GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_N Number of 'N' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_000002495.2	NC_017844	NC_017844.1	Pyricularia oryzae 70-15 chromosome 1; whole genome shotgun sequence.	1939337	1947575	2039350	2042942	9400	7978604	0.24	0.24	0.26	0.26	0.51	0.9603	0.003	0.997	1.9989	1253	1226	2479	1135445	1058211	1317500	1233984	400	4745540	0.24	0.22	0.27	0.26	0.54	0.9156	0.1408	0.8742	1.9835	2183	1202	1177	2379	706272	596963	895782	859069	3058086	0.24	0.21	0.28	0.27	0.55	0.8796	0.2708	0.7809	1.9495	126565	134612	119514	106937	400	488028	0.26	0.28	0.24	0.22	0.46	0.8711	0.3316	0.7349	1.9491	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	13	20	33	610	767	765	888	3030	0.2	0.25	0.25	0.29	0.55	0.8892	0.2207	0.8099	1.9755	1	2	3	78	79	98	93	348	0.22	0.23	0.28	0.27	0.55	0.9099	0.0324	0.9684	1.9927	19655	27120	6101	11001	19978	30806	18119	9951	15986	17704	8830	16686	14967	17885	8629	19944	12855	15436	16631	12750	22850	14434	21001	17159	24073	20673	7214	14425	7174	15929	19229	13201	21371	6846	14761	28451	16194	19135	13841	31982	21104	20732	12853	29283	14092	11012	13677	12999	7087	11849	19942	20955	4266	15014	17774	19000	2518	16185	20826	10864	19061	2234	7916	15324
GCF_000002495.2	NC_017850	NC_017850.1	Pyricularia oryzae 70-15 chromosome 2; whole genome shotgun sequence.	2000155	2006505	2152505	2157701	3100	8319966	0.24	0.24	0.26	0.26	0.52	0.9614	0.0028	0.9972	1.9988	1338	1269	2607	1317890	1239578	1539761	1439733	100	5537062	0.24	0.22	0.28	0.26	0.54	0.9174	0.1341	0.8793	1.9853	2010	1288	1235	2523	806385	685624	1031967	988631	3512607	0.24	0.21	0.28	0.28	0.55	0.8792	0.2702	0.7824	1.9495	136290	146876	131093	117396	100	531755	0.26	0.28	0.24	0.22	0.46	0.8739	0.3189	0.7433	1.9536	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	17	11	28	597	708	677	804	2786	0.21	0.25	0.24	0.29	0.53	0.887	0.2234	0.8069	1.9787	3	3	6	155	154	199	188	696	0.22	0.22	0.29	0.27	0.56	0.9099	0.0382	0.9628	1.9904	22902	30799	7379	12853	23732	35180	21307	10948	18637	20346	9604	18362	18166	20921	10210	22358	15250	17698	18968	14433	26577	16291	24061	19865	27746	23429	8392	16354	7919	18498	21696	15144	24439	7973	17247	31822	18323	21752	15197	36970	24524	23498	14230	33341	15910	12429	15612	14980	8318	13824	23532	24219	4417	17611	20542	22408	2907	18821	24141	12753	21464	2411	9433	17748
GCF_000002495.2	NC_017849	NC_017849.1	Pyricularia oryzae 70-15 chromosome 3; whole genome shotgun sequence.	1596211	1599532	1698749	1706906	5200	6606598	0.24	0.24	0.26	0.26	0.52	0.9591	0.0034	0.9966	1.9988	1049	1076	2125	970273	919726	1141554	1075608	0	4107161	0.24	0.22	0.28	0.26	0.54	0.916	0.1309	0.8821	1.9842	2336	997	1033	2030	607355	528137	786026	756000	2677518	0.24	0.21	0.28	0.28	0.56	0.8809	0.2592	0.7894	1.9532	101586	110905	97762	87846	0	398099	0.26	0.28	0.24	0.22	0.46	0.8723	0.3301	0.7357	1.9515	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	20	15	35	684	852	736	897	3169	0.22	0.27	0.23	0.28	0.52	0.8929	0.2203	0.8075	1.9816	4	4	8	207	206	266	249	928	0.22	0.22	0.29	0.27	0.55	0.9085	0.0403	0.9609	1.9907	17559	23084	5375	9516	17720	26705	15931	8650	13621	16130	7275	13699	12711	15685	7280	17035	10905	13893	14935	11480	21165	12581	19082	14830	20336	17897	6351	12593	6265	14339	17513	11916	19490	5943	12480	24654	14163	16605	12540	28591	18223	18380	10294	26334	12569	9791	12264	10905	6504	10826	16945	18554	3458	13078	15254	16186	2142	14099	17892	9486	16511	1927	7247	13522
GCF_000002495.2	NC_017851	NC_017851.1	Pyricularia oryzae 70-15 chromosome 4; whole genome shotgun sequence.	1333527	1336645	1436408	1437388	3000	5546968	0.24	0.24	0.26	0.26	0.52	0.9621	0.0015	0.9985	1.9987	899	916	1815	886933	831906	1035941	972353	0	3727133	0.24	0.22	0.28	0.26	0.54	0.9167	0.1346	0.8791	1.9839	861	860	875	1735	552310	470281	707762	679169	2409522	0.24	0.21	0.28	0.28	0.56	0.8805	0.2583	0.79	1.9519	89049	97354	84288	75098	0	345789	0.26	0.28	0.24	0.21	0.46	0.8717	0.334	0.7333	1.9497	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	14	21	35	688	877	767	930	3262	0.21	0.27	0.23	0.29	0.52	0.8938	0.2424	0.7924	1.9777	2	4	6	158	150	189	181	678	0.23	0.22	0.28	0.27	0.55	0.9062	0.0489	0.9545	1.9925	15606	21502	4975	8664	16390	24383	14601	7811	12670	13859	6824	12951	12016	14059	6782	15751	10120	12746	13301	10011	18658	11663	16872	13873	19219	16156	5485	10949	5549	12422	15473	10517	17158	5419	11711	22695	12649	14787	10995	25752	16766	16086	9439	23779	10498	8782	10750	9665	5482	9231	15427	16764	2933	12064	13801	14649	1832	12405	16455	8016	14877	1563	5858	11708
GCF_000002495.2	NC_017852	NC_017852.1	Pyricularia oryzae 70-15 chromosome 5; whole genome shotgun sequence.	1081523	1076189	1167666	1162281	2400	4490059	0.24	0.24	0.26	0.26	0.52	0.962	0.0048	0.9952	1.9986	738	747	1485	710632	665772	836855	788010	200	3001469	0.24	0.22	0.28	0.26	0.54	0.9169	0.1394	0.8751	1.9845	1005	712	717	1429	439391	372683	569738	549645	1931457	0.24	0.21	0.28	0.28	0.56	0.8803	0.2701	0.7822	1.9497	76274	83272	73537	65350	200	298633	0.26	0.28	0.24	0.22	0.46	0.873	0.3311	0.7351	1.9505	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	11	11	22	439	542	483	565	2029	0.22	0.27	0.24	0.28	0.52	0.8912	0.1948	0.8281	1.9852	3	5	8	207	207	265	249	928	0.22	0.22	0.29	0.27	0.55	0.9092	0.0311	0.9698	1.9911	12578	17343	3787	6926	12740	20289	11570	6047	10178	11103	5235	10236	9104	11569	5282	12878	7742	10325	10502	8029	15127	9047	13763	11029	15252	13139	4373	8605	4217	10270	12408	7994	14002	4166	9045	18985	10297	12150	9054	20982	13349	13335	7211	19400	8746	6820	8805	7500	4428	7030	12747	13719	2312	9221	10960	11523	1477	10277	13015	6597	11656	1205	4737	9264
GCF_000002495.2	NC_017853	NC_017853.1	Pyricularia oryzae 70-15 chromosome 6; whole genome shotgun sequence.	998399	999413	1064016	1068965	3200	4133993	0.24	0.24	0.26	0.26	0.52	0.9552	0.0028	0.9972	1.9988	647	667	1314	590095	553468	704660	662978	0	2511201	0.24	0.22	0.28	0.26	0.54	0.9154	0.1353	0.8785	1.9824	1146	624	644	1268	384958	333811	502665	481981	1703415	0.23	0.21	0.28	0.28	0.56	0.8813	0.2587	0.7905	1.9512	61056	66723	58770	51770	0	238319	0.26	0.28	0.24	0.21	0.46	0.8712	0.3324	0.7345	1.9489	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8	8	16	288	388	364	424	1464	0.19	0.26	0.25	0.29	0.54	0.8878	0.2356	0.7981	1.9712	1	1	2	52	51	67	62	232	0.22	0.22	0.29	0.27	0.56	0.9099	0.0485	0.9532	1.9902	11168	14307	3457	6020	11354	16390	10086	5452	9134	10557	4706	8694	8419	10154	4797	10777	6923	8900	9405	7214	13282	7740	12126	9102	13298	11508	4081	8035	3764	8602	10838	7382	12256	3689	8004	15472	9146	10531	7723	18072	11975	11770	6838	17082	8340	5993	7988	7205	4093	6740	10946	12017	2200	8201	9850	10332	1455	9409	11803	6075	10177	1121	4336	8334
GCF_000002495.2	NC_017854	NC_017854.1	Pyricularia oryzae 70-15 chromosome 7; whole genome shotgun sequence.	832778	829395	875557	875155	2900	3415785	0.24	0.24	0.26	0.26	0.51	0.9594	0.0023	0.9977	1.999	525	551	1076	465715	437458	550644	517706	0	1971523	0.24	0.22	0.28	0.26	0.54	0.914	0.1395	0.8755	1.9824	634	494	524	1018	286121	242437	372920	357820	1259298	0.24	0.21	0.28	0.28	0.56	0.8787	0.275	0.7788	1.9493	56042	60469	52960	48191	0	217662	0.26	0.28	0.24	0.22	0.46	0.872	0.3352	0.7329	1.9499	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	11	8	19	347	442	428	493	1710	0.2	0.26	0.25	0.29	0.54	0.8901	0.2274	0.8078	1.9736	2	5	7	181	181	232	218	812	0.22	0.22	0.29	0.27	0.55	0.9051	0.0586	0.944	1.9904	8267	11248	2369	4293	8216	13010	7231	4029	6686	7266	3559	6356	5685	7325	3442	8323	4921	6867	6965	5277	9702	5674	8884	6854	10433	8665	2792	5452	2811	6736	8346	5238	9425	2583	5772	11987	6756	8155	5831	13967	8775	8637	4881	12687	5754	4479	6065	4916	2827	4816	8142	8946	1549	6125	7029	7603	1041	6752	8554	4211	7766	858	3064	6098