GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_000226115.1	NC_016457	NC_016457.1	Thermothielavioides terrestris NRRL 8126 chromosome 1; complete sequence.	2318258	2311994	2734606	2736651	10101509	0.23	0.23	0.27	0.27	0.54	0.9575	0.0017	0.9983	1.995	1347	1342	2689	1006538	932207	1565073	1455144	4958962	0.2	0.19	0.31	0.29	0.61	0.907	0.1457	0.8701	1.9531	530	1260	1243	2503	696689	592259	1142273	1072131	3503352	0.21	0.18	0.31	0.3	0.61	0.8719	0.2703	0.7806	1.9247	109259	125115	148154	126952	509480	0.2	0.24	0.3	0.26	0.56	0.8548	0.3917	0.6985	1.9284	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	21	18	39	697	874	894	1075	3540	0.2	0.25	0.25	0.3	0.56	0.8894	0.2536	0.7823	1.9716	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	18488	28391	4556	8767	19882	38520	20242	6733	21459	19379	6083	15861	12892	24033	7632	20081	11703	20122	21830	7473	31908	12305	28912	15152	27530	25007	6041	10714	5057	16381	24295	11424	26329	3409	12228	35261	19243	26278	15209	45679	26419	35188	8055	42718	16488	9336	19821	12452	6470	12199	26647	37405	2226	16476	18362	19008	1658	29104	35388	12916	16652	1289	7247	19734
GCF_000226115.1	NC_016458	NC_016458.1	Thermothielavioides terrestris NRRL 8126 chromosome 2; complete sequence.	2126785	2129971	2613169	2607587	9477512	0.22	0.22	0.28	0.28	0.55	0.9579	0.0018	0.9982	1.9925	1303	1310	2613	998449	917951	1562253	1451611	4930264	0.2	0.19	0.31	0.29	0.61	0.9069	0.1459	0.8698	1.9522	364	1233	1208	2441	703537	590559	1143864	1075415	3513375	0.21	0.18	0.31	0.3	0.61	0.872	0.2717	0.7798	1.9244	95504	112623	139838	117391	465356	0.2	0.24	0.3	0.26	0.56	0.8554	0.3972	0.6947	1.926	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	17	23	40	670	885	878	1060	3493	0.19	0.25	0.25	0.3	0.56	0.8885	0.2564	0.7817	1.966	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	18547	29733	4407	8683	19767	40042	20649	6677	21655	18613	6180	16272	12959	24176	7385	20142	11710	20034	21956	7434	31420	12474	28804	15197	28713	25194	5840	11034	4964	16707	23976	11371	26027	3471	12015	36176	18990	26467	15335	46310	26213	34934	8303	42283	16554	9189	19646	12374	6298	11932	27114	37253	2222	16647	18749	18969	1648	28176	35937	12323	16570	1269	7521	19537
GCF_000226115.1	NC_016459	NC_016459.1	Thermothielavioides terrestris NRRL 8126 chromosome 3; complete sequence.	1134235	1135424	1255797	1261489	4786945	0.24	0.24	0.26	0.26	0.53	0.9557	0.0028	0.9972	1.9981	597	606	1203	458099	431015	701736	652543	2243393	0.2	0.19	0.31	0.29	0.61	0.9057	0.1474	0.869	1.9515	233	550	546	1096	305576	267172	507186	473424	1553358	0.21	0.18	0.31	0.3	0.61	0.8742	0.256	0.7904	1.9282	64119	71534	77403	69406	282462	0.21	0.24	0.3	0.26	0.55	0.8552	0.3874	0.7008	1.9303	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	11	12	23	393	500	529	609	2031	0.19	0.25	0.26	0.3	0.56	0.8869	0.2102	0.8159	1.9756	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8066	12061	2174	3997	8808	16310	9277	3108	9431	8898	2722	6862	5472	10608	3245	9035	5140	9174	9836	3479	14596	5689	12909	6701	12071	11136	2851	4792	2181	7426	10820	5267	11437	1614	5361	15818	8980	11323	7104	20327	10914	15805	3476	19140	7783	4317	8982	4885	3026	5805	11535	16555	1031	7261	7385	8304	672	12546	15417	5753	7375	591	3392	8814
GCF_000226115.1	NC_016460	NC_016460.1	Thermothielavioides terrestris NRRL 8126 chromosome 4; complete sequence.	1026564	1026686	1265073	1260599	4578922	0.22	0.22	0.28	0.28	0.55	0.9566	0.0018	0.9982	1.9923	626	599	1225	465930	431100	744956	689834	2331820	0.2	0.19	0.32	0.29	0.61	0.9054	0.1469	0.869	1.9499	145	585	542	1127	325178	274727	541218	505946	1647069	0.21	0.18	0.31	0.3	0.62	0.8725	0.2645	0.7845	1.9252	42178	51730	65280	55047	214235	0.2	0.24	0.3	0.26	0.56	0.8522	0.4	0.6925	1.9244	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8	12	20	319	453	430	537	1739	0.18	0.26	0.25	0.31	0.56	0.8876	0.2901	0.7572	1.9673	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8613	13969	2000	3990	9283	18966	9932	2972	10035	8656	2767	7254	5698	11363	3362	9343	5361	9380	10150	3427	15323	5843	13939	7216	13744	11620	2787	4775	2193	7744	11209	5219	12519	1572	5226	17179	9209	12447	7342	22454	12319	16841	3492	19826	7625	4157	9029	5403	2876	5694	12990	18100	1021	7724	8481	8711	706	13157	17112	5855	7814	548	3356	9212
GCF_000226115.1	NC_016461	NC_016461.1	Thermothielavioides terrestris NRRL 8126 chromosome 5; complete sequence.	973623	972527	1225350	1225381	4396881	0.22	0.22	0.28	0.28	0.56	0.9575	0.0006	0.9994	1.9905	618	600	1218	465155	431951	730643	679338	2307087	0.2	0.19	0.31	0.29	0.61	0.9075	0.1439	0.8715	1.953	144	584	559	1143	326163	277983	534634	501080	1639860	0.21	0.18	0.31	0.3	0.61	0.8738	0.2667	0.7831	1.927	44871	52026	64464	55475	216836	0.2	0.24	0.3	0.26	0.56	0.8563	0.3863	0.7017	1.9279	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	10	6	16	283	351	340	432	1406	0.2	0.25	0.24	0.31	0.55	0.8896	0.2628	0.7759	1.9718	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8542	13517	2103	4153	9403	17885	9444	3174	10301	9409	2875	7366	6217	11736	3583	9623	5482	9540	10470	3359	14969	5846	13676	7058	12502	11865	2654	5033	2409	7754	11468	5147	12166	1637	5738	16997	8739	12392	7226	21463	12256	16022	3695	19833	7940	4281	9159	5608	3079	5532	12991	17431	1023	7463	8532	8809	703	13119	16710	5803	7644	596	3470	9088
GCF_000226115.1	NC_016462	NC_016462.1	Thermothielavioides terrestris NRRL 8126 chromosome 6; complete sequence.	780382	781368	1005413	1003324	3570487	0.22	0.22	0.28	0.28	0.56	0.954	0.0017	0.9983	1.9887	514	492	1006	388537	356392	612183	566274	1923386	0.2	0.19	0.32	0.29	0.61	0.9069	0.1497	0.8666	1.9517	68	487	458	945	270258	225654	449345	418093	1363350	0.21	0.18	0.31	0.3	0.62	0.872	0.2724	0.7789	1.9226	40641	47618	56381	49301	193941	0.2	0.24	0.3	0.26	0.56	0.8553	0.4001	0.6928	1.9266	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5	9	14	236	306	324	362	1228	0.19	0.25	0.26	0.3	0.56	0.885	0.1899	0.8329	1.9788	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	7340	11422	1573	3404	7372	15901	7492	2568	8610	7453	2329	5982	4885	9423	2823	8117	4515	7711	8581	2647	12504	4697	11592	5608	11304	10302	2145	3988	1795	6036	9741	3934	10194	1327	4702	14046	7560	10342	5939	18705	10437	14516	2938	16717	6489	3292	7682	4586	2422	4308	10687	14570	843	6113	7261	7193	611	10913	14191	4727	6204	497	2789	7130