22	0.28	0.27	0.54	0.9139	0.1647	0.8557	1.9836	159	653	654	1307	453323	400565	544244	540855	1938987	0.24	0.21	0.28	0.27	0.55	0.8818	0.2882	0.7688	1.9549	0	42718	50442	48072	41247	182479	0.24	0.28	0.25	0.22	0.48	0.842	0.4297	0.6774	1.925	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	50	0	50	977	1004	1178	1203	4362	0.22	0.23	0.27	0.28	0.55	0.8883	0.241	0.7947	1.9733	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	12437	18647	3540	7128	9896	22143	12182	7454	11966	11668	5964	11813	9860	9247	6128	12337	9391	10633	10648	9130	12320	9842	14996	12904	14611	13464	4218	11609	5358	10884	12465	9122	11716	3387	9328	15285	10298	13590	7841	17872	11559	10074	8174	14210	7790	8855	13238	9271	5186	8048	10266	11002	2650	10497	12500	13078	1476	9035	11045	5984	12414	1229	5779	8716
GCF_035222375.1	NW_026946362	NW_026946362.1	Podospora pseudocomata strain CBS 415.72m mitochondrion; complete sequence; whole genome shotgun sequence.	30345	29495	11272	14006	85118	0.36	0.35	0.13	0.16	0.3	0.9219	0.1224	0.8884	1.8749	44	5	49	24952	23876	8827	11332	68987	0.31	0.34	0.15	0.19	0.34	0.8822	0.225	0.8052	1.898	1	14	5	19	5843	6659	2041	2617	17160	0.34	0.39	0.12	0.15	0.27	0.852	0.3073	0.7488	1.8111	1	8414	7351	2808	3562	22135	0.38	0.33	0.13	0.16	0.29	0.8901	0.1884	0.8315	1.8575	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	27	0	27	561	646	345	455	2007	0.28	0.32	0.17	0.23	0.4	0.8851	0.2281	0.8027	1.9504	2	2	2046	1841	846	1149	5882	0.34	0.31	0.14	0.2	0	0.34	0.9093	0.2053	0.8205	1.9169	123	56	168	136	68	39	160	247	22	11	299	148	91	16	174	47	150	24	78	366	23	157	11	155	16	12	83	66	238	101	42	104	16	348	112	17	21	13	46	26	34	5	264	19	10	127	45	102	43	78	15	21	506	109	22	34	21	3	5	19	100	31	66	8