GBRAP

Genome-Based Retrieval and Analysis Parser


Fish : Lepisosteus_oculatus
Assembly Assembly Locus_ID Locus_ID Version Version Definition Sequence description bp_chromo_A Total number of 'A' nucleotides in the whole sequence bp_chromo_T Total number of 'T' nucleotides in the whole sequence bp_chromo_C Total number of 'C' nucleotides in the whole sequence bp_chromo_G Total number of 'G' nucleotides in the whole sequence bp_chromo_N Total number of 'N' nucleotides in the whole sequence bp_chromo_tot Total number of nucleotides in the whole sequence fr_chromo_A Frequency of 'A' nucleotides in the whole sequence fr_chromo_T Frequency of 'T' nucleotides in the whole sequence fr_chromo_C Frequency of 'C' nucleotides in the whole sequence fr_chromo_G Frequency of 'G' nucleotides in the whole sequence fr_chromo_N Frequency of 'N' nucleotides in the whole sequence GC_chromo Percentage of ā€˜Gā€™ + ā€˜Cā€™ nucleotides in the whole sequence topo_entropy_chromo Topological entropy of the whole sequence chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee shannon_chromo Shannon entropy of the whole sequence n_gene_pos Number of genes in the positive strand n_gene_neg Number of genes in the negative strand n_gene_tot Total number of genes in the chromosome bp_gene_A Number of 'A' bases in total genes bp_gene_T Number of 'T' bases in total genes bp_gene_C Number of 'C' bases in total genes bp_gene_G Number of 'G' bases in total genes bp_gene_N Number of 'N' bases in total genes bp_gene_tot Total number of bases in total genes fr_gene_A Frequency of 'A' bases among total gene bases fr_gene_T Frequency of 'T' bases among total gene bases fr_gene_C Frequency of 'C' bases among total gene bases fr_gene_G Frequency of 'G' bases among total gene bases fr_gene_N Frequency of 'N' bases among total gene bases GC_gene Percentage of 'G' and 'C' bases in total genes topo_entropy_gene Topological entropy calculated from total gene sequences chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes shannon_gene Shannon entropy score for total genes bp_gene_overlap_tot Number of bases overlapping between genes on two strands n_cds_pos Number of CDS in the positive strand n_cds_neg Number of CDS in the negative strand n_cds_tot Total number of CDS in the chromosome bp_cds_A Number of 'A' bases in total CDS (coding sequences) bp_cds_T Number of 'T' bases in total CDS bp_cds_C Number of 'C' bases in total CDS bp_cds_G Number of 'G' bases in total CDS bp_cds_N Number of 'N' bases in total CDS bp_cds_tot Total bases in total CDS fr_cds_A Frequency of 'A' bases among total CDS bases fr_cds_T Frequency of 'T' bases among total CDS bases fr_cds_C Frequency of 'C' bases among total CDS bases fr_cds_G Frequency of 'G' bases among total CDS bases fr_cds_N Frequency of 'N' bases among total CDS bases GC_cds Percentage of 'G' and 'C' bases in total CDS topo_entropy_cds Topological entropy calculated from total CDS sequences chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS shannon_cds Shannon entropy score for total CDS bp_cds_overlap_tot Number of bases overlapping between CDS on two strands bp_cds_intron_A Number of 'A' bases in total introns between CDS bp_cds_intron_T Number of 'T' bases in total introns between CDS bp_cds_intron_C Number of 'C' bases in total introns between CDS bp_cds_intron_G Number of 'G' bases in total introns between CDS bp_cds_intron_N Number of 'N' bases in total introns between CDS bp_cds_intron_tot Total bases in total introns between CDS fr_cds_intron_A Frequency of 'A' bases in total introns between CDS fr_cds_intron_T Frequency of 'T' bases in total introns between CDS fr_cds_intron_C Frequency of 'C' bases in total introns between CDS fr_cds_intron_G Frequency of 'G' bases in total introns between CDS fr_cds_intron_N Frequency of 'N' bases in total introns between CDS GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS shannon_cds_intron Shannon entropy score for total introns between CDS bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands n_ncRNA_pos Number of ncRNA in the positive strand n_ncRNA_neg Number of ncRNA in the negative strand n_ncRNA_tot Total number of ncRNA in the chromosome bp_ncRNA_A Number of 'A' bases in total ncRNA bp_ncRNA_T bp_ncRNA_T bp_ncRNA_C Number of 'C' bases in total ncRNA bp_ncRNA_G Number of 'G' bases in total ncRNA bp_ncRNA_N Number of 'N' bases in total ncRNA bp_ncRNA_tot Total bases in total ncRNA fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA shannon_ncRNA Shannon entropy score for total ncRNA bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands bp_nc_intron_A Number of 'A' bases in total introns between ncRNA bp_nc_intron_T Number of 'T' bases in total introns between ncRNA bp_nc_intron_C Number of 'C' bases in total introns between ncRNA bp_nc_intron_G Number of 'G' bases in total introns between ncRNA bp_nc_intron_N Number of 'N' bases in total introns between ncRNA bp_nc_intron_tot Total bases in total introns between ncRNA fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA shannon_nc_intron Shannon entropy score for total introns between ncRNA bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands n_tRNA_pos Number of tRNA in the positive strand n_tRNA_neg Number of tRNA in the negative strand n_tRNA_tot Total number of tRNA in the chromosome bp_tRNA_A Number of 'A' bases in total tRNA bp_tRNA_T Number of 'T' bases in total tRNA bp_tRNA_C Number of 'C' bases in total tRNA bp_tRNA_G Number of 'G' bases in total tRNA bp_tRNA_N Number of 'N' bases in total tRNA bp_tRNA_tot Total bases in total tRNA fr_tRNA_A Frequency of 'A' bases among total tRNA bases fr_tRNA_T Frequency of 'T' bases among total tRNA bases fr_tRNA_C Frequency of 'C' bases among total tRNA bases fr_tRNA_G Frequency of 'G' bases among total tRNA bases fr_tRNA_N Frequency of 'N' bases among total tRNA bases GC_tRNA Percentage of 'G' and 'C' bases in total tRNA topo_entropy_tRNA Topological entropy calculated from total tRNA sequences chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA shannon_tRNA Shannon entropy score for total tRNA bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands n_rRNA_pos Number of rRNA in the positive strand n_rRNA_neg Number of rRNA in the negative strand n_rRNA_tot Total number of rRNA in the chromosome bp_rRNA_A Number of 'A' bases in total rRNA bp_rRNA_T Number of 'T' bases in total rRNA bp_rRNA_C Number of 'C' bases in total rRNA bp_rRNA_G Number of 'G' bases in total rRNA bp_rRNA_N Number of 'N' bases in total rRNA bp_rRNA_tot Total bases in total rRNA fr_rRNA_A Frequency of 'A' bases among total rRNA bases fr_rRNA_T Frequency of 'T' bases among total rRNA bases fr_rRNA_C Frequency of 'C' bases among total rRNA bases fr_rRNA_G Frequency of 'G' bases among total rRNA bases fr_rRNA_N Frequency of 'N' bases among total rRNA bases GC_rRNA Percentage of 'G' and 'C' bases in total rRNA topo_entropy_rRNA Topological entropy calculated from total rRNA sequences chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA shannon_rRNA Shannon entropy score for total rRNA bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands ATG ATG AAG AAG GTA GTA ACT ACT GCA GCA GAG GAG GCT GCT ATT ATT TCC TCC TGG TGG AAT AAT GAA GAA TCA TCA ACG ACG AGT AGT AAC AAC TCT TCT GTG GTG TTC TTC TTT TTT CTG CTG GGT GGT CTC CTC GAT GAT CAG CAG ACC ACC CTA CTA TTG TTG TAT TAT GGA GGA ATC ATC CTT CTT GTC GTC ATA ATA ACA ACA GAC GAC CAC CAC CCC CCC TAC TAC GCC GCC AGC AGC CGC CGC AAA AAA GGC GGC TGC TGC GTT GTT GGG GGG AGA AGA TGT TGT CAT CAT TCG TCG GCG GCG TTA TTA CCT CCT AGG AGG CCA CCA TAG TAG CGG CGG CCG CCG CGT CGT CAA CAA TAA TAA TGA TGA CGA CGA
GCF_000242695.1NC_023179NC_023179.1Lepisosteus oculatus isolate Spotted Gar 1 linkage group LG1; LepOcu1; whole genome shotgun sequence.198887561982513112568790125220274260492690651960.290.290.180.180.060.360.95320.00350.99651.928170066613661150429812327556745435478750121765165409263850.270.290.190.20.040.40.92580.08710.91871.938478162358812115671894670465425705710579521479570.270.220.240.2700.510.86380.31580.74761.9444086926589452797544871857509941562451309076180.280.320.190.190.030.380.8950.17310.85111.9081057601174628644959351143686401632230.290.250.220.2500.470.87330.29510.76451.94570243902250179157128159597412978521030.280.310.190.20.030.390.89720.1680.85621.92180161228358499549658020640.170.240.260.3200.580.88030.27060.77261.960000000000NANANANANANANANANANA0157031958551879960138092165013217939212547143259266164601204961689266120851133715528120711030624729674312280109312315212048576210137617315028113899661904861541451214171113481290785801434015239658816125118071211677451153615714990787175011654956561249813665142292723696467533471116143763100784808
GCF_000242695.1NC_023180NC_023180.1Lepisosteus oculatus isolate Spotted Gar 1 linkage group LG2; LepOcu1; whole genome shotgun sequence.195311171952627612483170124757114559579685758530.280.280.180.180.070.360.950.00040.99961.926872975214811144458212277796751485779465151783619409673690.270.280.20.210.040.410.92510.09180.91471.93953368961064612565704454661445710605959105322036120.270.220.240.2700.510.86460.31440.74781.9428085232159294479537603856807311492104303665670.270.310.190.20.030.390.89260.18290.84471.9052076661425495854188420534356101947600.280.250.230.2400.460.87440.2730.77861.951802997133156661951452013225340010652460.290.310.190.190.020.380.89960.14790.87061.93120333265898113612731603049100.190.230.260.3300.580.87930.24920.7841.9620000000000NANANANANANANANANANA015734192205247101351419022959135928676131841470988251620412123650693961202911136159301251094172534272171298211081236841273556559586587615756118459352972658871466314441117671441286111561915833717815570132101245276221268615763955187765316755651821364314136152932633785374913823117843636104775303
GCF_000242695.1NC_023181NC_023181.1Lepisosteus oculatus isolate Spotted Gar 1 linkage group LG3; LepOcu1; whole genome shotgun sequence.164159721642537810810317108328872314338567988920.290.290.190.190.040.380.95120.00130.99871.946673477515091091610911734659739973778330651016762389003320.280.30.20.210.020.410.92620.09120.91491.957710248665268013326016005065856149466362926423594870.260.220.250.2700.520.86570.31460.74811.945707495025822050949282255223034771861266386540.270.320.190.20.010.40.89650.1720.851.9359656467811486214459913464634730902158290.290.250.220.2400.460.87430.26320.78621.953603117153160901977662026721200110402440.290.320.190.20.010.390.90040.14720.87151.944207815216268279346011090.190.240.250.3100.560.89810.21790.8091.97020000000000NANANANANANANANANANA01672920304555710643155632436914771988114807159469175164531342377199911129401240317776136911068028179748014166113292524213734588810358638916392131981005310439626415851156231227414956948616521177627582153651379413510806612888162371059191096001802356791474915695163332635843579714039116553513106895714
GCF_000242695.1NC_023182NC_023182.1Lepisosteus oculatus isolate Spotted Gar 1 linkage group LG4; LepOcu1; whole genome shotgun sequence.205541472053208013014014130141476083894731982820.280.280.180.180.080.360.95070.00050.99951.91554760111481081233111578534710535875181011593382386077060.270.290.20.210.030.410.92820.08580.91961.945325749053910294848243959674845525089316218743360.270.220.250.2700.520.86420.31990.74511.9412181506868862188521257155121171408164291457260.270.320.190.20.020.390.89680.16980.85341.918604841893696137362292062987301334020.280.260.230.2400.470.87440.27290.77811.95090192711196667120327122255278966598560.290.310.190.20.020.390.89760.16440.85881.93207815188257291363010990.170.230.260.3300.60.89320.26960.77081.95370000000000NANANANANANANANANANA013171164664354843012267189631176675031093212368764513870101426079802610455941213620105498332215956197109519361201601056247458123480713571963778938193488112185124919975120937221134901369561121304111116105586475106171374783897651474867124441115221230612616222767936500330210143299087984509
GCF_000242695.1NC_023183NC_023183.1Lepisosteus oculatus isolate Spotted Gar 1 linkage group LG5; LepOcu1; whole genome shotgun sequence.1486953014802001938355293583963003568514170470.290.290.180.180.060.360.95070.00360.99641.935846471231981346310538099632557367180181149509345446620.270.290.190.210.040.40.92540.08580.91971.93852377051556610814927893976334776885058424518739970.270.220.240.2700.510.86480.32120.74421.944407150097781969644487724726114938456250831350.280.320.190.20.020.380.89270.17880.84661.9096051541052972328349227952347701043440.280.250.220.2400.460.86660.29290.76731.94230256078259789154019153991184968423730.290.320.190.190.020.380.89830.15430.86671.9215091524362404430560017560.210.230.240.3200.560.8790.23880.7961.96790000000000NANANANANANANANANANA01320116712435988341208919365115437688111871245978471446510398581181791051596341379910254812821160613310711961320209107414629840950051351999698089823849141293412383966011696750212511135325614141201046110555652310636140168359715345496173442811449126761277122806423626632539707309186424284
GCF_000242695.1NC_023184NC_023184.1Lepisosteus oculatus isolate Spotted Gar 1 linkage group LG6; LepOcu1; whole genome shotgun sequence.1147093811404415788628378536442153457407687370.280.280.190.190.050.390.95420.0050.9951.945521546106765362277016753467586849390561055912242238160.260.280.20.210.040.420.92610.08880.91691.94091356864434729153585722900593924814071857414483710.260.210.260.2800.540.86190.33480.73521.936604421330485160430672043246231872874164592430.260.30.20.210.030.410.8910.20420.82961.9079065601255229951069410424307201874820.270.250.230.2500.480.87660.25410.79061.95620274940285498182945184903272729555580.280.310.20.20.020.40.89980.14710.87161.929809716242267304359011720.210.230.260.3100.570.87880.14760.8671.9780000000000NANANANANANANANANANA0972212931318562989073163458896500092089505498696907501512255927792701810911822754791749746618908688816098880133525364313310669778154036647329386961038476341096058401127011129568185979350811244719487985856884982405360972840920799261022413756168617226676874166260403871
GCF_000242695.1NC_023185NC_023185.1Lepisosteus oculatus isolate Spotted Gar 1 linkage group LG7; LepOcu1; whole genome shotgun sequence.1439990714448231927660292779193409568508122270.280.280.180.180.070.370.95120.00170.99831.9273543495103881250558728247539558257314821043871290242370.270.290.20.210.020.410.92820.08690.91841.9569172664654399044256853409544299334491834916458040.270.210.250.2700.520.86470.32170.74321.944205762106632866137200013959875855993206266360.270.320.190.20.010.390.89570.17560.84741.9299066501164245041302319103326401489260.280.240.230.2400.470.87250.26020.78911.9522025855626387116543216817898018658380.290.310.190.190.010.390.90030.13690.88031.93860751216521222629008930.190.240.250.3300.580.89030.2750.76511.96260000000000NANANANANANANANANANA01140414883369173231056718012102366356996910739651712392887053306898915882571200591206876195565242999883051807395644019688539991177786766746714939581053911371891710817648411806124795432115439818938752619169118656875627341365674358810247112711134818096100587128378590240673503988
GCF_000242695.1NC_023186NC_023186.1Lepisosteus oculatus isolate Spotted Gar 1 linkage group LG8; LepOcu1; whole genome shotgun sequence.1468193814759872901117790412602854261503485080.290.290.180.180.060.360.95050.00430.99571.9265438435873969959010368279604527163986741259078337708920.280.30.190.20.040.390.92680.08230.92251.9298196333843887723940093250403546043775503514512380.280.230.230.2600.490.86550.31790.74561.945907229935783293844046394659295994501251213080.280.320.180.190.020.370.89540.16130.85951.90760453378263572614019768204900927550.280.250.230.2400.470.87320.28490.77321.944803519393651832214982291962319711910130.290.310.190.20.010.390.90310.13550.88211.9332045913215316220706540.20.240.250.3200.560.88710.25280.78251.96810000000000NANANANANANANANANANA0107701336239277024914414617880167097995918168091196181033984657782167787102688374746315904463884467993153847503420873264596103397575704863034591101209186743677195706877796643572117727135799555557055109076918632431203961426385188969958319474247400423838460285567953208
GCF_000242695.1NC_023187NC_023187.1Lepisosteus oculatus isolate Spotted Gar 1 linkage group LG9; LepOcu1; whole genome shotgun sequence.1554970015588417957664995781782948441532413850.290.290.180.180.060.360.95090.00130.99871.927844548192690468039685915570309860506621108961315954390.280.290.190.20.040.390.9250.09120.91571.933449883664017673926863179033666373907761514680170.280.230.240.2600.50.86580.31780.74571.94706759708735186541586674405293910926235864590.280.320.180.190.020.370.89730.16080.86011.9127054511053507833096257762596101199110.290.250.220.2300.460.87290.28430.76931.95050268319270694163449165309172368850070.30.320.190.190.010.370.89850.14490.87371.929502124456287948271047032960.190.240.250.3200.570.87910.25530.78151.96330000000000NANANANANANANANANANA01088513543359969959622145959043638385949368649911637820342086695822775301074582146905160514740837674931610277853940692442641045574696679635342001029595957682850956739215104204040114538042793552777709111516713584334694669383187809806965718444712465925068029260470613349
GCF_000242695.1NC_023188NC_023188.1Lepisosteus oculatus isolate Spotted Gar 1 linkage group LG10; LepOcu1; whole genome shotgun sequence.1219424312178976794070379357112095849423454820.290.290.190.190.050.370.95040.00090.99911.939851252210347704584828213051863815512337784012274694440.280.290.20.210.020.410.92720.08780.91781.95364639425453878435186349687432534456486616738990.270.220.250.2700.520.86420.31950.74451.945505622541619019936799073916383636837200458670.280.320.190.20.020.390.89280.17970.84461.9219068561244728745495356843672801651940.280.250.230.2500.470.87240.28090.77471.9480277588284891186115191449225479625900.280.310.190.20.010.40.90230.13950.87771.9449012618263295325432013150.20.230.240.3300.570.87830.29140.75251.96070000000000NANANANANANANANANANA01194315358388576831117918206107776493988711194648012521931652287085893183471251193666949196935486987881501901795184274717341551207086277099726740771134811036866610572647311714121595229116709708950655499333122686934658839375683379210399111901177818895805562729588900262577764077
GCF_000242695.1NC_023189NC_023189.1Lepisosteus oculatus isolate Spotted Gar 1 linkage group LG11; LepOcu1; whole genome shotgun sequence.1239017912441464763004076552061411341415282300.30.30.180.180.030.370.94890.00370.99631.94043934078007823401840580249039545239240588446269608430.280.30.190.20.020.390.92840.08330.92141.95147916342352694343670279549321056342751412870300.280.220.240.2700.50.86520.31880.74551.946405785473632216535362823779998492307199162250.280.330.180.190.010.380.89770.1610.85891.924404348913904837954273972773301321320.290.250.220.2300.460.87940.24920.79531.956904579214687262671642720802732714932180.30.320.190.190.010.370.90560.12320.89081.9346053811814114718705930.20.240.250.3200.560.90110.20760.81451.97720000000000NANANANANANANANANANA09485119613134598385891307581715782734779915614105197180387257117182667694407139626414069443273796774139706720338661523633957367615984563438418725831167257207487484129331350110239722769214845656493335645521530304007344977408136849215074077399122597009218655572946
GCF_000242695.1NC_023190NC_023190.1Lepisosteus oculatus isolate Spotted Gar 1 linkage group LG12; LepOcu1; whole genome shotgun sequence.1012670910182858651270865365113064978364237640.280.280.180.180.080.360.95070.00460.99541.916342342785065326046982451425949045221421148265234449520.260.280.20.210.050.40.92420.08940.91671.9223332636636372939265331561236293539184610314631490.270.220.240.2700.510.86490.31710.74661.944104720443515002029715913146953951511169405180.280.320.180.190.030.380.89030.18520.8421.897704451952997028709245082517201083590.280.240.230.2500.490.87220.27770.77521.9510185063190004125599127188495176773710.270.30.190.20.030.390.89430.14840.87221.9187054913115916221106630.20.240.240.3200.560.87910.22620.79961.96820000000000NANANANANANANANANANA01137313935355166799541146408614611584039788628211428852040486389813272451077380126553165445146795973851592777294102766040951053473386390622042791018891267629849855369084100894204115468023755051037951109866297604433544706421387269728981221484766462223318314295371203393
GCF_000242695.1NC_023191NC_023191.1Lepisosteus oculatus isolate Spotted Gar 1 linkage group LG13; LepOcu1; whole genome shotgun sequence.4717839469872734295433412371856572171150520.280.270.20.20.050.40.95180.00450.99551.9532792745533444509373092325922372744521335171128473610.260.280.210.220.020.440.92880.09520.91151.96537310232213445180016149721216972219803127665240.250.210.270.2800.550.8640.30680.75331.940232424525931841695002181306528114687066420.250.30.210.220.020.430.89710.18960.83721.93910435497258372675622225236960985140.250.260.230.2600.490.86870.28780.76691.95140308603322219217502223193901810805350.270.330.190.20.010.390.89280.19680.83181.932102467610311715704530.170.230.260.3500.60.88310.29540.75281.94280000000000NANANANANANANANANANA0454165301365297147598729499721345252527020444800368628152662394234885824445726071011724265125324288704762167825611486561742812930368913134116552943666045309765906178348537545617464221994795481429972780232435921179504552335131627365036681625361489032322304
GCF_000242695.1NC_023192NC_023192.1Lepisosteus oculatus isolate Spotted Gar 1 linkage group LG14; LepOcu1; whole genome shotgun sequence.89888929004510574832057574822870221323694250.280.280.180.180.090.360.95060.00170.99831.91273714187894957700529843432549343450360675404176368320.280.290.190.210.030.40.92490.08770.91851.943789613103666763005932560922846042979897011393480.270.220.240.2700.510.86660.31380.74891.946903394312370633821730712308416563532121456690.280.320.190.20.020.380.89350.17770.84641.92160433073233582213716623173950795130.290.250.220.2400.460.86650.27450.77821.94930273892281796168503170638477439425720.290.320.180.190.020.370.90020.12290.89061.92230151833414564608803023890.170.240.250.3400.590.89090.29590.75011.95370000000000NANANANANANANANANANA07991962928835616745611202707052026636770854738718672132635046681760838389702162071277337126513592612158625330355606363079646252518149403575795769456029643545667063769530238471600467664314603777635384464926833376326665787020748815143600329019006296193048272475
GCF_000242695.1NC_023193NC_023193.1Lepisosteus oculatus isolate Spotted Gar 1 linkage group LG15; LepOcu1; whole genome shotgun sequence.2822255285373522347802247699483579106420480.270.270.210.210.050.420.9510.00840.99161.9636169190359192263020909241571911166439519195574418150.250.270.220.230.030.450.92880.08960.91621.96761496515215330511258689554142967145418104905350.240.190.270.2900.560.860.32880.73971.9317012025601340695956499101532114829246633670.250.290.210.220.020.440.89680.19140.83671.94030152035119801143510814107940450230.260.230.250.2600.50.8760.27230.78191.952807870781549636136515471042961270.280.290.210.210.010.420.90110.14830.87131.9552031316240267285374011660.210.230.240.3200.570.88050.20240.82561.97230000000000NANANANANANANANANANA030664396802185032116051316211413659320611602636216419641743263621263815267813116395170131291946540433359411365771352127581500232070427483801277143502039465841722461207441612879113136103040174515901653264557131183415334331225992459983208639818851412
GCF_000242695.1NC_023194NC_023194.1Lepisosteus oculatus isolate Spotted Gar 1 linkage group LG16; LepOcu1; whole genome shotgun sequence.6318248632875740509804056148420313211744460.30.30.190.190.020.380.95120.00150.99851.95452652475124259260461552928045013011563222649149135020.280.30.190.210.010.40.92910.08780.91731.96021734235216451234296191214233510251377109104070.270.220.240.2700.510.86520.3150.74791.946503253437359898820771512232693193507113557760.280.320.190.20.010.390.89620.16720.85381.93540272350236002268215580161990780610.290.250.230.2300.460.87780.26710.78071.954016227316732810168510401971635424680.30.310.190.190.010.380.90470.12470.89021.938601345664799302920.190.220.270.3200.590.85720.20730.81631.96440000000000NANANANANANANANANANA062948084196539346137971659573526541161783403683548223040386848934662656548713952106573100531747599933482221963868225468624570405739992226572561984811545534956349683528146337558451823149515466603971362123213290212156496207612810073417310316954647144343592357
GCF_000242695.1NC_023195NC_023195.1Lepisosteus oculatus isolate Spotted Gar 1 linkage group LG17; LepOcu1; whole genome shotgun sequence.94149369459769578230457975912140667325952670.290.290.180.180.070.360.94650.00370.99631.92123083066145370568575989634099963625807462430186286970.280.30.190.20.020.40.92740.0810.92371.95393767283271554257201210684245417259913189732330.270.220.240.2600.50.86620.3140.74821.947104128547450584825532662714946407370143099770.280.320.180.20.020.380.89890.15850.86031.92620222951220052213315298156940751300.290.260.220.2200.440.87320.24940.79651.94970130390132179755967741928484184320.310.330.180.1800.360.89810.13240.88241.933053811214416620206240.190.230.260.3200.590.85590.32150.73371.95120000000000NANANANANANANANANANA0704888712335439962129415587643005591668141417403553832064280538549297011550446661088530885699469410471533325684598258868695192436242212731666162995068569838146275713527077266531254883478512272724373387523993125253558596676659613173244326216675154175348122377
GCF_000242695.1NC_023196NC_023196.1Lepisosteus oculatus isolate Spotted Gar 1 linkage group LG18; LepOcu1; whole genome shotgun sequence.4483776445180331005133095894550619156826050.290.280.20.20.040.40.94970.00430.99571.9566201232433268752928811501926302203328920660397348730.270.290.210.220.020.430.92810.08740.91861.96222003174199373154524122681170896174365496225150.260.20.260.2800.540.86390.32790.73911.93870165766318231971156813122714016883460336470.260.310.20.210.020.410.89690.17920.84511.93130242953248672442420134204160898410.280.250.230.2400.470.88040.24150.80221.95830291971306827194672201172600910006510.280.310.20.200.40.90620.13490.88161.9565023557879712303640.160.240.260.3400.60.86840.33460.72711.94330000000000NANANANANANANANANANA042055607125225843976684037871982403740952170406632202166242735352833466836222210746419803875276467913914141221551261449235882352285012773749448935174626249049635123243736864219380117643794425624382289177325691001388943934431533275626561183307375626121699
GCF_000242695.1NC_023197NC_023197.1Lepisosteus oculatus isolate Spotted Gar 1 linkage group LG19; LepOcu1; whole genome shotgun sequence.252020925488892049714205668773498599104840.250.260.210.210.070.410.95240.00740.99271.9472187196383171839418796511450834153336130965468918940.240.260.220.230.040.450.9280.09880.90811.9539523616616633211212489268145434147994814949010.240.190.280.2900.570.85920.33230.73721.929301074706121563888896894186725535843765370.240.290.220.230.030.440.89390.21230.82011.92133131122234109129931923192750393490.270.220.250.2600.510.87340.27370.77821.9488093395981236924070595148073461600.270.280.220.210.020.420.89880.15740.86691.9416045913416016320906660.20.240.240.3100.560.86870.25190.7831.97040000000000NANANANANANANANANANA0295842878421833319361033186106534323434102527522319225318012557211637612719122464251547307319835589337096813477563590279314782314594262736762827451919274794426325601984395830361167362030361772157517142889538324334873398355280627141151202438618101505
GCF_000242695.1NC_023198NC_023198.1Lepisosteus oculatus isolate Spotted Gar 1 linkage group LG20; LepOcu1; whole genome shotgun sequence.4097144401430528630392829293935803147395840.280.270.190.190.060.390.95210.01610.9841.9407205243448260656428435151910572204269843455698379050.260.280.20.220.040.420.92630.09820.90871.94241933181209390167331134830186788195328216842980.260.210.260.2800.540.86310.32290.74221.94130176585119901761267076136666439548267852490.260.310.20.210.020.410.89250.20470.82721.92180132841138841362311071107620493400.280.250.240.2400.470.87180.25120.79221.9577019183219935311984612300447996388340.290.310.20.190.010.40.90280.13650.87991.94430831114019421425708050.180.240.260.3200.580.87210.28340.76031.95450000000000NANANANANANANANANANA043916102132928114291847944052248446145952050462532122451254737473166539138432418896921224262298181024245150624311508493037262528316614153840483336205222273156265349280439724553398520824154464825862463201030031177412447104388566296328771293313083728042004
GCF_000242695.1NC_023199NC_023199.1Lepisosteus oculatus isolate Spotted Gar 1 linkage group LG21; LepOcu1; whole genome shotgun sequence.4200033420140829764152970204795721151437810.280.280.20.20.050.390.95540.00120.99881.94861851853702796006302253220598012178280338467103950860.250.270.210.230.030.440.92910.08680.91861.95482843115816031813303210660615658716222385584560.250.20.260.2900.550.86020.32980.73791.93080210150423099241483729157102427174577379260.250.30.210.220.020.430.8960.19020.83831.9240251843128301319410559112420478250.260.250.230.2600.490.86980.26760.78161.94690964751008796543766889114213411010.270.310.20.20.020.40.89940.16130.86171.92310011121723300820.150.210.280.3700.650.86820.30450.73631.92150000000000NANANANANANANANANANA03379471410102252363164103482161535323783167833592677238421832866258541022977180570311936350923976470348611901751108242332932204825681043317139963012441221854808427824513022408433571489383436792148183117072772873361839683926481296328651165254263521831614
GCF_000242695.1NC_023200NC_023200.1Lepisosteus oculatus isolate Spotted Gar 1 linkage group LG22; LepOcu1; whole genome shotgun sequence.3118089308667524150692401350599600116207830.270.270.210.210.050.410.95220.00790.99211.9584190200390230508725426171846780196680729535789566480.250.270.210.230.030.440.93050.09580.91061.961422759161177338134618109986167906171844195843730.240.20.270.2900.560.86110.3190.74531.93610166746318808221286409137745225985164719970.250.30.210.220.020.430.89790.18880.83691.9331020193997448971798081250348200.270.240.240.2600.490.87360.28710.76621.952407018372657485714885456472459120.270.30.210.210.010.420.90070.17550.84851.949302245270759202890.180.240.260.3200.580.89850.24990.77971.96330000000000NANANANANANANANANANA035394771110721233914698439181480390340201374341826892253199829622489462033301689784818793876236567363711117216949774451325819982807857313940703403489621035263476828992656443335961588399936092218211819112899829377840714105458312628741245263558223361895
GCF_000242695.1NC_023201NC_023201.1Lepisosteus oculatus isolate Spotted Gar 1 linkage group LG23; LepOcu1; whole genome shotgun sequence.4987070497583733568813349819370229170398360.290.290.20.20.020.390.94970.00220.99781.96042312464773224836349664123017322440177147685116110710.270.290.210.220.020.420.92870.08930.91631.9662837198213411175397143798196103201126137164370.250.210.260.2800.540.86340.30960.75151.94320216111124074281514733161624212624178257550.260.310.20.210.010.410.89640.18020.84371.93940262854168381560412949130460584370.280.240.230.2500.480.86980.28210.77161.9466018661119280412674913048030056396490.290.310.20.200.40.90380.13050.88531.9550841215319823929308830.170.220.270.3300.60.88660.27470.76341.95170000000000NANANANANANANANANANA049196099143331344824808746382369461247152244469736822437294439143448566740652591897621824393321384124343163226441520485339042789331815244461513139605295271958535867265940734720435721704370471130252617193929131237473350045037650303028011298327580929211710
GCF_000242695.1NC_023202NC_023202.1Lepisosteus oculatus isolate Spotted Gar 1 linkage group LG24; LepOcu1; whole genome shotgun sequence.2005041197734217841841776331194920394921010.210.210.190.190.210.380.95240.00920.99091.851242226468119544212829441141730117739780718056046930.210.230.220.230.110.450.91830.10740.90211.881411588194187381111137941761642181630471235327010.220.190.290.300.590.85450.32890.73951.9154066118173313260105461917667275532872980.210.250.230.220.090.450.87730.27010.78421.8310293261162031586315333159080633070.250.230.250.2600.510.85620.29820.76361.9426077060821686607668804146153087230.250.290.220.220.020.440.89340.1930.83661.93760921115917621727108230.190.210.260.3300.590.87840.22180.81111.95760000000000NANANANANANANANANANA02893403877619063174614632308984150383294422522485256717732661236943423014106473041739350815526080376582112946633547284513602693591274541673009570720385833445230421525472836791110460529992074138320953452511365739893552352342534561053178942921321448
GCF_000242695.1NC_023203NC_023203.1Lepisosteus oculatus isolate Spotted Gar 1 linkage group LG25; LepOcu1; whole genome shotgun sequence.3970403396708528308382834832784685143878430.280.280.20.20.050.390.94840.00110.99891.94831791773562740561296262020269312141083419980102911750.260.270.210.220.050.420.92820.08720.91821.9414186341491482971182219764114372014659755061840.250.20.270.2900.560.86320.31550.74821.93790190892820922781378251145525633508671697990.250.290.210.220.030.420.89550.18750.8411.92350272653158401520813183134490576800.280.250.230.2500.480.87460.26550.78311.95830216682232151143003150166193867613880.280.310.190.20.010.390.90310.13860.87671.942402023139354001450.210.270.240.2800.520.90890.21120.82131.98450000000000NANANANANANANANANANA03125419597620613410571433801367338435441355289725202025203725982401387827631548658916253302209457313316105916668723830268718102419841299834622812412819604383416124362274360531741363331732432094168115022428747331236443582414242022271134220948521361478
GCF_000242695.1NC_023204NC_023204.1Lepisosteus oculatus isolate Spotted Gar 1 linkage group LG26; LepOcu1; whole genome shotgun sequence.36280243574292266420326458561260309137726840.260.260.190.190.090.390.95350.01090.98921.9277209228437250070426769721902896198324629751293613300.250.270.220.230.040.440.92540.09750.91011.952380152179331120650100982156287157062225350030.230.20.280.2900.570.86030.32160.74441.93120154315616837501159869121207524788758467370.240.280.220.220.040.440.88890.22160.81621.91470504494259792625122147224700968470.260.250.240.2500.490.87230.27420.77851.95380260226272012159548162282126488667160.270.320.190.20.030.390.88880.20860.82491.912401122734404301440.190.240.280.300.580.88380.19710.82341.97450000000000NANANANANANANANANANA03045386990823433521569233531211395041021252266930752286212524472745392227561437657617493707179256493650109217468033984253515902629807339235252999491619614726436824912072396433521272406237762301156117562827700378642053959534298428661122212859625691566
GCF_000242695.1NC_023205NC_023205.1Lepisosteus oculatus isolate Spotted Gar 1 linkage group LG27; LepOcu1; whole genome shotgun sequence.4422882443609628769652888205636371152605190.290.290.190.190.040.380.94780.00340.99661.94431691973663021548325964020029592126911348355107594130.270.290.190.20.040.40.92710.08670.91871.933531514517431915042712024914570415103235674150.270.220.240.2700.510.86510.31980.74531.94540187615520771881226230130923825014067389510.270.320.190.20.020.390.89320.1780.84631.91720231437192341848513457133060644820.30.250.220.2300.450.8770.26270.78431.959301380221413678396686556315914815020.290.310.180.190.020.370.90220.1310.88391.911901234052566802160.190.240.260.3100.570.88040.22790.80031.97050000000000NANANANANANANANANANA041195097133625773651587634922269342736202340445730851899247232282740413131652468642717203420285462283204158124701474395129282648241115853821379930123489217737964053168542643116317719222815413124842404142018821444330836613944669194118991065333196326541438
GCF_000242695.1NC_023206NC_023206.1Lepisosteus oculatus isolate Spotted Gar 1 linkage group LG28; LepOcu1; whole genome shotgun sequence.698884705687729419739348250691753802550.130.130.140.140.470.270.94260.01160.98851.55126910417329915832982137325438136574165721252550.160.180.220.220.230.440.90910.13440.88021.7516224551901413036026738520785172091609050.20.170.310.3200.630.84660.33610.73571.8969018498521291721794422275456792314065230.150.20.240.230.180.470.85110.3710.71961.677701372039623840413144990164320.240.210.270.2900.560.86240.28550.77021.9359012162130151179912431536921030990.180.220.20.230.170.430.88370.22080.81611.76430101142021270820.170.240.260.3300.590.89870.30150.73891.96290000000000NANANANANANANANANANA07901292198436788208792320812641131178519653827420785608140210482892584552114642715961112217219136108399336387513259013749742009657208912731230351178210482751635710485297654120010710191117940621291117033339869469500
GCF_000242695.1NC_023207NC_023207.1Lepisosteus oculatus isolate Spotted Gar 1 linkage group LG29; LepOcu1; whole genome shotgun sequence.342913535829863287301655192937610.120.120.10.10.560.20.93110.03470.96591.3927437702971926838725236759650700.170.180.170.180.310.350.89120.18920.83081.576402351495116013841496055350.250.20.270.2800.550.87450.24320.80241.92810198819771440166810506175790.170.230.20.20.20.40.8560.43810.65551.64280000000000NANANANANANANANANANA0000000NANANANANANANANANANA0000000000NANANANANANANANANANA0000000000NANANANANANANANANANA0332815243558182129461425472130342453375705231778441111750381543136532205331235073716362637703316813294549141113124918383
NANC_004744NC_004744.1Lepisosteus oculatus mitochondrion; complete genome.50584345443524902163300.310.270.270.1500.420.93150.35670.71021.95642893746934320414225522157090.290.280.230.200.430.88270.3520.72561.943621617171518171637936061050.270.30.270.1600.430.87820.52050.62931.909910000000NANANANANANANANANANA0000000000NANANANANANANANANANA0000000NANANANANANANANANANA014822442436319369015660.280.280.20.2400.440.87730.28290.76751.95392202907566647524226460.340.210.250.200.450.91450.33410.71881.9658022651295583596277224246613481913548417216914464111193362546018746725273927741833921736261819210672315004664554927