Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of āGā + āCā nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
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GCF_004337985.1 | NC_043740 | NC_043740.1 | Pyricularia pennisetigena strain Br36 chromosome 1; whole genome shotgun sequence. | 1449003 | 1448126 | 1252717 | 1250478 | 38156 | 5438480 | 0.27 | 0.27 | 0.23 | 0.23 | 0.01 | 0.46 | 0.9599 | 0.0012 | 0.9988 | 1.9922 | 581 | 573 | 1154 | 471583 | 418793 | 577264 | 545601 | 7533 | 2020774 | 0.23 | 0.2 | 0.29 | 0.27 | 0 | 0.56 | 0.9108 | 0.1651 | 0.8548 | 1.9708 | 0 | 548 | 556 | 1104 | 365808 | 308981 | 473229 | 451246 | 0 | 1599264 | 0.23 | 0.21 | 0.28 | 0.28 | 0 | 0.56 | 0.8838 | 0.2538 | 0.7912 | 1.9556 | 0 | 79722 | 86598 | 72965 | 65674 | 5209 | 310168 | 0.26 | 0.28 | 0.24 | 0.21 | 0 | 0.46 | 0.8673 | 0.3502 | 0.7234 | 1.9381 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 10288 | 14187 | 3108 | 5803 | 10573 | 16185 | 9744 | 4778 | 8373 | 8986 | 4395 | 8335 | 8031 | 9275 | 4507 | 10609 | 6879 | 7835 | 8693 | 6142 | 11962 | 7560 | 11287 | 9024 | 12914 | 10657 | 3825 | 7054 | 3664 | 8215 | 10178 | 6851 | 11371 | 3393 | 7474 | 14747 | 8463 | 9854 | 7226 | 17209 | 11278 | 11067 | 6164 | 15907 | 7273 | 5720 | 7112 | 6867 | 3608 | 6485 | 10564 | 10996 | 1957 | 7926 | 9171 | 9776 | 1299 | 8750 | 11193 | 5977 | 9861 | 1079 | 4290 | 8245 |
GCF_004337985.1 | NC_043741 | NC_043741.1 | Pyricularia pennisetigena strain Br36 chromosome 2; whole genome shotgun sequence. | 2004709 | 2001989 | 1994185 | 1993905 | 64887 | 8059675 | 0.25 | 0.25 | 0.25 | 0.25 | 0.01 | 0.49 | 0.9623 | 0.0007 | 0.9993 | 1.9955 | 1104 | 1058 | 2162 | 897022 | 795593 | 1113439 | 1055252 | 6718 | 3868024 | 0.23 | 0.2 | 0.29 | 0.27 | 0 | 0.56 | 0.9124 | 0.154 | 0.8636 | 1.9725 | 0 | 1052 | 1020 | 2072 | 727185 | 616565 | 942737 | 901472 | 114 | 3188073 | 0.23 | 0.2 | 0.28 | 0.28 | 0 | 0.56 | 0.884 | 0.248 | 0.7964 | 1.9557 | 0 | 131146 | 143924 | 123530 | 109511 | 6359 | 514470 | 0.25 | 0.28 | 0.24 | 0.21 | 0 | 0.46 | 0.8706 | 0.337 | 0.7321 | 1.9428 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 20440 | 27983 | 6429 | 11595 | 21571 | 32234 | 19508 | 9454 | 17094 | 17910 | 8589 | 16659 | 16319 | 19197 | 9050 | 20228 | 13857 | 15888 | 17416 | 12157 | 24333 | 14832 | 22322 | 18271 | 25738 | 20886 | 7454 | 14531 | 7181 | 16579 | 19820 | 13745 | 22733 | 7094 | 15262 | 29357 | 16681 | 19464 | 13392 | 34123 | 22375 | 21740 | 12435 | 31293 | 13806 | 11258 | 14100 | 13506 | 7205 | 12822 | 21785 | 22211 | 3786 | 16208 | 18586 | 20001 | 2603 | 17601 | 22413 | 11828 | 19410 | 2088 | 8343 | 16251 |
GCF_004337985.1 | NC_043742 | NC_043742.1 | Pyricularia pennisetigena strain Br36 chromosome 3; whole genome shotgun sequence. | 2302973 | 2293038 | 1924631 | 1919211 | 39020 | 8478873 | 0.27 | 0.27 | 0.23 | 0.23 | 0 | 0.45 | 0.9509 | 0.0036 | 0.9964 | 1.9917 | 887 | 890 | 1777 | 766605 | 700298 | 908491 | 864578 | 6278 | 3246250 | 0.23 | 0.21 | 0.29 | 0.27 | 0 | 0.56 | 0.9112 | 0.1511 | 0.8657 | 1.9722 | 0 | 844 | 855 | 1699 | 566017 | 491196 | 742144 | 711986 | 5 | 2511348 | 0.23 | 0.21 | 0.28 | 0.28 | 0 | 0.56 | 0.8841 | 0.2426 | 0.7995 | 1.9542 | 0 | 173902 | 184403 | 135871 | 124260 | 6196 | 624632 | 0.26 | 0.28 | 0.24 | 0.21 | 0 | 0.45 | 0.8691 | 0.3441 | 0.7275 | 1.9384 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 15988 | 21470 | 5032 | 8652 | 16355 | 24872 | 15223 | 7841 | 12888 | 14932 | 6699 | 12859 | 12008 | 15060 | 6842 | 16071 | 10134 | 12767 | 14193 | 10176 | 19775 | 11660 | 18135 | 13878 | 19436 | 16643 | 5684 | 11419 | 5865 | 13284 | 16300 | 11196 | 18609 | 5404 | 11515 | 23082 | 13292 | 15020 | 11339 | 27426 | 16921 | 17609 | 9730 | 25507 | 11907 | 9009 | 11230 | 10229 | 6000 | 10301 | 16085 | 17785 | 3142 | 12481 | 14167 | 15089 | 2010 | 13895 | 17350 | 9418 | 15105 | 1736 | 6773 | 13279 |
GCF_004337985.1 | NC_043743 | NC_043743.1 | Pyricularia pennisetigena strain Br36 chromosome 5; whole genome shotgun sequence. | 1131134 | 1133838 | 1093967 | 1091720 | 25527 | 4476186 | 0.25 | 0.25 | 0.24 | 0.24 | 0.01 | 0.49 | 0.9611 | 0.0022 | 0.9978 | 1.9966 | 582 | 572 | 1154 | 484016 | 430984 | 595184 | 568428 | 3238 | 2081850 | 0.23 | 0.2 | 0.29 | 0.28 | 0 | 0.57 | 0.9117 | 0.1579 | 0.8604 | 1.971 | 0 | 553 | 554 | 1107 | 379572 | 318949 | 497325 | 479117 | 0 | 1674963 | 0.23 | 0.2 | 0.29 | 0.28 | 0 | 0.57 | 0.884 | 0.2482 | 0.796 | 1.9551 | 0 | 82267 | 91812 | 71274 | 64201 | 3189 | 312743 | 0.26 | 0.29 | 0.24 | 0.21 | 0 | 0.45 | 0.8695 | 0.3387 | 0.7309 | 1.942 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 10679 | 14979 | 3189 | 5896 | 11106 | 17690 | 10041 | 4995 | 8999 | 9488 | 4509 | 8875 | 7989 | 10477 | 4582 | 11184 | 6840 | 8642 | 9212 | 6462 | 13276 | 7784 | 11954 | 9470 | 13336 | 11061 | 3648 | 7077 | 3638 | 8773 | 10660 | 6728 | 12274 | 3536 | 7750 | 16691 | 8903 | 10290 | 7585 | 18346 | 11615 | 11912 | 6290 | 17103 | 7597 | 5741 | 7554 | 6555 | 3647 | 6158 | 11376 | 12183 | 1912 | 8068 | 9688 | 9986 | 1180 | 9379 | 11891 | 5864 | 9906 | 1036 | 4148 | 8094 |
GCF_004337985.1 | NC_043744 | NC_043744.1 | Pyricularia pennisetigena strain Br36 chromosome 6; whole genome shotgun sequence. | 1697417 | 1696927 | 1570535 | 1566863 | 30244 | 6561986 | 0.26 | 0.26 | 0.24 | 0.24 | 0 | 0.48 | 0.9589 | 0.0013 | 0.9987 | 1.9963 | 837 | 758 | 1595 | 655518 | 587598 | 827792 | 788971 | 10540 | 2870419 | 0.23 | 0.2 | 0.29 | 0.28 | 0 | 0.57 | 0.9118 | 0.1548 | 0.8629 | 1.9695 | 0 | 804 | 740 | 1544 | 532907 | 456792 | 705007 | 679239 | 18 | 2373963 | 0.23 | 0.2 | 0.29 | 0.28 | 0 | 0.57 | 0.8856 | 0.2379 | 0.8028 | 1.9556 | 0 | 98783 | 108938 | 93717 | 82389 | 10519 | 394346 | 0.26 | 0.28 | 0.24 | 0.21 | 0.01 | 0.45 | 0.8667 | 0.3545 | 0.7202 | 1.9369 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 14973 | 20028 | 4594 | 8238 | 15713 | 23446 | 14166 | 6945 | 12382 | 14075 | 6180 | 12235 | 11665 | 14551 | 6677 | 14812 | 9444 | 11861 | 13006 | 9182 | 18526 | 10965 | 17073 | 12900 | 18814 | 15336 | 5431 | 10635 | 5184 | 12124 | 15159 | 10223 | 17471 | 5001 | 10957 | 22173 | 12691 | 14238 | 10385 | 25732 | 16770 | 17335 | 8941 | 24313 | 11229 | 8448 | 11118 | 10124 | 5477 | 9578 | 15821 | 17282 | 2837 | 11562 | 14120 | 14541 | 1915 | 13748 | 17113 | 8777 | 13917 | 1492 | 6273 | 12192 |