GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_009556855.1	NC_072348	NC_072348.1	Talaromyces marneffei chromosome 1; complete sequence.	1710487	1711709	1521080	1520729	6464005	0.26	0.26	0.24	0.24	0.47	0.9643	0.0005	0.9995	1.9975	1158	1190	2348	1057838	976129	999460	962579	3996006	0.26	0.24	0.25	0.24	0.49	0.92	0.1377	0.8765	1.992	1153	1188	2341	955630	858525	916885	885703	3616743	0.26	0.24	0.25	0.25	0.5	0.8867	0.2542	0.7934	1.968	95996	112100	76632	71143	355871	0.27	0.32	0.21	0.2	0.41	0.8451	0.3354	0.7318	1.9342	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5	2	7	106	147	124	157	534	0.2	0.27	0.23	0.29	0.52	0.8788	0.3463	0.7118	1.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	25359	28065	9767	17385	23194	27070	23176	21710	18994	20439	21033	31885	22224	16600	14319	21447	20765	16359	22435	18683	18746	17321	22328	29165	23123	19133	13222	24268	16711	20568	24204	19923	20354	13522	21405	23831	14959	15207	15931	21635	18837	16136	24542	19504	14208	17792	11580	19093	11256	19039	19536	16698	10366	18444	13736	21568	4988	13045	16492	13353	28475	4541	13156	20572
GCF_009556855.1	NC_072349	NC_072349.1	Talaromyces marneffei chromosome 2; complete sequence.	1053799	1056561	922564	921402	3954326	0.27	0.27	0.23	0.23	0.47	0.9609	0.0019	0.9981	1.9967	683	724	1407	616695	566066	573168	561598	2317527	0.26	0.24	0.25	0.24	0.49	0.9189	0.1422	0.8727	1.991	680	719	1399	554305	495442	524571	514783	2089101	0.27	0.24	0.25	0.25	0.49	0.8867	0.2562	0.7918	1.9683	57877	66685	44465	42526	211553	0.28	0.32	0.21	0.2	0.41	0.8432	0.3382	0.7303	1.9314	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3	5	8	118	156	157	188	619	0.19	0.25	0.25	0.3	0.56	0.8882	0.2347	0.8002	1.9652	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	15096	16882	5574	10170	13587	16141	13285	12818	10588	12001	12233	18535	12745	9569	8157	12461	11525	9704	12975	10900	10742	10035	12539	17406	13170	11087	7791	14254	9633	12467	14219	11310	11572	7889	12377	13970	8492	8719	8979	12272	10747	9294	14413	11570	8139	10466	6869	10654	6470	10829	10814	9419	6096	10463	7937	12711	2696	7554	9363	7617	15838	2623	7215	11431
GCF_009556855.1	NC_072350	NC_072350.1	Talaromyces marneffei chromosome 3; complete sequence.	982252	984849	866438	870471	3704010	0.27	0.27	0.23	0.24	0.47	0.9615	0.0036	0.9964	1.9972	648	650	1298	574256	532829	543220	524195	2174500	0.26	0.24	0.25	0.24	0.49	0.9203	0.1357	0.8779	1.992	644	649	1293	513145	463284	494389	478627	1949445	0.26	0.24	0.25	0.25	0.49	0.8859	0.2564	0.7915	1.9678	57604	66459	45237	42244	211544	0.27	0.32	0.21	0.2	0.41	0.845	0.339	0.7293	1.9323	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3	1	4	70	87	87	104	348	0.2	0.25	0.25	0.3	0.55	0.897	0.2044	0.8214	1.9822	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	13680	15336	5153	9281	12379	14494	12125	11711	10365	11164	11329	16544	12119	9088	7576	11645	11286	8885	12104	10078	10276	9521	11788	15385	12026	10279	7157	13287	9113	11193	13122	10656	10840	7143	11435	12568	8081	8408	8602	11319	9919	8797	13127	10539	7800	9415	6255	10308	6319	10309	10446	9188	5579	9731	7666	11942	2664	7312	9221	7185	14936	2578	7335	11400
GCF_009556855.1	NC_072351	NC_072351.1	Talaromyces marneffei chromosome 4; complete sequence.	957902	956984	843603	844321	3602810	0.27	0.27	0.23	0.23	0.47	0.9613	0.0009	0.9991	1.9971	628	639	1267	584579	531184	543529	528197	2187489	0.27	0.24	0.25	0.24	0.49	0.9189	0.1417	0.8736	1.9908	623	633	1256	529608	468244	500433	487601	1985886	0.27	0.24	0.25	0.25	0.49	0.8859	0.2601	0.7885	1.9665	52234	60368	40515	37803	190920	0.28	0.32	0.21	0.2	0.41	0.845	0.3385	0.7294	1.9303	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5	6	11	158	215	203	261	837	0.19	0.26	0.24	0.31	0.56	0.8974	0.28	0.7681	1.9594	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	13950	15755	5314	9654	12755	15186	12368	11788	10386	11130	11715	17673	12349	8818	7997	11643	11513	8987	11962	9946	10162	9428	11846	16287	12616	10519	7202	13321	9227	11483	13390	10707	10725	7543	12047	13041	8186	8297	8556	11538	10176	8997	13784	10800	7915	9573	6462	10874	6249	10589	10556	9064	5614	9924	7797	12070	2685	7307	9020	7322	15640	2574	7437	11337
GCF_009556855.1	NC_072352	NC_072352.1	Talaromyces marneffei chromosome 5; complete sequence.	886034	885185	770913	770048	3312180	0.27	0.27	0.23	0.23	0.47	0.9618	0.001	0.999	1.9965	587	593	1180	503790	476268	476708	462813	1919579	0.26	0.25	0.25	0.24	0.49	0.9194	0.1373	0.8771	1.9914	582	591	1173	449885	415168	434139	422817	1722009	0.26	0.25	0.25	0.25	0.49	0.886	0.2525	0.7955	1.967	49969	57430	38548	36340	182287	0.28	0.32	0.21	0.2	0.41	0.843	0.3427	0.727	1.9312	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5	2	7	115	155	147	162	579	0.2	0.27	0.25	0.28	0.53	0.8874	0.2449	0.7897	1.982	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	12339	13031	4904	8274	11049	12695	10732	10808	9089	10270	10071	14489	10535	7840	6544	10297	9692	8220	10872	9180	9235	8717	10599	13878	10467	9415	6430	12054	8031	10222	11725	9612	9654	6478	10090	11363	7215	7214	7576	10346	8498	7217	11290	9503	6854	8965	5630	8620	5678	9324	8977	8077	5131	8508	6472	10255	2135	6201	7782	6260	13080	2183	5933	9076
GCF_009556855.1	NC_072353	NC_072353.1	Talaromyces marneffei chromosome 6; complete sequence.	861944	860104	757087	756852	3235987	0.27	0.27	0.23	0.23	0.47	0.9613	0.0012	0.9988	1.997	612	530	1142	506456	470824	476724	464768	1918772	0.26	0.25	0.25	0.24	0.49	0.9196	0.1399	0.8747	1.9914	605	528	1133	457814	416476	438574	428714	1741578	0.26	0.24	0.25	0.25	0.49	0.8877	0.2532	0.794	1.9683	45913	51973	35657	33348	166891	0.28	0.31	0.21	0.2	0.41	0.8451	0.3388	0.7298	1.9323	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	7	2	9	135	170	157	204	666	0.2	0.25	0.24	0.31	0.54	0.8865	0.3594	0.71	1.9568	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	12466	13116	4841	8584	11164	13161	11123	10739	9085	10339	10221	15031	10682	7946	6874	10243	10089	7989	10802	9164	9001	8646	10370	14289	10787	9305	6289	11643	8239	10339	11659	9434	9761	6639	10217	11519	7127	7191	7960	10466	8841	7516	11440	9802	7067	8555	5776	8881	5763	9342	9043	8086	5123	8608	6366	10391	2212	6330	7856	6172	13382	2252	6256	9932
GCF_009556855.1	NC_072354	NC_072354.1	Talaromyces marneffei chromosome 7; complete sequence.	530310	527688	458652	454573	1971223	0.27	0.27	0.23	0.23	0.46	0.9615	0.0069	0.9931	1.9961	351	346	697	299597	277585	278545	273941	1129668	0.26	0.25	0.25	0.24	0.49	0.919	0.1421	0.8732	1.9907	351	345	696	268742	242758	254241	250950	1016691	0.26	0.24	0.25	0.25	0.49	0.8854	0.257	0.7908	1.9675	28994	33108	22542	21314	105958	0.28	0.31	0.21	0.2	0.41	0.8407	0.3546	0.7192	1.9296	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	1	1	14	24	22	24	84	0.17	0.29	0.26	0.29	0.55	0.8929	0.3066	0.75	1.9698	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	7310	7494	2807	4611	6493	7651	6294	6425	5123	6046	6031	8735	5902	4599	3988	6018	5562	4689	6249	5407	5095	5050	5970	8527	6387	5413	3624	6753	5063	6177	7141	5376	5559	3924	6038	6697	4281	4448	4576	6212	4930	4533	7003	5705	4032	5170	3556	5209	3461	5393	5312	4763	3057	4895	3729	5803	1358	3749	4358	3692	8084	1333	3744	5626
GCF_009556855.1	NC_072355	NC_072355.1	Talaromyces marneffei chromosome 8; complete sequence.	524493	521672	454312	453320	1953797	0.27	0.27	0.23	0.23	0.46	0.9612	0.0038	0.9962	1.9964	342	363	705	289208	272382	274731	266014	1102335	0.26	0.25	0.25	0.24	0.49	0.9183	0.1386	0.876	1.9911	341	361	702	255635	234541	247581	240840	978597	0.26	0.24	0.25	0.25	0.49	0.8847	0.2591	0.7893	1.9656	31059	35772	24581	22944	114356	0.27	0.31	0.21	0.2	0.41	0.842	0.3413	0.7284	1.9327	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1	2	3	43	67	43	62	215	0.2	0.31	0.2	0.29	0.49	0.8807	0.4024	0.6672	1.9633	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	7070	7281	2680	4716	6194	7007	6045	6005	5296	5723	5718	8132	6161	4477	3749	5528	5624	4692	5866	5180	5233	4713	5873	7840	6211	5188	3651	6731	4561	5767	6478	5311	5500	3714	5875	6191	4045	4144	4312	5864	4738	4161	6382	5555	3971	4924	3297	4874	3253	5372	5332	4598	2831	4779	3640	5978	1281	3837	4432	3585	7715	1284	3720	5621