GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_N Number of 'N' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_N Number of 'N' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	fr_tRNA_N Frequency of 'N' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_000243375.1	NC_016501	NC_016501.1	Torulaspora delbrueckii CBS 1146 chromosome 1; complete genome.	411259	410152	299029	297231	350	1418021	0.29	0.29	0.21	0.21	0.42	0.9558	0.0044	0.9956	1.9816	425	392	817	347929	302493	229970	260867	44	1141303	0.3	0.26	0.2	0.23	0.43	0.9121	0.1958	0.829	1.9736	0	411	386	797	346324	300728	228934	259610	24	1135620	0.31	0.26	0.2	0.23	0.43	0.9093	0.2039	0.8242	1.9714	0	1300	1358	644	767	4069	0.33	0.34	0.15	0.18	0.33	0.861	0.318	0.7367	1.8431	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	14	6	20	278	377	372	470	5	1502	0.19	0.25	0.24	0.31	0.01	0.55	0.8758	0.3183	0.7365	1.9554	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8162	14030	3904	7634	6692	10804	8442	9114	4525	4234	10451	14887	6633	3152	5836	8349	7463	5756	7982	7967	5462	9616	3477	14802	6462	4607	5170	10944	5955	4601	7757	5223	5481	5220	5900	7581	2999	2646	6428	4916	3869	1196	12052	3465	1879	8036	2827	8060	2953	5144	4491	2827	5998	4932	3781	7191	252	1022	2248	3070	9479	387	339	1754
GCF_000243375.1	NC_016502	NC_016502.1	Torulaspora delbrueckii CBS 1146 chromosome 2; complete genome.	391240	394871	284705	283480	101	1354397	0.29	0.29	0.21	0.21	0.42	0.9557	0.0068	0.9933	1.9812	392	404	796	326727	283693	213440	244086	81	1068027	0.3	0.26	0.2	0.23	0.44	0.9112	0.1987	0.827	1.9729	77	366	391	757	324772	281460	211891	242347	81	1060551	0.31	0.26	0.2	0.23	0.43	0.9094	0.212	0.8198	1.9674	77	980	1150	574	600	3304	0.29	0.37	0.17	0.17	0.34	0.8579	0.2863	0.7616	1.8434	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	24	13	37	534	677	690	840	0	2741	0.2	0.25	0.25	0.31	0	0.55	0.8736	0.2924	0.7606	1.9588	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	7538	13114	3614	6839	6156	10161	7893	8546	4176	4020	10013	14336	5917	2873	5422	7972	6820	5249	7644	7355	5208	8919	3349	13841	5991	4049	5015	10614	5718	4188	7303	4977	5107	4724	5233	7170	2863	2268	5890	4506	3647	1205	11470	3177	1873	7360	2513	7722	2918	4880	4116	2616	5521	4606	3541	6419	225	925	2016	2740	9031	360	307	1692
GCF_000243375.1	NC_016503	NC_016503.1	Torulaspora delbrueckii CBS 1146 chromosome 3; complete genome.	375708	372307	271271	272501	262	1292049	0.29	0.29	0.21	0.21	0.42	0.956	0.0068	0.9932	1.9818	364	348	712	315387	274428	209587	234385	24	1033811	0.3	0.26	0.2	0.23	0.43	0.9123	0.1882	0.835	1.9746	4	354	341	695	314235	273135	208837	233468	24	1029699	0.3	0.27	0.2	0.23	0.43	0.9102	0.1987	0.8285	1.969	4	854	925	422	512	2713	0.33	0.34	0.15	0.18	0.33	0.8436	0.3048	0.7442	1.8313	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	10	7	17	265	329	303	384	0	1281	0.21	0.26	0.23	0.3	0	0.53	0.8665	0.3017	0.7534	1.9636	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	7260	12546	3401	6963	6069	9623	8057	8270	4282	3499	9884	13647	6110	2914	5126	7843	7029	5008	7306	7011	5085	8704	3227	13446	5888	4083	4740	10208	5398	4055	7273	4797	4948	4533	5217	7040	2773	2334	5790	4585	3494	1092	10912	3158	1634	7326	2489	7214	2618	4383	4076	2586	5418	4408	3296	6346	204	913	1917	2650	8881	360	300	1559
GCF_000243375.1	NC_016504	NC_016504.1	Torulaspora delbrueckii CBS 1146 chromosome 4; complete genome.	354250	352618	256014	255030	158	1218070	0.29	0.29	0.21	0.21	0.42	0.9557	0.0042	0.9958	1.9812	349	343	692	294925	259933	194762	221375	24	971019	0.3	0.26	0.2	0.23	0.44	0.9118	0.1889	0.8344	1.9748	0	329	330	659	293765	258614	193797	220220	24	966420	0.3	0.26	0.2	0.23	0.43	0.9113	0.1962	0.8306	1.9716	0	642	646	326	365	1979	0.32	0.33	0.17	0.18	0.35	0.8596	0.2689	0.777	1.9093	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	20	13	33	477	629	606	766	0	2478	0.19	0.25	0.24	0.31	0	0.55	0.8767	0.2764	0.7673	1.9672	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	6913	12120	3246	6364	5627	9339	7446	7820	3909	3586	8773	13006	5673	2608	4885	7190	6386	4853	6961	6902	4696	8045	3116	12793	5145	3730	4567	9639	5223	3721	6749	4488	4737	4305	4817	6594	2647	2074	5441	4211	3246	1027	10198	2872	1688	6808	2275	6813	2616	4379	3829	2260	5151	4193	3100	6027	237	842	1768	2561	7652	339	392	1496
GCF_000243375.1	NC_016505	NC_016505.1	Torulaspora delbrueckii CBS 1146 chromosome 5; complete genome.	315119	316966	228050	226477	370	1086982	0.29	0.29	0.21	0.21	0.42	0.9556	0.0064	0.9936	1.9805	298	292	590	261453	231175	172046	195553	19	860246	0.3	0.27	0.2	0.23	0.43	0.9122	0.191	0.8329	1.9738	0	285	282	567	259036	228884	170434	193684	19	852057	0.3	0.27	0.2	0.23	0.43	0.9105	0.2077	0.8241	1.9676	0	1161	1172	610	739	3682	0.34	0.31	0.15	0.2	0.35	0.8642	0.3519	0.7137	1.8379	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	13	9	22	330	433	398	501	0	1662	0.2	0.26	0.24	0.3	0	0.54	0.8646	0.3304	0.735	1.9551	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	6078	10538	2853	5694	4976	8095	6462	6943	3473	3124	7941	11311	4712	2226	4309	6300	5597	4298	6359	6179	4159	7375	2703	11103	4515	3305	4018	8528	4445	3287	6064	3950	4168	3620	4253	5785	2331	1845	4934	3599	2859	926	9134	2591	1511	6155	1809	6163	2409	3771	3290	2031	4601	3603	2819	5243	206	751	1489	2286	6976	312	292	1310
GCF_000243375.1	NC_016506	NC_016506.1	Torulaspora delbrueckii CBS 1146 chromosome 6; complete genome.	309739	309286	226706	224590	302	1070623	0.29	0.29	0.21	0.21	0.42	0.956	0.0054	0.9946	1.9821	300	286	586	261839	228002	174044	196247	12	860144	0.3	0.26	0.2	0.24	0.44	0.9115	0.1942	0.8305	1.9748	0	286	270	556	260368	226368	172975	194947	12	854670	0.31	0.26	0.2	0.23	0.43	0.9108	0.2005	0.8264	1.9697	0	933	984	450	559	2926	0.32	0.34	0.15	0.2	0.35	0.8604	0.289	0.7644	1.9035	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	14	16	30	435	573	542	678	0	2228	0.19	0.26	0.24	0.31	0	0.55	0.8602	0.3304	0.7368	1.95	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5949	10273	2818	5641	5014	8161	6294	6713	3477	3004	8302	11037	4978	2484	4439	6518	5692	4354	6110	6048	4292	7028	2714	11092	4948	3440	3901	8335	4529	3595	5773	3882	4049	3971	4469	5764	2295	2030	4597	3586	3131	923	8917	2729	1512	5948	2077	6015	2196	3793	3554	2156	4619	3733	2871	5235	177	778	1668	2166	7106	283	279	1409
GCF_000243375.1	NC_016507	NC_016507.1	Torulaspora delbrueckii CBS 1146 chromosome 7; complete genome.	275379	274232	197873	199015	64	946563	0.29	0.29	0.21	0.21	0.42	0.9521	0.005	0.995	1.9811	270	240	510	219050	196035	147146	164865	24	727120	0.3	0.27	0.2	0.23	0.44	0.9125	0.1806	0.8411	1.9758	0	255	236	491	217994	194913	146334	164005	24	723270	0.3	0.27	0.2	0.23	0.43	0.9103	0.1914	0.8346	1.9729	0	505	511	269	299	1584	0.32	0.32	0.18	0.19	0.36	0.8565	0.3443	0.7305	1.906	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	14	4	18	266	341	333	387	0	1327	0.2	0.26	0.25	0.29	0	0.54	0.874	0.278	0.7768	1.9586	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5145	8476	2513	5073	4281	6656	5488	6052	2854	2799	6676	9136	4130	2098	3558	5268	4760	3739	5396	5368	3423	6133	2209	9106	3921	2899	3325	7059	3899	2981	4953	3507	3480	3285	3849	4689	1955	1664	4092	3198	2464	697	7345	2245	1300	5179	1743	5072	2037	3301	2807	1792	3989	3114	2374	4611	168	678	1422	1842	6093	294	241	1167
GCF_000243375.1	NC_016508	NC_016508.1	Torulaspora delbrueckii CBS 1146 chromosome 8; complete genome.	240912	241073	177361	174057	570	833973	0.29	0.29	0.21	0.21	0.42	0.9526	0.0097	0.9904	1.9818	221	250	471	196002	171732	130610	148673	0	647017	0.3	0.26	0.2	0.24	0.44	0.9112	0.1959	0.829	1.9748	0	212	232	444	190823	166527	126831	143590	0	627771	0.3	0.26	0.2	0.23	0.43	0.9082	0.2098	0.821	1.9697	0	598	531	284	325	1738	0.37	0.3	0.16	0.17	0.33	0.8498	0.345	0.7061	1.8137	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	7	9	16	230	299	294	363	0	1186	0.2	0.25	0.25	0.3	0	0.55	0.8868	0.2524	0.7832	1.972	2	9	11	4344	4367	3195	4389	16295	0.26	0.27	0.21	0.26	0	0.47	0.9165	0.1249	0.8881	1.991	4432	7731	2178	4252	3699	6122	4811	4980	2526	2254	5732	8286	3502	1718	3102	4666	4174	3216	4497	4333	3023	5374	1945	8066	3538	2529	2922	6318	3197	2408	4613	2824	3128	2837	3120	4212	1660	1394	3536	2912	2095	603	6645	1829	1012	4483	1519	4478	1671	2726	2491	1541	3319	2720	2049	3912	131	586	1263	1657	5299	226	187	1037