GBRAP

Genome-Based Retrieval and Analysis Parser


Fish : Hypanus_sabinus
Assembly Assembly Locus_ID Locus_ID Version Version Definition Sequence description bp_chromo_A Total number of 'A' nucleotides in the whole sequence bp_chromo_T Total number of 'T' nucleotides in the whole sequence bp_chromo_C Total number of 'C' nucleotides in the whole sequence bp_chromo_G Total number of 'G' nucleotides in the whole sequence bp_chromo_N Total number of 'N' nucleotides in the whole sequence bp_chromo_tot Total number of nucleotides in the whole sequence fr_chromo_A Frequency of 'A' nucleotides in the whole sequence fr_chromo_T Frequency of 'T' nucleotides in the whole sequence fr_chromo_C Frequency of 'C' nucleotides in the whole sequence fr_chromo_G Frequency of 'G' nucleotides in the whole sequence fr_chromo_N Frequency of 'N' nucleotides in the whole sequence GC_chromo Percentage of ā€˜G’ + ā€˜C’ nucleotides in the whole sequence topo_entropy_chromo Topological entropy of the whole sequence chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee shannon_chromo Shannon entropy of the whole sequence n_gene_pos Number of genes in the positive strand n_gene_neg Number of genes in the negative strand n_gene_tot Total number of genes in the chromosome bp_gene_A Number of 'A' bases in total genes bp_gene_T Number of 'T' bases in total genes bp_gene_C Number of 'C' bases in total genes bp_gene_G Number of 'G' bases in total genes bp_gene_N Number of 'N' bases in total genes bp_gene_tot Total number of bases in total genes fr_gene_A Frequency of 'A' bases among total gene bases fr_gene_T Frequency of 'T' bases among total gene bases fr_gene_C Frequency of 'C' bases among total gene bases fr_gene_G Frequency of 'G' bases among total gene bases fr_gene_N Frequency of 'N' bases among total gene bases GC_gene Percentage of 'G' and 'C' bases in total genes topo_entropy_gene Topological entropy calculated from total gene sequences chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes shannon_gene Shannon entropy score for total genes bp_gene_overlap_tot Number of bases overlapping between genes on two strands n_cds_pos Number of CDS in the positive strand n_cds_neg Number of CDS in the negative strand n_cds_tot Total number of CDS in the chromosome bp_cds_A Number of 'A' bases in total CDS (coding sequences) bp_cds_T Number of 'T' bases in total CDS bp_cds_C Number of 'C' bases in total CDS bp_cds_G Number of 'G' bases in total CDS bp_cds_N Number of 'N' bases in total CDS bp_cds_tot Total bases in total CDS fr_cds_A Frequency of 'A' bases among total CDS bases fr_cds_T Frequency of 'T' bases among total CDS bases fr_cds_C Frequency of 'C' bases among total CDS bases fr_cds_G Frequency of 'G' bases among total CDS bases fr_cds_N Frequency of 'N' bases among total CDS bases GC_cds Percentage of 'G' and 'C' bases in total CDS topo_entropy_cds Topological entropy calculated from total CDS sequences chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS shannon_cds Shannon entropy score for total CDS bp_cds_overlap_tot Number of bases overlapping between CDS on two strands bp_cds_intron_A Number of 'A' bases in total introns between CDS bp_cds_intron_T Number of 'T' bases in total introns between CDS bp_cds_intron_C Number of 'C' bases in total introns between CDS bp_cds_intron_G Number of 'G' bases in total introns between CDS bp_cds_intron_N Number of 'N' bases in total introns between CDS bp_cds_intron_tot Total bases in total introns between CDS fr_cds_intron_A Frequency of 'A' bases in total introns between CDS fr_cds_intron_T Frequency of 'T' bases in total introns between CDS fr_cds_intron_C Frequency of 'C' bases in total introns between CDS fr_cds_intron_G Frequency of 'G' bases in total introns between CDS fr_cds_intron_N Frequency of 'N' bases in total introns between CDS GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS shannon_cds_intron Shannon entropy score for total introns between CDS bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands n_ncRNA_pos Number of ncRNA in the positive strand n_ncRNA_neg Number of ncRNA in the negative strand n_ncRNA_tot Total number of ncRNA in the chromosome bp_ncRNA_A Number of 'A' bases in total ncRNA bp_ncRNA_T bp_ncRNA_T bp_ncRNA_C Number of 'C' bases in total ncRNA bp_ncRNA_G Number of 'G' bases in total ncRNA bp_ncRNA_N Number of 'N' bases in total ncRNA bp_ncRNA_tot Total bases in total ncRNA fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA shannon_ncRNA Shannon entropy score for total ncRNA bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands bp_nc_intron_A Number of 'A' bases in total introns between ncRNA bp_nc_intron_T Number of 'T' bases in total introns between ncRNA bp_nc_intron_C Number of 'C' bases in total introns between ncRNA bp_nc_intron_G Number of 'G' bases in total introns between ncRNA bp_nc_intron_N Number of 'N' bases in total introns between ncRNA bp_nc_intron_tot Total bases in total introns between ncRNA fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA shannon_nc_intron Shannon entropy score for total introns between ncRNA bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands n_tRNA_pos Number of tRNA in the positive strand n_tRNA_neg Number of tRNA in the negative strand n_tRNA_tot Total number of tRNA in the chromosome bp_tRNA_A Number of 'A' bases in total tRNA bp_tRNA_T Number of 'T' bases in total tRNA bp_tRNA_C Number of 'C' bases in total tRNA bp_tRNA_G Number of 'G' bases in total tRNA bp_tRNA_N Number of 'N' bases in total tRNA bp_tRNA_tot Total bases in total tRNA fr_tRNA_A Frequency of 'A' bases among total tRNA bases fr_tRNA_T Frequency of 'T' bases among total tRNA bases fr_tRNA_C Frequency of 'C' bases among total tRNA bases fr_tRNA_G Frequency of 'G' bases among total tRNA bases fr_tRNA_N Frequency of 'N' bases among total tRNA bases GC_tRNA Percentage of 'G' and 'C' bases in total tRNA topo_entropy_tRNA Topological entropy calculated from total tRNA sequences chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA shannon_tRNA Shannon entropy score for total tRNA bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands n_rRNA_pos Number of rRNA in the positive strand n_rRNA_neg Number of rRNA in the negative strand n_rRNA_tot Total number of rRNA in the chromosome bp_rRNA_A Number of 'A' bases in total rRNA bp_rRNA_T Number of 'T' bases in total rRNA bp_rRNA_C Number of 'C' bases in total rRNA bp_rRNA_G Number of 'G' bases in total rRNA bp_rRNA_N Number of 'N' bases in total rRNA bp_rRNA_tot Total bases in total rRNA fr_rRNA_A Frequency of 'A' bases among total rRNA bases fr_rRNA_T Frequency of 'T' bases among total rRNA bases fr_rRNA_C Frequency of 'C' bases among total rRNA bases fr_rRNA_G Frequency of 'G' bases among total rRNA bases fr_rRNA_N Frequency of 'N' bases among total rRNA bases GC_rRNA Percentage of 'G' and 'C' bases in total rRNA topo_entropy_rRNA Topological entropy calculated from total rRNA sequences chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA shannon_rRNA Shannon entropy score for total rRNA bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands ATG ATG AAG AAG GTA GTA ACT ACT GCA GCA GAG GAG GCT GCT ATT ATT TCC TCC TGG TGG AAT AAT GAA GAA TCA TCA ACG ACG AGT AGT AAC AAC TCT TCT GTG GTG TTC TTC TTT TTT CTG CTG GGT GGT CTC CTC GAT GAT CAG CAG ACC ACC CTA CTA TTG TTG TAT TAT GGA GGA ATC ATC CTT CTT GTC GTC ATA ATA ACA ACA GAC GAC CAC CAC CCC CCC TAC TAC GCC GCC AGC AGC CGC CGC AAA AAA GGC GGC TGC TGC GTT GTT GGG GGG AGA AGA TGT TGT CAT CAT TCG TCG GCG GCG TTA TTA CCT CCT AGG AGG CCA CCA TAG TAG CGG CGG CCG CCG CGT CGT CAA CAA TAA TAA TGA TGA CGA CGA
GCF_030144855.1NC_082706NC_082706.1Hypanus sabinus isolate sHypSab1 chromosome 1; sHypSab1.hap1; whole genome shotgun sequence.61322522614950014638429845596630182002148166510.290.290.220.2100.430.94270.010.99011.9856736661339281720822930637920649202212691945200994020570.280.290.210.2200.440.92810.09280.91581.97841719395075391046521164433087427046460138018414350.290.240.220.2500.470.86840.30810.75251.94928213784532239612215591489160397383800754096020.280.310.20.2100.410.90810.18260.84511.9554010710921615468315137411173611649805342910.290.260.210.2400.450.87970.27520.77471.95630162801816370241189638119845960056537390.290.30.20.2100.410.91130.16110.86021.96120521163981110610421477046060.210.250.220.3200.550.86990.29870.75311.96920000000000NANANANANANANANANANA0147641692356899744120121536710097103469628115191104316551117554778906210842940912731111539820168906829918611676177249557546111266650612849103278801739566621288599399647763675279179107123849161777727971085257774130009067868544694379651196111032012007249852714846330712885428092114822
GCF_030144855.1NC_082707NC_082707.1Hypanus sabinus isolate sHypSab1 chromosome 2; sHypSab1.hap1; whole genome shotgun sequence.61431909612112734458776845052689140002122976390.290.290.210.2100.420.94570.0070.9931.982472369114143042111731665269218863052249273040001064694210.290.290.210.2100.420.93020.08550.92151.9746434625895531142624184526726475465519874021462490.30.250.210.2400.450.86930.3110.74991.94760238281222499972817181891176177973600836311380.290.320.190.200.40.90640.17050.85241.9491012812825617904917494812670512686606075680.30.270.210.2300.440.87450.27060.77841.95060168405416840271183689120071020057526800.290.30.20.200.40.91190.14680.87221.95920461013417819224507490.180.240.250.3300.580.89310.2680.76811.95890000000000NANANANANANANANANANA017170191977076113481456917211120581411799051334014780213731337650791063312951114211480712471136401886377901032114584203509741687114290866614075119701113985988852156061129010134726989009875114633859207678284108571058576961471710761105114979447586171051910671136523315536745873964162235181102795044
GCF_030144855.1NC_082708NC_082708.1Hypanus sabinus isolate sHypSab1 chromosome 3; sHypSab1.hap1; whole genome shotgun sequence.56554009565135754100016841295575108001953741270.290.290.210.2100.420.94460.00390.99611.98261760912262977256430889871215668282183917342001040726360.280.290.210.2200.430.93010.08650.9211.9753111532494480974532925444341404821443951018260380.30.250.210.2400.450.8690.3020.75561.94780227848322376105916541583166876814200797793550.290.310.20.200.40.90830.16580.8571.949909599194117421112763858268700304030130.30.260.210.2300.440.87410.29160.76521.949256211353531145186815184831225039269480.290.310.20.200.40.90820.16030.86321.9549017926319450479620018680.170.240.260.3300.590.88610.3040.74241.954600151563505750775992760291350.220.220.260.300.560.90760.13560.87391.98080154431693360179479117001480510140114138489116261210717922111804141891411029954012161111641104616899642189511256817272868158481233772711188310107945371417554129859998868765917542867410226326718206743787688701660612914881888813863372173478321918211287284843824133317913458471892264134
GCF_030144855.1NC_082709NC_082709.1Hypanus sabinus isolate sHypSab1 chromosome 4; sHypSab1.hap1; whole genome shotgun sequence.55555097556905494057634340683348134001925187370.290.290.210.2100.420.94540.00250.99751.982463370313363207642133254046231803472345820342001119732170.290.30.210.2100.420.92920.0880.92031.9732760165275671094627339512699456623505337021019980.30.250.210.2400.450.86870.31230.74971.94590243067532539282517652404176887533600850443350.290.320.190.200.390.9060.16990.85291.9477010712222916431415979611596312165905617320.290.270.210.2300.440.87670.28020.77331.95050186899318673731346229139325920064760540.290.30.20.2100.410.90840.17330.8541.95670581317421624431009440.180.230.260.3300.590.88190.23970.79111.96180000000000NANANANANANANANANANA0184992080368731060313793161951100513469956613208142002056313842471910496126881079413918121481228319336777097681331119882936270451480884501436111694108917753917715195104529977699185908941115173447218537832984597427312154779855105204162384593541002411090137673768454842883533161056269112174596
GCF_030144855.1NC_082710NC_082710.1Hypanus sabinus isolate sHypSab1 chromosome 5; sHypSab1.hap1; whole genome shotgun sequence.54046467536415113942060740068341146001871915260.290.290.210.2100.420.94510.01190.98821.98355506091159226917442358153516760641171973245800802370440.280.280.220.2200.440.92620.10130.90951.976828050408468876438754363041347366383226015323870.290.240.220.2500.460.86870.31620.74681.94550173704601815399912761135130783333600613675270.280.310.20.2100.410.90680.18070.84591.953201251292541388371344709882210563904777680.290.260.220.2400.450.87630.27210.77661.9541481696673171457512493061231718100058932720.290.30.20.200.410.9080.16620.85841.958109615191261299355011060.170.240.270.3200.590.88050.24110.78781.96250000000000NANANANANANANANANANA012765147954326763496811320882849029789899549380143611055839967483860880531034389178450146475298729295481478374194527977052751064593297072642356711086780187481590057627532819229491435261797701709862091110474767068387233665834714684619785239248334516272210458379282983823
GCF_030144855.1NC_082711NC_082711.1Hypanus sabinus isolate sHypSab1 chromosome 6; sHypSab1.hap1; whole genome shotgun sequence.52525056522889903908391339111541144001830239000.290.290.210.2100.430.9430.00260.99741.98465945771171274702552860684920020738204707684800965734100.280.290.210.2200.430.92810.0950.91381.975821327446440886480144395975373228409291016586380.290.240.220.2500.460.86910.30850.75161.94870220884902309964716042305163580634000775925050.280.310.20.2100.410.90590.17750.8491.95068318124111235131569128789954239947104552520.290.260.210.2300.440.87780.27180.77751.953401510977153368210805621093322052185430.290.30.20.2100.410.9080.16670.85741.95790201737542656708858027640.20.240.260.3100.570.89980.21340.81241.97440000000000NANANANANANANANANANA01351815590524585591094714493920010273801610120105181607310598395080839858838811461100059496155766285810010867162508016509910426604111295955582536595636111783886980556013664480679181306615904690281487975627211581779081393624360260898074868910805250141333701315112154400082703907
GCF_030144855.1NC_082712NC_082712.1Hypanus sabinus isolate sHypSab1 chromosome 7; sHypSab1.hap1; whole genome shotgun sequence.51904710519002613942844339155537186001824075510.280.280.220.2100.430.94480.00350.99651.98615816051186274387802853526520574715210838206800976393800.280.290.220.2200.440.92550.10540.90741.975528320458490948491214398432411331429927017309040.290.240.220.2500.470.86910.30970.75111.95060204172122137213815294885155465055000726357400.280.30.210.2100.420.90620.18140.84641.9553172021139821114564214437910618310857605047800.290.260.210.2300.450.87640.29530.76331.94820141941713922771051945109852040049625590.280.30.210.2100.420.90620.19030.84271.956307916217275308389011890.180.230.260.3300.590.88750.24670.78261.96270000000000NANANANANANANANANANA0136651563452138643114551514395749484943510860998215356107214406851610199836511891985085751716459199297106431757396895341103395950114169964838870826264134349657951872937150881110720387614486734286627332700012038786082524036373658638477926812483246850214562317212351400187844446
GCF_030144855.1NC_082713NC_082713.1Hypanus sabinus isolate sHypSab1 chromosome 8; sHypSab1.hap1; whole genome shotgun sequence.49991388504467693693088337164236100001745432760.290.290.210.2100.420.94470.00770.99231.98355015171018230130872392475116715134168497421800805045140.290.290.210.2100.420.92970.08590.92191.974245349418396814430033355451324402349694014595800.30.250.210.2400.450.86930.31360.74791.94890170658671785436212335792124405031400596979240.290.310.20.200.40.90930.16290.85811.9536081108189121370117541851928964504137480.290.260.210.2300.450.87630.27510.77751.9506013190241387373977124101094720046946680.290.30.20.2100.410.90750.17050.85661.9562045912316317522206830.190.230.260.3300.580.87580.31130.73691.95840000000000NANANANANANANANANANA012149137284728775496401137080989210678589849775146729204323373058871780192928619882713098493673059699138416731470995995932978484957751579159411069976397378501860786578827824721459356817218702651081051970197092311827325763711470979303221733253055245011019386976823329
GCF_030144855.1NC_082714NC_082714.1Hypanus sabinus isolate sHypSab1 chromosome 9; sHypSab1.hap1; whole genome shotgun sequence.48171478486470313644710636379717152001696605320.280.290.210.2100.430.9440.00580.99421.98556536431296237570392463149217916980180800554600843901660.270.290.210.2200.440.92510.10210.90881.9763142845055271032495964410685419180450088017759170.290.240.230.2500.480.86980.30730.75251.95010179817811880776913542618137001053200640354730.280.310.20.2100.420.90460.19280.83781.952308588173114943113622851978600103997630.290.260.220.2300.450.87760.27550.77471.953090677592714766194569671820031927850.290.30.210.2100.410.90720.18560.84411.956205919781243134314321717057350.210.240.250.300.550.86830.18360.84231.97490000000000NANANANANANANANANANA013741158355213873111611153891025798029152117071020816014105684752838510717889311906103649224173776470943311154174859120523910438610912381100648693736659481202810048919778307301964610805405815358846591777888754512334795880244463448759949020960811843241554485049336011902399393014543
GCF_030144855.1NC_082715NC_082715.1Hypanus sabinus isolate sHypSab1 chromosome 10; sHypSab1.hap1; whole genome shotgun sequence.48290930483627283562049835649590138001679375460.290.290.210.2100.420.9440.00120.99881.98345555631118244922612533643817875360182352814800859441400.280.290.210.2200.430.92620.0980.91261.97480440423863451524374802346917384437015576800.30.250.210.2500.460.86830.30830.75261.94760190304711983246913853987140977313400668180580.290.310.20.200.40.90730.17620.84931.950608786173109040107144777048216003760480.290.260.210.2300.450.87770.27270.77821.95301105259112415780357580798340038413740.290.30.20.2100.410.91380.15190.86821.963402622486908638861143035820.190.240.250.3200.560.87720.26360.77521.964602202299293611521282043620.220.20.280.300.580.87180.08460.9191.981201239914715515885781001712885866995977112978995981521010110359774718950820210110967389061449256377435103801477975104908984959551111985518064594561751059984078060539060357075870028271517963058044778962471129076277615335731935892719482149888238140583877273710948394383593919
GCF_030144855.1NC_082716NC_082716.1Hypanus sabinus isolate sHypSab1 chromosome 11; sHypSab1.hap1; whole genome shotgun sequence.3309252933151269244059672421763492001148765990.290.290.210.2100.420.94540.00480.99531.9829412376788189102601971998013713908139350722800662820200.290.290.210.2100.420.9310.07960.92661.974855670336307643342527281785263595285217011731240.30.250.210.2400.460.86890.30610.75251.95090144943791521277210479185105916692000507800050.290.310.20.200.40.90740.16720.85541.9511073641378012479985586916020502790050.290.270.210.2300.440.87820.25890.78741.9555011100871105628790084793492037992910.290.30.20.2100.410.91350.15360.86641.962101234459486802190.20.260.230.3200.540.86770.31670.73121.963700331271114915511855058260.220.220.260.300.560.90760.13150.87741.980801009910956361461757764916065087355555374357759107627351267158656974575779556964666810727413059367411114135601377174764518791168215925450147618490599058724389481854336702202711246462158605401430584425470563124192328453057476425788919632935267820818849321163972669
GCF_030144855.1NC_082717NC_082717.1Hypanus sabinus isolate sHypSab1 chromosome 12; sHypSab1.hap1; whole genome shotgun sequence.3250435032542096235361692367206882001122628830.290.290.210.2100.420.94530.00350.99651.9817389404793183795731924661513271899136396184800645425050.280.290.210.2200.430.92810.08940.91851.976131613315319634342220280293267901291932011823460.30.250.210.2400.460.86840.30210.75571.95010143959291518925810339604106279403600505563310.290.320.190.200.40.90760.1670.85511.9507069761458416781058601896220902876230.290.260.210.2300.450.87560.28330.76911.9522087108988351963250165718540030446940.290.30.20.2100.410.91070.1640.85881.959202469010311713904490.20.230.260.3100.570.87850.16820.84831.97380000000000NANANANANANANANANANA09761113563679635178321001266066784573972127236113477543256956297145592879196886662411473409757477623118315690376578254460779764695960456146418330642960194419463359986849246611422503260695531468584405510565725272499450856086216736917532992279321118673288958532813
GCF_030144855.1NC_082718NC_082718.1Hypanus sabinus isolate sHypSab1 chromosome 13; sHypSab1.hap1; whole genome shotgun sequence.3217383732319737237246452369284764001119174660.290.290.210.2100.420.9440.00290.99711.9831420386806176289101830005812612729130323582000615760550.290.30.210.2100.420.93040.0840.92231.97544497346315661354008291720265520291182012024300.30.250.210.2400.450.86790.31630.74721.94801344710414113501958152099490731600470927980.290.320.190.200.40.90740.16730.85461.9523067621297014169858514125215102435620.290.260.220.2300.450.87790.28170.77161.9528092883790846268071765842120031766370.290.30.20.2100.410.90770.14760.87531.9575014564829611903610.170.230.270.3300.60.86570.29590.76151.94110000000000NANANANANANANANANANA0990511327394363167850985267347969531873987799120127389268360047205604282437206709411333412358118131113365686399279554910833369016178480447898568643457364125486655026302196311855451857565809405387665985608723822402457056136102795816652669241022189749294260942928
GCF_030144855.1NC_082719NC_082719.1Hypanus sabinus isolate sHypSab1 chromosome 14; sHypSab1.hap1; whole genome shotgun sequence.3205911832200153226722072279579348001097320710.290.290.210.2100.410.94440.00490.99511.9787311322633153336401590707410668067108889701400527991510.290.30.20.2100.410.93230.07430.93041.97213804525025250227701322803718991821105409060220.310.260.20.2300.440.86940.29960.75741.94760120606521259728984011578558717800416186150.290.320.190.200.390.90960.15510.86361.9486058561146334160825438384446402124680.30.260.210.2300.440.87950.28220.77081.94720691233695045485987481079023533440.290.310.20.200.40.91260.14870.87051.957200446875789203130.220.230.250.300.550.86350.270.7741.9700441301118715911901059800.220.230.260.300.560.90230.14410.86641.9829075378704323449895985639049206309392855096849960260601830459555724859564354765907732731823913652680563877306763844001607549135030331241226797439541012473353634384767124210449320842774584281167134686468417191501402341274078562016201672168615257114299350611849
GCF_030144855.1NC_082720NC_082720.1Hypanus sabinus isolate sHypSab1 chromosome 15; sHypSab1.hap1; whole genome shotgun sequence.269661572730771319747710196611976200936889770.290.290.210.2100.420.9440.00850.99161.98172962315271101056911413383786868280658202400383608540.290.290.210.2100.420.92990.07940.92681.97411248123719343021382617777816230117543207293370.30.240.210.2400.460.86970.31830.7451.9473081485418520108582425259397991800284345000.290.310.20.200.40.90580.17140.85291.948805134856822167219455524977402307660.30.260.20.2300.440.87680.28990.76761.9446072148473198650519251828320024771450.290.30.20.2100.410.9150.14630.87041.96420426989711313904470.220.220.250.3100.560.87390.14890.86721.9800331269114815531856058260.220.220.260.300.560.90740.13110.87771.980605832641925273843452759583962488736714255538772594723188236284545391748374336437363822546336054906770329123224935296146824400365728723068527242653323264129413357403414697155274332363578264350783261327417131511292634283566466310621728182914405386166135681771
GCF_030144855.1NC_082721NC_082721.1Hypanus sabinus isolate sHypSab1 chromosome 16; sHypSab1.hap1; whole genome shotgun sequence.258172472604976619239890196851986400907985010.280.290.210.2200.430.94360.01590.98421.98523593757341300609113469959970558698615722000460452080.280.290.210.2200.430.93140.08490.92191.979911882304307611284106228248237937251696010019870.290.230.230.2500.470.86880.32620.74031.94940959900510024870717156572406461000340370860.280.310.20.2100.410.90870.18140.84431.9601050591098142181707637306006502869230.280.260.220.2300.460.87940.26810.78151.95940693136701188509481516127024199320.280.290.210.2100.420.91420.1640.85991.9674032570859512403740.190.230.250.3300.590.86640.24520.78561.96330000000000NANANANANANANANANANA080288944331149306873881953025251492662015715873963382778500958844729692256034926949536195524610510957532730206056325768965871470443323175675055295495399638665050598121748591431148874464379569594434499926622411309251515483751311933081272518397905215553052877
GCF_030144855.1NC_082722NC_082722.1Hypanus sabinus isolate sHypSab1 chromosome 17; sHypSab1.hap1; whole genome shotgun sequence.247387892483001118073216182890177600859386330.290.290.210.2100.420.94470.00780.99231.98282652965611185370412333658872309488296862400417425420.280.290.210.2200.430.92870.09050.91791.97487720921823245022023118516816999418359507589880.290.250.210.2400.460.86980.29620.75961.9528089033589345177653586166289311800314151270.290.310.20.200.40.90760.17030.85291.952104355985864557006409514363102002330.290.270.210.2300.440.88040.26510.78351.95280596703596313421610420901020355270.290.310.20.200.410.90860.17720.85251.9512022454678710503130.170.210.280.3400.610.880.20350.81921.95340202473456491562019820.220.230.250.2900.540.91020.11250.89411.992306520706725404066497361084330484135664515510472784663172836744710393952664600454271242547364949637489353124405055300848614316405130943111536239923791258231763647420513597107307937283579255352053754375816591593288237453885484512121798164413265585194337431730
GCF_030144855.1NC_082723NC_082723.1Hypanus sabinus isolate sHypSab1 chromosome 18; sHypSab1.hap1; whole genome shotgun sequence.2377086523911726180069621795813112400836600840.280.290.220.2100.430.94650.00430.99571.98573342926261130390911873592850306686741353400403581020.270.280.220.2300.440.92410.10530.9051.97961056821922043923070618942219467420907308238750.290.230.220.2600.480.86890.30860.75151.9534087660349287662657246766407172600312694800.280.310.20.2100.410.90840.17180.85171.96059481075945656818447744667902077270.280.260.220.2400.460.87770.28280.77011.95640530721537280393556399405018609620.280.290.210.2200.420.90980.18270.84671.963105023731279126612221635054020.230.230.230.3100.540.86520.2510.7871.971503031260113715431850057900.220.220.260.300.570.90740.13270.87641.980206246778424364830525173844451430742965035445370785640206737814705428254335296394179703115419549608749445724924945257561524450374432402700554947214742332431464085477616207067350345363947384956803970385019531852262441584735561910542468246516465611169641712475
GCF_030144855.1NC_082724NC_082724.1Hypanus sabinus isolate sHypSab1 chromosome 19; sHypSab1.hap1; whole genome shotgun sequence.234131862320526116915511171540684800806928260.290.290.210.2100.420.94510.01150.98861.9824233258491139771541453172210045698102420541200487978280.280.290.210.2200.430.92920.08950.91881.97477198017420137520891717240116167017640107193890.290.240.210.2500.460.86810.30870.75181.950801095122411466781787168880270431000383177360.290.310.20.200.40.90730.16950.85381.953105244966856466380483994778302311260.30.260.210.2300.440.87920.27720.77361.95470588883568901455177418220020311810.290.290.210.2100.420.9120.16030.86281.9633035811114313719005810.190.250.240.3300.560.89640.3210.73191.959803031269114815531856058260.220.220.260.300.560.90740.13110.87771.980605936678722713806468058953882442033174400486469154498163135094331361049964194408466182540344848866913348422724672292551414255370329282759520039413587262331603584408713456879310535573279270749163405344515461387266535513768469010031727150113895068169235021670
GCF_030144855.1NC_082725NC_082725.1Hypanus sabinus isolate sHypSab1 chromosome 20; sHypSab1.hap1; whole genome shotgun sequence.215518922118272215490704155660404600737959580.290.290.210.2100.420.94450.01110.9891.98182212364571063564711061110751021377544761200369626460.290.290.210.2100.420.93030.08380.92361.97327016817634417381214336312683914045205844660.30.250.210.2400.450.86850.32040.74391.946407871381826682455482395722253600274092970.290.320.190.200.390.90940.15820.86141.95048541027903077943541235349602645920.30.260.210.2200.430.87850.28550.77061.9441079745775446956177356218940026762880.290.30.20.200.40.91410.13790.87931.962301234357546602200.20.260.250.300.550.90220.24650.78981.976100331269114815531856058260.220.220.260.300.560.90740.13110.87771.980605114572320613083398046693203379926663465403359483651119329693646303737383463366452312172261238965427259218734173236339993167319722402592414130092787194523252661328392960782233280828471986425226942867121411542455281528633617928121711769474383153828701214
GCF_030144855.1NC_082726NC_082726.1Hypanus sabinus isolate sHypSab1 chromosome 21; sHypSab1.hap1; whole genome shotgun sequence.199429912017913915282418148525384000702610860.280.290.220.2100.430.94510.02020.98011.98532462474931140731711958031844640986701302000404838870.280.290.210.2200.430.92930.0870.92161.97773659220719940621019117191717413918698307432300.290.240.220.2500.480.86950.30180.75611.9555086290049100788634459464872001400305629860.280.310.20.2100.410.90990.16810.85481.960203938774668545127360923570601636100.290.250.220.2300.460.88610.25830.78481.9640426215429674312690316627014852060.280.290.210.2200.420.91630.15690.86461.968402246070748802920.210.240.250.300.550.89960.19460.8271.98050000000000NANANANANANANANANANA0589668712190378750276710414441283771456542566847459718463603429938655033424937747156275438454805743636462186458825875301415435143157246255264369410732102915386645341542645232743599349130225230346933941758167923813922382850859602015200013405063160739031903
GCF_030144855.1NC_082727NC_082727.1Hypanus sabinus isolate sHypSab1 chromosome 22; sHypSab1.hap1; whole genome shotgun sequence.198394731973558014365862144443543600683888690.290.290.210.2100.420.94470.00530.99471.9822462344801143294711850335827369683378251600398964030.280.290.210.2200.430.9290.08890.91911.9757021119040121004316878015636917640207115940.30.240.210.2400.460.86870.31650.74711.945261590487389479667656330465822251200316751340.280.310.20.2100.40.90690.17070.85291.952136983443774760047270350483811401680320.290.260.210.2400.450.87690.29940.76161.94860417615416794298120296201014287300.290.30.20.2200.420.90960.16990.86011.956301233954638002360.160.230.270.3400.610.85510.38230.7121.91220000000000NANANANANANANANANANA05421657222923651477666624143436433054501464474464456166236264241368544103883390764222523318246466572316723054321296349133948355530972833482437723244249828783348404713437489289035153581263455413342341016801518255732513649436511011832168612335254179740101676
GCF_030144855.1NC_082728NC_082728.1Hypanus sabinus isolate sHypSab1 chromosome 23; sHypSab1.hap1; whole genome shotgun sequence.188022591898301713712629140631545200655662590.290.290.210.2100.420.9430.01740.98281.9832272294561041800811038465771464478916722000370647890.280.290.210.2200.430.9280.0950.91491.973419131118017235219861016245715286716926306831970.290.240.220.2500.460.86720.31880.7441.949083311628943386622672763182961600298211710.280.310.20.2100.40.90440.18250.84481.950204049895236551430386573917801816300.290.260.220.2400.450.86970.28530.77141.9488048693248657935287236067740016874600.290.30.190.2100.410.90830.17310.85461.95660471116220320025008150.20.250.250.3100.550.89540.22370.80341.974303031269114815531856058260.220.220.260.300.560.90740.13110.87771.98060543165812100355345636098395041063221438543387027412514733215409435264478404638426785247835454619691031532050441425874560388135652683245546853717329724692740323840151283685829043361321524934951318931691365135224133237349742079751686145713034946156235301570
GCF_030144855.1NC_082729NC_082729.1Hypanus sabinus isolate sHypSab1 chromosome 24; sHypSab1.hap1; whole genome shotgun sequence.10565832104432378800827894042611800387621220.270.270.230.2300.460.94350.01370.98641.994723622245837645653974571335188734149013400145093240.250.260.240.2500.490.91390.14690.8741.978337321731573301027288677811184511676804181190.260.210.260.2800.540.86680.32650.74061.93802542726272526922673652297181200098345410.250.280.240.2400.480.89550.26220.79141.952902830583802736230290483112201344270.280.240.220.2600.480.87350.31260.75691.944601892441857111486441596612006834600.280.280.20.2400.440.89440.23610.8141.9516031296094899612411452046370.20.220.270.3100.580.89310.11650.89471.97410000000000NANANANANANANANANANA029864110902185725204543225615752657285714572890232517421586236018643055306715774764135526891842422026319771830953301826181387212795523762732233925591789361526631504235026702388158024782230166913831551180398421152832258536420841949942208662116551336
GCF_030144855.1NC_082730NC_082730.1Hypanus sabinus isolate sHypSab1 chromosome 25; sHypSab1.hap1; whole genome shotgun sequence.154397991555287911382492114920183800538709880.290.290.210.2100.420.94310.00840.99161.983521419841276697777993336563561958050151400271051470.280.290.210.2200.430.93010.08610.92121.9789107317316834114618612070012004012911605160420.290.240.220.2500.470.870.31230.74961.9513055402845817711405478541551301000195689100.280.30.210.2100.420.90770.17760.84941.95860322557285612722921385217950989700.290.260.220.2400.450.87710.28120.77041.9580313953314822231114234237010941260.290.30.20.2100.420.91120.15150.86961.9633052710112213715205120.20.240.270.300.560.89790.16620.8511.97510000000000NANANANANANANANANANA04445463615462610346045052753291826253435314746763222145924893069262036593193264550821757261631145098263515093124183034513258229922371847373128672688213721442653280199243462153239021792104353225592386126211581734257929133409732148614049323763116026841347
GCF_030144855.1NC_082731NC_082731.1Hypanus sabinus isolate sHypSab1 chromosome 26; sHypSab1.hap1; whole genome shotgun sequence.1332659813344979109184661128425713200488875000.270.270.220.2300.450.93240.01720.98311.993724424448851772555470793464359647509083800200463520.250.260.240.2400.480.91870.1270.88861.98185111020920141015084512736517188017662306267130.250.210.260.2800.540.86620.30030.75931.943253933225843567192296407830103432400128665970.250.270.240.2400.480.8890.28660.77821.942802530555031649307414254358201846300.270.240.230.2500.480.88390.27120.78091.9617031006130939025737424743920011244640.270.280.220.2300.460.90010.21430.82861.96290391221421222729109440.220.220.240.3100.550.88890.16250.85461.97770000000000NANANANANANANANANANA036155745121632753328724630732339425037282004383642952218241029333192431650102073726120233789263668254561136722681169480132322145285212383543376761033755205043223587206231553628426425255413370028612131221625451236324944534219443368132951225294371826082189
GCF_030144855.1NC_082732NC_082732.1Hypanus sabinus isolate sHypSab1 chromosome 27; sHypSab1.hap1; whole genome shotgun sequence.136081121367177610106055100414423000474303850.290.290.210.2100.420.94250.00550.99451.983618518937480930798463417599227861090121400286591860.280.290.210.2200.430.93040.08850.92011.97822733214415630014873112306312298413335005281280.290.240.220.2500.470.86870.31140.74911.9539060990136416123447384645308171200215209990.280.310.20.2100.410.910.16580.85621.961603732695160150430387284057901813380.280.250.220.2400.460.87660.29490.76381.9531050375850860339625341871120018275250.280.290.210.2200.430.90860.18480.84681.96150011131818230720.180.250.250.3200.570.8870.28320.75241.97180000000000NANANANANANANANANANA0427248371611268734934692287529762746343929664693325014732679308726043773302026735158186028853264515927591607323318563705305525312248178236522878273020652249269332311142445422722708232320373757256124831176129116682636291135227031530131710703628124428621355
GCF_030144855.1NC_082733NC_082733.1Hypanus sabinus isolate sHypSab1 chromosome 28; sHypSab1.hap1; whole genome shotgun sequence.1337095213344858987995398380833000464368460.290.290.210.2100.420.94010.00310.99691.983517516934474980537877797554566257437541600266668660.280.290.210.2200.430.92870.09060.91871.97559705713213026214617611968211461012480705052750.30.240.220.2500.460.86940.31360.74921.9496454685915824769406007842212631200195759010.280.310.20.2100.410.90780.16920.8541.956604034745527453826387944083601887300.30.260.210.2300.440.87580.30160.75831.947053689553742838489638359120018430100.290.30.210.2100.420.91180.14350.87691.96340426769311715204380.170.210.270.3500.610.90610.23390.79251.94780000000000NANANANANANANANANANA03968479815872433336243422741309324033325320250453088126024683181259234392836278348561711255233614886253615733170190133932797265519651925342728832474183222162478294993746992070249123451843349623002503117011521905243425523267748137612538893707116425351277
GCF_030144855.1NC_082734NC_082734.1Hypanus sabinus isolate sHypSab1 chromosome 29; sHypSab1.hap1; whole genome shotgun sequence.1171818011530460975562498501029000428633660.270.270.230.2300.460.94550.01290.98721.994627828256057862336033155494004149489223200217115510.260.270.230.2400.470.92050.120.89431.98415939622121843917108813357617113317979906555960.270.210.250.2700.520.86630.33370.73531.947459338909284102483329369133328561800146217580.260.280.230.2300.460.89710.26050.79451.952204750974282842597338523853001578070.260.260.230.2500.480.87450.2680.78351.9633019194319705516072716032107100460.270.270.220.2400.460.89180.2580.79841.9552041014192239291360010820.180.220.270.3300.60.88180.21480.80921.95650000000000NANANANANANANANANANA046206557147430033953682035362622400741602747476338752197263438533111457739652257700323303941331870354138168129361438499237142330296215064156430039774169259845994473212541033566345823273876459825982524191121711362341548904592624301125571485369191331702165
GCF_030144855.1NC_082735NC_082735.1Hypanus sabinus isolate sHypSab1 chromosome 30; sHypSab1.hap1; whole genome shotgun sequence.1196495412049769887437287599172400416514120.290.290.210.2100.420.93890.010.991.9831301382685836574602075442896394383633600205312000.280.290.210.2200.420.93130.08350.92291.977101031062098975272714704407771203106180.30.240.220.2500.470.86910.32490.73961.949203712690386150327408352755250200130704780.290.310.20.2100.40.91090.15920.86131.958502431553067630293231022337601074470.30.250.210.2300.450.87580.29330.76441.9498050746051090536830237894320017658100.290.30.20.2100.410.90980.14510.87531.95901234751487402200.210.230.220.3400.550.90020.29410.74961.970501013237404501540.210.240.260.2900.550.8870.13130.87691.989102562302298314732106276516691812151418861855316218847161579179015092132184416972922110916002179327315379171946115421921819147011741134208417731637115813281467176155729171391152714761270212314371459696673109915281567206142981872554022636491455760
GCF_030144855.1NC_082736NC_082736.1Hypanus sabinus isolate sHypSab1 chromosome 31; sHypSab1.hap1; whole genome shotgun sequence.10394992104056149450154949145215800397580120.260.260.240.2400.480.92530.00270.99731.998230935666539431994133970382958340035334800159150850.230.230.260.2800.540.90.21230.82021.97048707180186366856286524110679211030303679640.240.180.280.300.580.86610.32270.74261.9323030803433225563298030031399114000124301170.230.250.260.2600.520.88250.28150.78061.94901932512986028975281622546901124660.250.250.240.2500.490.88310.2880.7671.9603014780915298912924412957405596160.250.280.240.2300.470.90460.22780.8161.9643010513323832543978459156290174520.190.230.260.3200.590.88320.26840.76981.96160000000000NANANANANANANANANANA0217749155971370192740072446954252819348942115153215431014184913762970219584844151589211619713526263057810175122768260192220263991472261821733129158038792639218128603477179112772497158291610291503242940719902256225413227162414965129229010141176
GCF_030144855.1NC_082737NC_082737.1Hypanus sabinus isolate sHypSab1 chromosome 32; sHypSab1.hap1; whole genome shotgun sequence.1692853173184214442121387362160062578690.270.280.230.2200.450.93880.03150.96911.993228255349790853015542727248289940019386340.250.270.230.2500.480.91960.14240.87591.983162238202141158111388116983177650644400.250.20.260.2900.550.86510.28880.76511.9497024218027253622869825361009970240.240.270.240.2500.50.87620.36260.72391.9334052763976261486350990226200.270.230.230.2600.490.88170.28920.76761.957306235763665413956109902285160.270.280.20.2500.450.89720.20740.82911.9697022444708110402990.140.240.270.3500.620.82380.4990.64431.87520000000000NANANANANANANANANANA0296581174564216664288219431420163263720182226319358343650192741188303239846470172281103627343127264112372407576334163295305154328267514360612381419298194138124272536391433663299933399342272
GCF_030144855.1NC_082738NC_082738.1Hypanus sabinus isolate sHypSab1 chromosome X1; sHypSab1.hap1; whole genome shotgun sequence.199706881970365014907175151314436200697191560.290.280.210.2200.430.9420.01420.98591.9861264254518986095010379547743139775076612000351815550.280.290.210.2200.430.92860.09380.91461.97689866522721243920277116609516728017913907152850.290.240.220.2500.480.86760.32480.7411.9494070161047459784531191853437841800251333900.280.310.210.2100.420.90350.19990.83341.952410423334674291841574316593094301470940.30.260.210.2300.440.87470.28970.77051.94530462840461595338245339679016023590.290.30.20.2100.420.91410.14730.8721.96440651116620219424208040.210.250.240.300.540.8910.20820.81561.97740000000000NANANANANANANANANANA0590967392030358947726472418440193741426442106751435315633534442235964831424337936727318439354799715738122039429725325151408132972952233449143996360231862874381341741375637333653580318627774842334833191474146921323816372350378321774157313785138146236281698
GCF_030144855.1NC_082739NC_082739.1Hypanus sabinus isolate sHypSab1 chromosome X2; sHypSab1.hap1; whole genome shotgun sequence.1295410412925292964178195074722800450314490.290.290.210.2100.430.94320.00810.99191.98381301202505717595597822541907024192426800200797480.290.290.210.2100.420.93140.07620.92981.9757010310120410073283200796898425403478750.290.240.220.2400.460.86970.3170.74651.952404301103453483631512043142268600151300110.290.310.20.200.40.91110.15820.86181.959502919483210230918228172325301090900.290.260.220.2300.450.88070.27110.77791.9594029271228661521197320722809985280.30.30.20.200.410.91620.12320.88921.96390000000000NANANANANANANANANANA0000000000NANANANANANANANANANA0294029401104193523952666190620231743218421343199242879517512093180623961970183132941218181422353473173011372231127124051888173213921304265917031799129313811626208756931171394176815991264256317391746734616124617501757259352473868459526239202077823
GCF_030144855.1NC_082740NC_082740.1Hypanus sabinus isolate sHypSab1 chromosome Y; sHypSab1.hap1; whole genome shotgun sequence.401825462476311010401309015766200.250.290.20.2500.450.93820.19690.82191.986154927026828198619487920151209486450.290.30.210.2100.410.93640.08210.92311.976043740913806333639770152100.250.250.220.2800.50.85720.33520.73051.932015127515717110468311036505234940.30.340.180.1800.350.8880.2110.82141.90450101674749487379022890.260.310.190.2400.430.88780.28080.76021.960902121234513271488072810.260.340.210.1900.40.91630.28880.7591.94770000000000NANANANANANANANANANA0000000000NANANANANANANANANANA01221274479122127162103486410318476279178105938077973045214711856479543132716846391007441504659511813510635101349646731524432294312111221555108193621