GBRAP

Genome-Based Retrieval and Analysis Parser


Fish : Protopterus_annectens
Assembly Assembly Locus_ID Locus_ID Version Version Definition Sequence description bp_chromo_A Total number of 'A' nucleotides in the whole sequence bp_chromo_T Total number of 'T' nucleotides in the whole sequence bp_chromo_C Total number of 'C' nucleotides in the whole sequence bp_chromo_G Total number of 'G' nucleotides in the whole sequence bp_chromo_N Total number of 'N' nucleotides in the whole sequence bp_chromo_tot Total number of nucleotides in the whole sequence fr_chromo_A Frequency of 'A' nucleotides in the whole sequence fr_chromo_T Frequency of 'T' nucleotides in the whole sequence fr_chromo_C Frequency of 'C' nucleotides in the whole sequence fr_chromo_G Frequency of 'G' nucleotides in the whole sequence fr_chromo_N Frequency of 'N' nucleotides in the whole sequence GC_chromo Percentage of ā€˜G’ + ā€˜C’ nucleotides in the whole sequence topo_entropy_chromo Topological entropy of the whole sequence chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee shannon_chromo Shannon entropy of the whole sequence n_gene_pos Number of genes in the positive strand n_gene_neg Number of genes in the negative strand n_gene_tot Total number of genes in the chromosome bp_gene_A Number of 'A' bases in total genes bp_gene_T Number of 'T' bases in total genes bp_gene_C Number of 'C' bases in total genes bp_gene_G Number of 'G' bases in total genes bp_gene_N Number of 'N' bases in total genes bp_gene_tot Total number of bases in total genes fr_gene_A Frequency of 'A' bases among total gene bases fr_gene_T Frequency of 'T' bases among total gene bases fr_gene_C Frequency of 'C' bases among total gene bases fr_gene_G Frequency of 'G' bases among total gene bases fr_gene_N Frequency of 'N' bases among total gene bases GC_gene Percentage of 'G' and 'C' bases in total genes topo_entropy_gene Topological entropy calculated from total gene sequences chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes shannon_gene Shannon entropy score for total genes bp_gene_overlap_tot Number of bases overlapping between genes on two strands n_cds_pos Number of CDS in the positive strand n_cds_neg Number of CDS in the negative strand n_cds_tot Total number of CDS in the chromosome bp_cds_A Number of 'A' bases in total CDS (coding sequences) bp_cds_T Number of 'T' bases in total CDS bp_cds_C Number of 'C' bases in total CDS bp_cds_G Number of 'G' bases in total CDS bp_cds_N Number of 'N' bases in total CDS bp_cds_tot Total bases in total CDS fr_cds_A Frequency of 'A' bases among total CDS bases fr_cds_T Frequency of 'T' bases among total CDS bases fr_cds_C Frequency of 'C' bases among total CDS bases fr_cds_G Frequency of 'G' bases among total CDS bases fr_cds_N Frequency of 'N' bases among total CDS bases GC_cds Percentage of 'G' and 'C' bases in total CDS topo_entropy_cds Topological entropy calculated from total CDS sequences chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS shannon_cds Shannon entropy score for total CDS bp_cds_overlap_tot Number of bases overlapping between CDS on two strands bp_cds_intron_A Number of 'A' bases in total introns between CDS bp_cds_intron_T Number of 'T' bases in total introns between CDS bp_cds_intron_C Number of 'C' bases in total introns between CDS bp_cds_intron_G Number of 'G' bases in total introns between CDS bp_cds_intron_N Number of 'N' bases in total introns between CDS bp_cds_intron_tot Total bases in total introns between CDS fr_cds_intron_A Frequency of 'A' bases in total introns between CDS fr_cds_intron_T Frequency of 'T' bases in total introns between CDS fr_cds_intron_C Frequency of 'C' bases in total introns between CDS fr_cds_intron_G Frequency of 'G' bases in total introns between CDS fr_cds_intron_N Frequency of 'N' bases in total introns between CDS GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS shannon_cds_intron Shannon entropy score for total introns between CDS bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands n_ncRNA_pos Number of ncRNA in the positive strand n_ncRNA_neg Number of ncRNA in the negative strand n_ncRNA_tot Total number of ncRNA in the chromosome bp_ncRNA_A Number of 'A' bases in total ncRNA bp_ncRNA_T bp_ncRNA_T bp_ncRNA_C Number of 'C' bases in total ncRNA bp_ncRNA_G Number of 'G' bases in total ncRNA bp_ncRNA_N Number of 'N' bases in total ncRNA bp_ncRNA_tot Total bases in total ncRNA fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA shannon_ncRNA Shannon entropy score for total ncRNA bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands bp_nc_intron_A Number of 'A' bases in total introns between ncRNA bp_nc_intron_T Number of 'T' bases in total introns between ncRNA bp_nc_intron_C Number of 'C' bases in total introns between ncRNA bp_nc_intron_G Number of 'G' bases in total introns between ncRNA bp_nc_intron_N Number of 'N' bases in total introns between ncRNA bp_nc_intron_tot Total bases in total introns between ncRNA fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA shannon_nc_intron Shannon entropy score for total introns between ncRNA bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands n_tRNA_pos Number of tRNA in the positive strand n_tRNA_neg Number of tRNA in the negative strand n_tRNA_tot Total number of tRNA in the chromosome bp_tRNA_A Number of 'A' bases in total tRNA bp_tRNA_T Number of 'T' bases in total tRNA bp_tRNA_C Number of 'C' bases in total tRNA bp_tRNA_G Number of 'G' bases in total tRNA bp_tRNA_N Number of 'N' bases in total tRNA bp_tRNA_tot Total bases in total tRNA fr_tRNA_A Frequency of 'A' bases among total tRNA bases fr_tRNA_T Frequency of 'T' bases among total tRNA bases fr_tRNA_C Frequency of 'C' bases among total tRNA bases fr_tRNA_G Frequency of 'G' bases among total tRNA bases fr_tRNA_N Frequency of 'N' bases among total tRNA bases GC_tRNA Percentage of 'G' and 'C' bases in total tRNA topo_entropy_tRNA Topological entropy calculated from total tRNA sequences chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA shannon_tRNA Shannon entropy score for total tRNA bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands n_rRNA_pos Number of rRNA in the positive strand n_rRNA_neg Number of rRNA in the negative strand n_rRNA_tot Total number of rRNA in the chromosome bp_rRNA_A Number of 'A' bases in total rRNA bp_rRNA_T Number of 'T' bases in total rRNA bp_rRNA_C Number of 'C' bases in total rRNA bp_rRNA_G Number of 'G' bases in total rRNA bp_rRNA_N Number of 'N' bases in total rRNA bp_rRNA_tot Total bases in total rRNA fr_rRNA_A Frequency of 'A' bases among total rRNA bases fr_rRNA_T Frequency of 'T' bases among total rRNA bases fr_rRNA_C Frequency of 'C' bases among total rRNA bases fr_rRNA_G Frequency of 'G' bases among total rRNA bases fr_rRNA_N Frequency of 'N' bases among total rRNA bases GC_rRNA Percentage of 'G' and 'C' bases in total rRNA topo_entropy_rRNA Topological entropy calculated from total rRNA sequences chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA shannon_rRNA Shannon entropy score for total rRNA bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands ATG ATG AAG AAG GTA GTA ACT ACT GCA GCA GAG GAG GCT GCT ATT ATT TCC TCC TGG TGG AAT AAT GAA GAA TCA TCA ACG ACG AGT AGT AAC AAC TCT TCT GTG GTG TTC TTC TTT TTT CTG CTG GGT GGT CTC CTC GAT GAT CAG CAG ACC ACC CTA CTA TTG TTG TAT TAT GGA GGA ATC ATC CTT CTT GTC GTC ATA ATA ACA ACA GAC GAC CAC CAC CCC CCC TAC TAC GCC GCC AGC AGC CGC CGC AAA AAA GGC GGC TGC TGC GTT GTT GGG GGG AGA AGA TGT TGT CAT CAT TCG TCG GCG GCG TTA TTA CCT CCT AGG AGG CCA CCA TAG TAG CGG CGG CCG CCG CGT CGT CAA CAA TAA TAA TGA TGA CGA CGA
GCF_019279795.1NC_056725NC_056725.1Protopterus annectens isolate FY-2018-M chromosome 1.part0; PAN1.0; whole genome shotgun sequence.5854758055843413113932902773934131864347942120000000000.290.290.20.20.020.390.94120.00110.99891.96036086221230210838203219906767151963404146299029168566207458640230.280.290.20.210.010.420.92520.09030.91821.96190443452895474871399854309864349007015335960.310.260.20.2300.430.86810.30640.7531.94780177238248185105098128102785123146253142931146278854980.290.310.20.20.010.40.92660.09410.91411.95305973132299322938417574198170967070.30.290.190.2200.420.8650.30580.76041.930603327074338679422158452183336197131113101800.280.330.190.190.010.380.90970.18490.84641.9360837415724452913269335400115910.210.250.230.3100.540.88220.23410.79671.97640691558655359557970240238270.240.240.230.2900.520.8890.14590.86651.9911013698144746892937110862108868803108456026873511096169469908197693889153936590128108116621253655635666111711527557796034101897468973072469819547774561220676976410377462914929804015331789746297243855642181200881768870186214287795774870089656296018251512238410709450776102596
GCF_019279795.1NC_056726NC_056726.1Protopterus annectens isolate FY-2018-M chromosome 1.part1; PAN1.0; whole genome shotgun sequence.5796714765801575023933841683931661615362069320000000000.290.290.20.20.030.390.94010.00070.99931.95866406391279194954286201660720141002278135769573165518366899386930.280.290.20.210.010.410.92310.09480.91641.9596285485469466935463468392093298821335688014900700.310.260.20.2300.430.86720.31970.74531.94270163541211169166812118578572113970351130716985783286440.290.30.20.20.010.40.92690.09260.91551.9557085901754401041799275512829101416510.310.270.20.2100.420.86070.36290.72241.913303464640353817823772082379626188496119481480.280.310.20.20.010.390.90230.22620.81661.9377062601221853231121032766090330.210.250.230.3100.540.87350.26290.77491.973708122062375601651879750263310.240.240.240.2900.530.88360.13230.8781.9901013835137576936877610447100998071101825864862110853154899812187287518883859694588436111291245152115463102501456056346015103137451946275029152523582041241970886582364662894554762412651661242696931824542511185479839063177713398006706964829211351416041445209610914546179582222
GCF_019279795.1NC_056727NC_056727.1Protopterus annectens isolate FY-2018-M chromosome 1.part2; PAN1.0; whole genome shotgun sequence.3670560593669723752475372982476740033118892112604286560.290.290.20.20.020.390.94080.00040.99961.9594133217341260169021315702589159954587965531100461944471984300.280.290.210.210.010.410.92680.08420.92411.961378604925324549827282922244817406019861708679540.310.260.20.2300.430.86640.32150.7441.94380107449723112293843785722657519808582223413817362570.280.310.20.20.010.40.92690.09570.91311.953809839137253012687715805172270852100.30.320.180.2100.390.87040.31940.75181.908603132522324293520886892090963185665107407740.30.320.190.190.010.380.91940.12220.89271.9334040185890510989911276042700.210.260.230.300.530.88050.23720.79681.97590991871196440701287030292740.240.240.240.2800.520.88510.15670.8591.989607833872738865094632263155181569032934847627810085562211075325516352525112452562477005311931216348841032553442575840565630412254202889418170124318382121613513283246517901034426914039476922757226443651829628214456417940075249181896187912396247262043401383
GCF_019279795.1NC_056728NC_056728.1Protopterus annectens isolate FY-2018-M chromosome 2.part0; PAN1.0; whole genome shotgun sequence.5848287665838166873919664633927596214662846320000000000.290.290.20.20.020.390.94120.00190.99811.95924915441035210824222219259491150920722145544809162244277427736710.280.290.20.20.020.40.93070.07190.93381.95941081132385425810447020376250295400332703014513730.310.260.20.2300.430.86790.30830.75241.94770174541591181685611125310423120631783128291126149985200.290.310.20.20.010.40.92640.09230.91571.954905570125224442149614056140520720480.310.280.20.2100.410.86620.31460.75151.923304314905443338629245012914385230215148173920.290.310.190.190.010.380.92050.11730.89611.945902327507419558651106036670.20.260.240.300.540.88360.2780.76361.971401121348864486465459020199280.250.240.240.2800.510.88890.110.89841.99470139061375964008558104589684824699095702854210306150569118195586768691808291607807102191244352535609100861425756625692100316989937072028888521773411177371186369362160154978757714411588045766745775940321154078288664176913007288730767449297333616691465218810181466376632392
GCF_019279795.1NC_056729NC_056729.1Protopterus annectens isolate FY-2018-M chromosome 2.part1; PAN1.0; whole genome shotgun sequence.5827075725826623923944993693946926554543801220000000000.290.290.20.20.020.390.94060.00030.99971.96076766311307215632907223782767155459766150171435157759297608228040.270.290.210.220.010.430.91940.10790.90391.961595402440842472592399186304712340500015169900.310.260.20.2300.430.86790.30720.75311.9470183649443190559933132615971127932093127055376474629770.290.310.20.20.010.40.92710.08970.91791.9570111661773169432113199142035901040800.30.290.190.2200.410.86720.33740.74021.905904109145425098128667262816885481930145256670.280.320.190.190.010.390.91130.15980.86351.9421014110324434804669430654510179060.190.260.240.300.540.88040.27350.76431.9703012102263565751640579570264690.240.230.240.2800.530.88840.12030.88891.991101402814108673590671068798488665106175878855511456166449859188188708922875190158479114841247354215756107661475756596141101597638940874849642526578131239673026466359464474795760813811755044687022811543561196085789275175213328462731967499377322616861595225611104506776832467
GCF_019279795.1NC_056730NC_056730.1Protopterus annectens isolate FY-2018-M chromosome 2.part2; PAN1.0; whole genome shotgun sequence.3347240883356291382259787382254530303450306811562880620.290.290.20.190.030.390.94050.00250.99751.95593442966401171802651219848708463503181252588106540524157068060.280.290.20.210.010.420.92490.09630.91381.96111726823419643022693818994414532616287407250820.310.260.20.2300.430.86790.30540.75371.9457099515117103583747718939246897165485988213525632630.290.310.20.20.010.390.92690.09070.91741.95210563490212282069812630133350678910.310.270.20.2100.410.87290.29010.77061.93020241536125127681639336162394231289685043030.290.320.190.190.010.370.91550.11660.89461.940603559941418186416112077069700.20.270.230.300.530.88120.27430.76771.971501131457155164567971150236730.240.240.230.2900.530.89380.16420.85151.98950631969463226419349954965389550902879404751437770477095442354449427541134092550857602470267050106928287328894993376046783607452225253850596633823159169030632378382864084672136353238631920609240794247871648383535303318443917418067009975088250140111163
GCF_019279795.1NC_056731NC_056731.1Protopterus annectens isolate FY-2018-M chromosome 3.part0; PAN1.0; whole genome shotgun sequence.5855283595857141593919039833918393234501417620000000000.290.290.20.20.020.390.94140.00020.99981.95925995771176219113032227863580156020945150532334177118627712417530.280.290.20.210.010.410.92560.08760.92111.96060436421857477366401744305783342248015271410.310.260.20.2300.430.86730.31290.74921.9440192378113200235188137564027132439202151248756777414050.290.310.20.190.010.390.92630.09250.91571.950409291183264802628817993193980901590.290.270.210.2300.440.86640.32540.75031.904405416359553772635544093523955251353182838020.280.320.190.200.390.91420.14860.8741.945604847951472179615772154069990.210.260.230.3100.530.88080.27190.76911.97330101525129391163712911160370535240.240.230.240.2900.520.89120.13780.87371.989014178146926830930510926100238640109875868861911283161739754199489349163874392248646117551266353905699103191449759036117103727818967775709698515485101263373656679354365404766789413411796446327108825740421220981709147179413808205727669079261346416731468213310759487876492440
GCF_019279795.1NC_056732NC_056732.1Protopterus annectens isolate FY-2018-M chromosome 3.part1; PAN1.0; whole genome shotgun sequence.5566831305564466033752108033753361965301445819166911900.290.290.20.20.030.390.9410.00040.99961.95736176751292211422396219555833151315134146397268149056267435962570.290.290.20.210.010.410.92380.08970.92031.9577366301473525998579653463698355394402821018015660.320.260.190.2300.430.86640.32120.74541.94134182462900189537840130944850126443550129143166423034560.290.310.20.20.010.390.92560.0930.91531.95463184477811583726036522221452419501201220.310.280.190.2200.410.85270.38270.71151.894804240465436997329216452867531321976147215900.290.310.190.20.010.390.90710.17180.85761.939104342851292155014421917062010.210.250.230.3100.540.87750.25550.78171.97160917261022792679983122840417610.240.240.240.2800.520.88330.14040.87191.9917016650166529376986113072114658983115236959974914616181331055620981089711627900713014942612377143616319602511792168246620721711384877610442991610355642612256178418785840042947516532192601567220785772820810209460917288100771185118551456103328213834210837372018841559246412046619487782583
GCF_019279795.1NC_056733NC_056733.1Protopterus annectens isolate FY-2018-M chromosome 4.part0; PAN1.0; whole genome shotgun sequence.5817274735813081353943693873938781234871688220000000000.290.290.20.20.020.390.94110.0010.9991.95997406131353226495133236524087165480016158819446194913168068099980.280.290.20.210.010.410.92650.08010.92681.9622532045854841069536707450931357711398351017437000.310.260.20.2400.440.8680.31530.74761.94730195676043204573936143524705137484613162526356975119320.290.310.20.20.010.40.92560.09960.90961.952507463137308003041217540212130999650.30.280.190.2300.410.86180.33930.73521.901703943874402286626746512635957339868136172160.290.310.190.20.010.390.91280.18250.85161.942504644901458171815482023067470.220.250.230.300.530.86030.27080.76851.9727014102451704704507863100212620.240.240.240.2800.520.88440.12240.88691.9930151041597879351023612321127411010412361724895311326519476109012437102321049110374105409321129751459065806771131671724369396770113318705110158709107266352868013990931576224637736159039135176119404542478369580516113189878797392367174286828648785811162328822251921277212016470481302977
GCF_019279795.1NC_056734NC_056734.1Protopterus annectens isolate FY-2018-M chromosome 4.part1; PAN1.0; whole genome shotgun sequence.2974660222972706771984447201984170072598746010175858860.290.290.20.190.030.390.94160.00040.99961.95713373246611076248251118338287682086473911650102621563804533230.290.30.20.20.010.40.92860.07230.93371.958028025253228646924457718939220266209231000.310.260.20.2300.430.86720.3160.74781.943509013514593693039646358766200229581423813186087360.290.310.20.190.010.390.92320.09970.90921.947303448821521615484965497430500970.30.290.210.200.40.86490.32240.73791.90530208584521547671413887139529340963174594230.280.320.20.190.010.380.91160.17160.85391.93620111324381469411529017900.220.260.230.300.530.87610.26430.77611.975404481243118311071405049380.240.240.240.2700.520.87340.10540.90221.993908589815844465413649758625000643932805156658492346092114150175046515057514998719083903188365060459668347244946464490155934430579131705145795844224238214038452827426476998942650419449602358650847316302103977554264562375461502094107888113038468325944791576
GCF_019279795.1NC_056735NC_056735.1Protopterus annectens isolate FY-2018-M chromosome 5.part0; PAN1.0; whole genome shotgun sequence.5866202505859413673906565813913257314545607120000000000.290.290.20.20.020.390.94110.00140.99861.95866326221254222875451231841894159143660153177073173456897843837670.280.30.20.20.010.40.92570.08240.92541.95740484487971540811461329344317375722017221790.320.260.20.2300.420.86730.31070.75041.9430190313790198102957136399198130991661145617016703693070.290.310.20.190.010.390.92570.09410.91441.95180103901934231643390267262774501401770.30.290.20.2100.410.86880.29930.76081.922306699773686941644543844403975383142228106900.290.320.20.190.010.390.91710.14410.87741.94440372360878113010661297043710.20.260.240.300.540.88030.24120.79321.974602101234453152336941340141000.240.240.240.2800.520.89110.09260.91391.99190163931593878931058612423104369477130066246945612646184441201021481013410157105861010394831399214453580461691139316401630276871186490401011586171149259759747147427716741339797329520685041352204355005768197894253134459067100571851139198008245734110639386316611629234013299580984282588
GCF_019279795.1NC_056736NC_056736.1Protopterus annectens isolate FY-2018-M chromosome 5.part1; PAN1.0; whole genome shotgun sequence.238021221237650567159306394159431642191143508135241740.290.290.20.20.020.390.9410.00120.99881.95882602334937606466779146853551449295293388271683902704587210.280.290.20.210.010.410.92250.09480.91531.956476860219818438219819517112613094414303706433020.310.260.20.2300.430.86810.30.75741.947606470019767344986470763524509979653801232296014540.290.310.20.20.010.40.92530.09640.91251.9529036134986488029539658460279190.310.270.20.2200.420.86760.3410.73251.91950209182121493681407234137799833098673574070.280.320.190.190.010.380.91420.16230.86291.937101831497839258391074036210.220.260.230.300.530.87840.23280.79941.9748013426962439278335150114330.240.220.240.300.540.89310.17180.84391.98650562861332985393945554341354848412517356146386701408582938713769383538283601511353922169246744846190246127394423334337433144418522563467524931932776168028222114330260570571916297536731684490734033823746550358631892831414914027276469524515199031211084
GCF_019279795.1NC_056737NC_056737.1Protopterus annectens isolate FY-2018-M chromosome 6.part0; PAN1.0; whole genome shotgun sequence.5844520805840946943927016113931025304564908520000000000.290.290.20.20.020.390.94150.00080.99921.95976366241260247990623258574119179036582171914944185532598760695270.280.290.20.210.010.410.92690.08420.9241.9591548493492486978595436490985379731431675018978270.310.260.20.2300.430.86660.31360.74841.9453538211119535220267773152779287146445853147116247453240720.290.310.20.190.010.390.92360.10140.90851.949306175136298532944618220191030966220.30.280.20.2100.410.86910.31960.75491.91660288838029445181943384190603817211498544340.290.310.190.200.390.90220.18220.85091.936603235671025128111751540050210.210.250.230.3100.540.87820.26220.77441.972202893710975987212787157900494240.220.210.260.3100.570.88870.12770.8821.9769017173190328415107341355913285109661266973121034814220211571234724831145011308109401140610182139361589271477038139221851668277655131839393121478971118326505959415169921882954539794361449563177222628596683631003151361512196131116522111715100379319885211646421721991910276013961632792813118
GCF_019279795.1NC_056738NC_056738.1Protopterus annectens isolate FY-2018-M chromosome 6.part1; PAN1.0; whole genome shotgun sequence.168627254168980809113319836113606818150875035796222200.290.290.20.20.030.390.94220.00230.99771.95782212354567820614681577500561101325391452170484992768567980.280.290.20.210.010.410.92840.07780.92921.960711062117217334518386115177411740513380805868480.310.260.20.2400.430.86620.32610.74111.942806546628268396868470829714513303659038112319829680.290.310.20.190.010.390.9240.09970.90951.94803224561422415046869897970477650.290.30.190.2200.410.86730.2770.77531.9413026048552622335173015917127547547387455760.290.310.190.200.40.91190.15260.87341.9498051015215300254338011070.20.270.230.300.530.87880.33790.71951.96360324271540151517372106068980.20.220.270.3100.580.88550.11570.89141.9743050145647254035074152414733854144224234264331673636927233498339633883451320144084628229121274247558822352279371430754049286235762025279547942952254413642606193430065266851185027573133155648603117352572753627842809256636921269610551883426019253175952
GCF_019279795.1NC_056739NC_056739.1Protopterus annectens isolate FY-2018-M chromosome 7.part0; PAN1.0; whole genome shotgun sequence.5830406385839528463929851473925789034744246620000000000.290.290.20.20.020.390.94150.00130.99871.95937587651523239661328249578068172125144166094633172438368447030090.280.30.20.210.010.410.92730.07920.92791.96111694025965901186626096533971417494458983020365440.310.260.20.2300.430.86930.30630.75361.94810199661992208071544143903618138503284132333657033738030.290.310.20.20.010.390.9250.09970.90941.9533072841564341043233264282774401408150.30.280.20.2200.420.8630.30820.7531.918206561199676740844214264402297411508225638380.290.310.190.20.010.390.9170.13690.88451.9478057591161901220219922566086610.220.250.230.300.530.8730.240.79431.975906101677526950730990860310970.240.240.240.2800.520.89420.15320.86031.9921018305185569026122231456213760116231443282061182114762214051325726771197112155116941235611489156011719471677760137821994978538347138691049212952103931264573691014117009100739156511689826707102521981223386397931711216586514940109381203024931867104289843897713420432324711963292915072635899193497
GCF_019279795.1NC_056740NC_056740.1Protopterus annectens isolate FY-2018-M chromosome 7.part1; PAN1.0; whole genome shotgun sequence.158001175158139144107385450107217518135089755442522620.290.290.20.20.020.390.94160.00120.99881.95981741963707054652173211237509611114910403740908112479137170.280.290.210.210.010.420.92160.09580.91661.963401221342561523321225329790510946904822380.310.250.20.2400.430.86620.31970.74491.945806128125363668738444091234265702131826802151988150.290.310.20.20.010.40.92680.09580.91311.956101921401137211227665076680369170.30.270.210.2100.430.85050.36460.71591.91250116586812075218143977918132738040069790.280.320.20.200.390.91420.17530.85121.949802334571007110210451304044580.230.240.240.300.530.85740.28370.75971.970803362404217423122825097150.240.230.250.2900.540.89810.11740.89091.991504494470421482900340534652663329718332613375453072946635292032562611298424673309392416621871367347471912189530062368298024572985180424454178260120911117197816872543471567815532079257212683959246327855434372421231921233038905560517765341713212314831
GCF_019279795.1NC_056741NC_056741.1Protopterus annectens isolate FY-2018-M chromosome 8.part0; PAN1.0; whole genome shotgun sequence.5794654595803181923923330443921415445574176120000000000.290.290.20.20.030.390.94090.0010.9991.95769198961815252204021261420111181198252174377282228283208920279860.280.30.20.20.010.40.92640.07960.92821.954120307197091428652796561916438644483491021368470.310.260.20.2300.430.86680.31050.75211.94530207552183215402150149528695143659010184437117345857490.290.310.20.20.010.390.92410.10060.90891.951601151012165168649604307773249501645620.310.290.190.2100.40.85950.32040.74961.913605512806564894138183813750505293224190238570.30.310.190.190.010.380.91320.12880.88961.9444059521111601210519862445081370.20.260.240.300.540.88080.26330.77531.970509615857578088610108940358870.240.230.240.2900.540.89690.14540.86671.98790203251990793341296115136143881177414575883312621150192126514785270812016126241253813811124581561518495745984991377821376865087571518810734134731073513047788210826179349967971954139267714910763190422221631199951114161551610311690126652485185511235103049891134744632246620103065154916979116343364
GCF_019279795.1NC_056742NC_056742.1Protopterus annectens isolate FY-2018-M chromosome 8.part1; PAN1.0; whole genome shotgun sequence.161938405161421728106671607106949389123891215493702500.290.290.190.190.020.390.94250.00290.99711.95741712073785653498859189611404597703902632156127092008233990.280.30.20.20.020.40.92690.08460.92371.956012417229615420013117610367211371305027610.310.260.20.2300.430.86880.30230.75621.949304941857351768803355180743419827246524801755562020.290.310.20.20.010.390.92610.09720.91121.94910292655165841663610391109030545140.310.290.190.2200.40.87070.33180.75191.8881019500442012086132675612832044126266133520.290.320.190.200.390.91370.15650.86921.9458011617259337286358012400.210.270.230.2900.520.87540.29780.75181.970302241879166518802376078000.230.240.240.2900.530.90920.15520.85831.9912048064744232529913646331528263587203327113516524531227063004298129453125276838304368172619693402493919521941328023412994254432301794262040662572230313272131178927634835567149223612830139939082656301568651225972490235131141000614591747356314192321823
GCF_019279795.1NC_056743NC_056743.1Protopterus annectens isolate FY-2018-M chromosome 9.part0; PAN1.0; whole genome shotgun sequence.5731292145740086723870538463862191925370311119741140350.290.290.20.20.030.390.94250.00180.99821.957510149431957253858129263922626183474173176359899205414948981563210.280.290.20.210.010.410.92420.09360.91691.95917700387107081418649825550456446317496622021432200.30.260.20.2400.440.86720.31730.74631.94780208840323217416770151965739145470258167742277404673170.290.310.20.20.010.390.92380.10440.90561.953301701292995573853616338803629201795260.310.280.190.2200.410.8630.33830.73931.914208194010840961755701995535878728257284379610.290.310.190.20.010.390.91080.15950.86811.93420976215924882657287835720115950.210.230.250.3100.560.88240.25660.7791.9698010142473876737721589410302800.240.240.240.2800.520.88760.12450.88541.991602058420547913712532156281591012308147098853122411437322250133963027120481257112558139831195714957190998222842214547215089088851714384101631378711244129708007101491759910738931658418792790210900220922308691096001127264151617311220122342537224410055111239901140554120280523033467148576029105353843
GCF_019279795.1NC_056744NC_056744.1Protopterus annectens isolate FY-2018-M chromosome 10.part0; PAN1.0; whole genome shotgun sequence.5356282405356495333600631723600144275085634918422117210.290.290.20.20.030.390.94160.00010.99991.95698518551706219035868227506450155802398151008242137846937671376510.290.290.20.210.010.410.9240.08630.92231.960410441836436601303688790554996439737491302021748250.310.250.20.2300.430.8670.31660.74621.94470185633065193293332132838237128358649105930526507163350.290.310.20.190.010.390.9210.10960.90181.951201021222244360242746273072914301427980.310.280.20.2200.410.86470.31920.75381.922904976292503823632775923287973231067168111600.290.320.190.190.010.390.9080.170.85691.938068341021444185218632347075060.190.250.250.3100.560.87750.25180.78181.9688015142970096358705787270291510.230.230.250.2900.540.88280.10560.90241.98880197022092911561128241559715682113291442280121097117577236391410127881353113293113111423112518145431914276398427141642150588618480136151000512892116481242077641268719384106471053454598795702911750191025393620298231187861051769611754137442484199910865989810234130684343250821133001150746565106113223
GCF_019279795.1NC_056745NC_056745.1Protopterus annectens isolate FY-2018-M chromosome 11.part0; PAN1.0; whole genome shotgun sequence.4605453064598360953074038793078565643421795715698598010.290.290.20.20.020.390.94170.00150.99851.95955515431094216157926224831204153112974148234677168407147591774950.290.30.20.20.010.40.92870.07890.92911.95911594182452424876510040417365319676358312016053930.320.260.20.2300.420.86550.32230.74381.94090186400123194109550132402492127970376132792086541617490.290.310.20.190.010.390.92360.09710.91171.9509062681304424543724263562698101413060.310.280.190.2100.40.86380.31450.75371.912203962272407824826350122634413229495135394400.290.320.190.1900.380.91030.17010.85861.9417026305678810909741315041670.190.260.230.3200.550.88130.32150.73041.964026828082641271834870116540.230.240.240.2900.530.89730.14670.86551.9893014964155677130933911155105378569110246030875812161176521032121819112966589369935854711885128905379613711111150786006676510675810610021758398195552907613771771271893856674850108036139719761461174458815425613754899510170178413478815754872199729328317621531225212039533680402573
GCF_019279795.1NC_056746NC_056746.1Protopterus annectens isolate FY-2018-M chromosome 12.part0; PAN1.0; whole genome shotgun sequence.4605617974605964653103680833104403843588267915778494080.290.290.20.20.020.390.94150.00020.99981.965595951154192856983200711929139061555133930964153280236818894540.280.30.20.20.010.410.92920.07650.93051.960244825433468901471767396181317483346888015323190.310.260.20.2300.430.86880.30050.75731.94950160513046167269053115877527111471475115627235666938240.290.310.20.20.010.390.92450.09940.90951.954737779966661324001838842236122668101291530.310.290.190.2200.410.85770.3620.72551.90350336635234249452238336221377171643113150470.30.310.190.200.40.9070.17840.85251.94950273562879115111791453046620.190.250.250.3100.560.87780.25680.78081.965105272030184519022433082100.240.240.230.2900.520.89120.15250.86111.99230136121470165088912105351042985931020363938965106761607299042082891594698905910286281118812835547062001045114721603161181017273299800771196915728751312558781168924251671852368045147116906471871638057412112104802488942021143475067740700710132329018701630228110902494081922704
GCF_019279795.1NC_056747NC_056747.1Protopterus annectens isolate FY-2018-M chromosome 13.part0; PAN1.0; whole genome shotgun sequence.3963685043962359212696395462699860553949730913717273350.290.290.20.20.030.390.94220.00080.99921.95796736591332194961150203659096143100591136800465176156276961369290.290.290.20.210.010.410.92470.09950.91341.9566844725325271059530511435072361596397748017249270.310.250.20.2400.440.86730.31680.74661.94750169030951176705588124644304118781573151020936042645090.290.310.20.20.010.40.92360.10710.9031.9524076661423373034335199242245101104400.310.290.180.2200.40.86240.33980.73821.9021026685562763269180311317793834755490618750.30.320.190.200.390.90740.18090.85111.941504338811248153113711787059370.210.260.230.300.530.87790.25510.78111.9770391237583430389549920160750.240.240.240.2900.520.88320.13180.87921.98940151761564073821012712637126401004110954724398361146318243108792401106021037698801057492561160014858655868321162317556729571671072079111119583301067562657901146858534806746977295596996661759187295399801289105161135418892100642192179275958487788811082365322871932279313455529292593172
GCF_019279795.1NC_056748NC_056748.1Protopterus annectens isolate FY-2018-M chromosome 14.part0; PAN1.0; whole genome shotgun sequence.3446009923445636932287034692287700162595268011725908500.290.290.20.20.020.390.94220.00020.99981.9583425402827159243535165921665113455952109596563134726415616903560.280.290.20.20.020.40.92850.07220.93411.9559569342310652367054297290236046264468711648650.320.250.20.2300.430.8680.32340.74211.943701336768251394002249564573592204897108749754718026560.290.310.20.190.010.390.9230.10050.90891.94740394786239162300814064150970760850.310.280.20.2100.410.86850.280.76931.9338027906202827274184968418483679622894121730.30.310.190.200.390.91240.13250.88861.94510332457889108310321307043110.210.250.240.300.540.88320.22890.79921.9743034728512593274834710116630.240.240.240.2900.530.89010.13750.87371.98960102031192350506882829482916837804845146366848113451722215406794714665626779626182759574400144188339114034398464076135594727657447414412457999370580051212931480740196101109414107353554496126315995315910657214011063566356485326744025271386119417908449373759381958
GCF_019279795.1NC_056749NC_056749.1Protopterus annectens isolate FY-2018-M chromosome 15.part0; PAN1.0; whole genome shotgun sequence.252890296253528961166784583166342388237962728633425000.290.290.190.190.030.390.94180.00260.99741.9542832975809123816094485085648008846247368690219573220197720.280.290.20.210.020.410.92280.10590.90781.952618611420221441621040717544613932015535906805320.310.260.20.2300.430.86670.31820.74641.944707575857878447242542592605207904872211832677653110.290.310.20.20.010.390.92340.10340.90751.94810524597237342301313316154440755070.320.280.180.2200.40.86210.36140.72391.918403573694370561523282992300800458367123667750.30.30.180.20.010.390.89870.23970.81461.929102027476688978191091034750.190.260.240.3100.550.88510.30640.73891.967202462392221822712847097280.240.240.230.2900.510.89110.14970.8651.988706189623534383762491345663809459827103627487970294329963393640573884455936974894580226062661473468062604262446193242451932944050240536735947342130481797310922053461641760521333072347819725386357538798876453299354030394366165285575510074747223331871170
GCF_019279795.1NC_056750NC_056750.1Protopterus annectens isolate FY-2018-M chromosome 16.part0; PAN1.0; whole genome shotgun sequence.255126217254880079171753340172054598286745998824888330.290.290.190.190.030.390.94170.00140.99861.95454154338481258251781310320199115003887436635137781874492220570.280.290.20.210.020.410.92240.08880.92021.9561410163304325629319620262837209113233990010255600.310.250.20.2300.440.86770.31950.7451.945501047266691091071817632667672956569108018003739188950.290.310.20.190.010.390.92460.09980.90921.950606745112217852133813352147250712000.310.270.190.2300.420.85320.34890.72971.920503438850354724422840042271162337737118789970.30.320.190.200.380.91290.13350.88281.944103447811188150014511923060620.20.250.240.3200.560.88970.26760.77041.969401127785658103080.250.280.210.2600.470.87390.15880.85711.99170963110184446564067080699757337049391758397533103756393132767276538577763875398721483834420397367411033442794117670447986333525359123718536986614763453526414289329558148991154931284683531829478008533858631243905502151245037671421401261108214977277330350401610
GCF_019279795.1NC_056751NC_056751.1Protopterus annectens isolate FY-2018-M chromosome 17.part0; PAN1.0; whole genome shotgun sequence.244971354245308481163765987163472892185451248360638380.290.290.20.20.020.390.94240.00160.99841.959320306626100781949104561739718410206910378766200103529085050.280.30.20.20.010.410.92730.08460.92521.95711365422922945825757321465117037617951508221150.310.260.20.2300.430.86580.31530.74861.944208337575086610462598714735742031948420682921200720.290.310.20.190.010.390.92370.10210.90791.952805848106193491877111994122350623490.310.270.210.2100.420.85720.41980.69061.876703036928310355920399401976625143562103006140.290.310.20.190.010.390.91310.14440.87591.94650201939581777666867028910.20.270.230.300.530.88230.28640.75961.9707045938693496366146130156390.250.240.230.2800.520.89660.13840.87321.9939074007682384345655559487442725352292448505756781750571036443651204216496547106013734825723480499184983084409052834211481441355362278941336549377642191970393525444019728943922353906437321576402439856669337464595412635795441207988780611347704322845961348
NANC_018822NC_018822.1Protopterus annectens mitochondrion; complete genome.48094852441325830166570.290.290.260.1600.420.93380.2660.78821.96051211330623555308116940113920.270.310.270.1500.420.89550.44760.66041.930917516143116811416866053940.260.310.260.1700.420.89130.48680.64281.92050000000NANANANANANANANANANA0000000000NANANANANANANANANANA0000000NANANANANANANANANANA063918518412514006340.290.290.20.2200.420.87240.23620.80231.94770000000000NANANANANANANANANANA023529265310259339184024407123322123388222154153476615193949771662601920303076133323162940181944681404231674323515