GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	fr_gene_N Frequency of 'N' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	fr_cds_N Frequency of 'N' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	fr_tRNA_N Frequency of 'N' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_013402915.1	NC_050719	NC_050719.1	Zygotorulaspora mrakii chromosome 1; complete sequence.	547680	544127	361036	361035	1813878	0.3	0.3	0.2	0.2	0.4	0.9526	0.0033	0.9968	1.9698	493	434	927	429453	366891	252289	286395	1335028	0.32	0.27	0.19	0.22	0	0.41	0.91	0.2029	0.8232	1.9614	476	426	902	426456	362497	248992	284524	1322469	0.32	0.27	0.19	0.22	0	0.41	0.9081	0.2103	0.8188	1.9568	1761	1892	918	1265	5836	0.33	0.32	0.15	0.2	0	0.35	0.8619	0.3187	0.7328	1.8434	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	16	8	24	344	453	444	540	1781	0.19	0.26	0.25	0.3	0	0.55	0.883	0.3203	0.7378	1.9604	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	9468	12517	5317	7473	9045	10705	8709	12729	4883	4620	15982	18810	9548	3855	6759	8550	8964	5168	8338	11191	5920	9835	3387	17861	6462	4390	5464	11605	8677	5894	7004	6523	5021	8099	8312	7833	3202	2692	5929	4449	4590	1250	18788	4539	2387	10082	2812	9732	3402	6294	4762	3534	9650	5341	3911	7872	252	963	2713	2677	11373	433	385	1868
GCF_013402915.1	NC_050720	NC_050720.1	Zygotorulaspora mrakii chromosome 2; complete sequence.	426308	422847	279723	282331	1411209	0.3	0.3	0.2	0.2	0.4	0.9533	0.0087	0.9913	1.9699	365	357	722	332614	283245	194547	223832	1034238	0.31	0.27	0.19	0.23	0	0.42	0.9096	0.2054	0.8209	1.9623	348	341	689	330080	280429	192701	221575	1024785	0.32	0.27	0.19	0.22	0	0.41	0.9067	0.2178	0.8132	1.9562	1789	1952	1072	1311	6124	0.4	0.29	0.14	0.17	0	0.31	0.8625	0.3813	0.6597	1.6551	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	17	15	32	449	599	597	744	2389	0.19	0.26	0.24	0.31	0	0.55	0.8659	0.365	0.7084	1.9465	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	7192	9863	3963	5892	6732	8182	6488	9883	3883	3726	12042	14710	7137	3059	5296	6796	6784	3940	6511	8475	4635	7946	2569	13963	5026	3629	4205	9115	6605	4624	5729	4795	4021	6185	6261	6044	2475	1994	4669	3403	3685	1109	14291	3537	1897	7810	2164	7754	2807	5097	3683	2628	7598	3947	3007	6094	209	711	2083	2156	8738	366	345	1419
GCF_013402915.1	NC_050721	NC_050721.1	Zygotorulaspora mrakii chromosome 3; complete sequence.	395023	397133	264863	261096	1318115	0.3	0.3	0.2	0.2	0.4	0.9531	0.0098	0.9902	1.9704	326	342	668	305001	263132	179688	207629	955450	0.31	0.27	0.19	0.23	0	0.42	0.911	0.2042	0.8225	1.9627	315	327	642	303545	261526	178572	206301	949944	0.32	0.27	0.19	0.22	0	0.41	0.9091	0.2186	0.8142	1.9572	980	1053	602	684	3319	0.28	0.36	0.17	0.19	0	0.36	0.871	0.3266	0.7256	1.8475	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	11	15	26	384	497	480	598	1959	0.2	0.25	0.24	0.31	0	0.55	0.875	0.2771	0.7741	1.9605	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	6760	8877	3736	5337	6356	7807	6120	8995	3664	3442	11383	13186	6639	2709	4836	6190	6327	3670	6096	8205	4336	7114	2516	12875	4637	3155	3934	8546	6378	4412	5281	4630	3705	5708	5794	5603	2208	1862	4469	3183	3442	972	13118	3352	1920	7159	2091	7065	2705	4652	3285	2456	6617	3673	3061	5621	223	746	1922	1990	7781	354	379	1369
GCF_013402915.1	NC_050722	NC_050722.1	Zygotorulaspora mrakii chromosome 4; complete sequence.	392598	388414	265303	266655	1312970	0.3	0.3	0.2	0.2	0.41	0.954	0.0079	0.9921	1.9739	333	327	660	303599	256895	182879	208392	951765	0.31	0.27	0.19	0.23	0	0.42	0.911	0.1993	0.8263	1.964	313	308	621	293741	247085	175430	198615	914871	0.32	0.27	0.19	0.22	0	0.41	0.9059	0.2207	0.8138	1.9561	2469	2380	1483	1620	7952	0.31	0.32	0.18	0.19	0	0.36	0.8675	0.2381	0.7961	1.9196	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5	14	19	278	349	349	427	1403	0.2	0.25	0.25	0.3	0	0.55	0.8946	0.2284	0.802	1.9762	15	5	20	7111	7081	5617	7730	27539	0.26	0.26	0.22	0.26	0	0.49	0.9207	0.1166	0.8956	1.9925	6332	8791	3738	5205	6120	7534	5812	8363	3524	3040	10620	12618	6590	2850	4715	6170	6062	3795	5718	7651	4259	6605	2369	12067	4808	3326	3695	7775	5897	4142	5001	4312	3587	5748	6151	5664	2247	1895	4162	3080	3426	981	12403	3387	1684	6773	1996	6691	2383	4441	3397	2477	6399	3605	2885	5430	217	758	1983	1880	7635	339	337	1397
GCF_013402915.1	NC_050723	NC_050723.1	Zygotorulaspora mrakii chromosome 5; complete sequence.	379234	375300	253783	252163	1260480	0.3	0.3	0.2	0.2	0.4	0.9535	0.0084	0.9916	1.9717	314	281	595	300469	257764	179510	203296	941039	0.31	0.27	0.19	0.22	0	0.42	0.912	0.1986	0.8267	1.9632	303	274	577	299039	256225	178594	202139	935997	0.32	0.27	0.19	0.22	0	0.41	0.9091	0.2071	0.8222	1.9598	1129	1155	563	727	3574	0.36	0.32	0.15	0.17	0	0.32	0.8608	0.4156	0.6519	1.7436	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	11	7	18	256	346	332	410	1344	0.19	0.26	0.25	0.31	0	0.55	0.8634	0.3545	0.7233	1.9441	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	6571	8621	3694	5473	6413	7552	6401	8758	3669	3295	11173	13115	6790	2747	4726	6138	6657	3646	5792	7965	4127	7222	2431	12644	4772	3394	3770	8154	5894	4154	5034	4426	3567	5562	6214	5598	2300	1838	4259	3246	3337	939	12655	3236	1663	7284	2021	6813	2390	4385	3499	2445	6738	3758	2756	5443	211	669	1928	2006	8070	292	275	1374
GCF_013402915.1	NC_050724	NC_050724.1	Zygotorulaspora mrakii chromosome 6; complete sequence.	376473	372552	248388	252699	1250112	0.3	0.3	0.2	0.2	0.4	0.953	0.0138	0.9863	1.9714	322	322	644	295613	248195	174862	197280	915950	0.32	0.27	0.19	0.22	0	0.42	0.9105	0.2038	0.8228	1.962	306	313	619	293545	246101	173493	195624	908763	0.32	0.27	0.19	0.22	0	0.41	0.9071	0.2182	0.8144	1.9569	1678	1591	880	1056	5205	0.36	0.31	0.16	0.18	0	0.33	0.8696	0.3274	0.7205	1.7867	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	16	9	25	344	479	459	564	1846	0.19	0.26	0.25	0.3	0	0.55	0.8747	0.3207	0.7338	1.9593	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	6306	8895	3672	5221	6221	7375	5478	8328	3463	3179	11034	12547	6594	2884	4894	6074	6183	3662	5540	7582	4253	6478	2391	11837	4765	3321	3704	7789	5943	4114	4955	4402	3374	5683	5973	5443	2288	1873	4186	3003	3459	945	12562	3149	1705	6707	1940	6555	2266	4298	3554	2353	6435	3659	2839	5284	195	703	1916	1779	7732	319	292	1351
GCF_013402915.1	NC_050725	NC_050725.1	Zygotorulaspora mrakii chromosome 7; complete sequence.	348357	347637	232448	231934	1160376	0.3	0.3	0.2	0.2	0.4	0.9535	0.0021	0.9979	1.9711	296	284	580	275519	236599	163265	186855	862238	0.31	0.27	0.19	0.22	0	0.42	0.9108	0.2019	0.8239	1.9631	284	277	561	274415	235311	162415	185883	858024	0.32	0.27	0.19	0.22	0	0.41	0.9101	0.2188	0.8149	1.9564	792	912	483	523	2710	0.29	0.36	0.18	0.17	0	0.35	0.8613	0.3154	0.7414	1.9006	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	12	7	19	269	347	349	426	1391	0.19	0.25	0.25	0.31	0	0.56	0.8705	0.2976	0.7633	1.9522	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	6121	7794	3299	4940	5737	7161	5576	8224	3317	3101	10359	12226	6021	2421	4398	5595	5878	3426	5322	7322	3929	6472	2201	11452	4410	2908	3506	7441	5567	3948	4716	4174	3231	5368	5333	5108	2094	1732	3851	3000	3057	917	11545	3030	1541	6546	1818	6305	2330	3961	3099	2149	6198	3510	2598	5055	206	703	1712	1846	7388	264	273	1268
GCF_013402915.1	NC_050726	NC_050726.1	Zygotorulaspora mrakii chromosome 8; complete sequence.	265810	263975	177409	178182	885376	0.3	0.3	0.2	0.2	0.4	0.9508	0.0056	0.9944	1.9719	222	221	443	215496	181924	125268	145163	667851	0.32	0.27	0.19	0.23	0	0.42	0.9096	0.2099	0.8176	1.9616	213	212	425	213410	179778	123653	143000	659841	0.32	0.27	0.19	0.22	0	0.41	0.9085	0.2139	0.8154	1.9593	462	466	238	291	1457	0.31	0.33	0.17	0.2	0	0.36	0.8702	0.2415	0.8006	1.915	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8	6	14	195	258	251	322	1026	0.19	0.25	0.24	0.31	0	0.56	0.8762	0.2797	0.7649	1.9658	1	3	4	1423	1416	1123	1546	5508	0.26	0.26	0.22	0.27	0	0.49	0.9207	0.1166	0.8956	1.9925	4704	6478	2602	3649	4357	5500	4124	6277	2555	2340	8168	9299	4767	2004	3607	4288	4433	2701	3975	5589	3146	4675	1733	8786	3300	2093	2706	5983	4086	2876	3603	3235	2544	4102	4154	4160	1548	1288	2930	2228	2600	688	9454	2274	1204	4923	1344	4885	1690	3165	2476	1729	4578	2468	2048	3770	143	481	1332	1310	5408	238	202	935
GCF_013402915.1	NW_023500906	NW_023500906.1	Zygotorulaspora mrakii strain NRRL Y-6702 mitochondrion; complete genome.	15456	15104	3176	3908	37644	0.41	0.4	0.08	0.1	0.19	0.881	0.1148	0.895	1.6961	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0