GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_N Number of 'N' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_N Number of 'N' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_002204515.2	NC_035107	NC_035107.1	Aedes aegypti strain LVP_AGWG chromosome 1; AaegL5.0 Primary Assembly; whole genome shotgun sequence.	95373128	95353709	60064715	60028470	7000	310827022	0.31	0.31	0.19	0.19	0.39	0.9431	0.0004	0.9996	1.9624	2101	2219	4320	54446900	54673004	34359127	34218850	2600	177700481	0.3	0.29	0.2	0.21	0.41	0.921	0.0862	0.9215	1.9656	157309	1530	1583	3113	1451618	1157123	1344036	1392858	5345635	0.27	0.22	0.24	0.26	0.51	0.8849	0.2687	0.7808	1.9619	1	33006713	33462539	20720774	20514671	1400	107706097	0.29	0.34	0.18	0.18	0	0.37	0.8797	0.2285	0.8162	1.9192	21938	443	479	922	232078	212068	147944	152918	745008	0.31	0.28	0.2	0.21	0	0.41	0.8819	0.233	0.8046	1.9441	0	737892	754318	433517	432106	100	2357933	0.32	0.37	0.16	0.16	0	0.32	0.8397	0.295	0.765	1.8609	96	112	208	3054	3644	3895	4652	15245	0.2	0.24	0.26	0.31	0.56	0.888	0.2059	0.8216	1.9724	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	35854	46660	16592	21709	30224	37344	26765	27398	29168	29236	30567	53272	27213	33318	24299	41930	19282	32553	36879	21159	42409	23361	21910	40353	37688	30808	16399	28930	16212	40694	40661	18918	24023	16302	27891	33417	25673	18766	26114	32237	31395	21043	41820	25487	25728	26014	17187	23760	19068	24318	34203	26154	11276	18258	20458	31704	6888	31350	33794	19948	40081	8975	20763	34173
GCF_002204515.2	NC_035108	NC_035108.1	Aedes aegypti strain LVP_AGWG chromosome 2; AaegL5.0 Primary Assembly; whole genome shotgun sequence.	147359930	147363205	89825257	89872124	5200	474425716	0.31	0.31	0.19	0.19	0.38	0.9432	0.0003	0.9997	1.9572	3512	3566	7078	86721699	87087222	52969285	52763025	1800	279543031	0.3	0.29	0.2	0.21	0.4	0.9208	0.0848	0.9228	1.9618	192052	2670	2686	5356	2484227	1981587	2119563	2188903	8774280	0.28	0.23	0.23	0.25	0.49	0.8842	0.2729	0.7778	1.9606	60	52956375	53729791	32121279	31790199	800	170598444	0.3	0.35	0.18	0.18	0	0.35	0.8761	0.2254	0.8181	1.9065	185071	659	615	1274	319351	289696	200373	207529	1016949	0.31	0.28	0.2	0.21	0	0.4	0.8801	0.24	0.7997	1.9385	8	1418140	1438133	857458	857661	0	4571392	0.32	0.36	0.16	0.17	0	0.32	0.8403	0.2977	0.7623	1.8629	163	188	351	5178	5945	6549	7947	25619	0.2	0.23	0.25	0.31	0.56	0.896	0.2033	0.8237	1.9725	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	61186	76305	29827	37558	50161	56638	44536	51185	44911	46988	57521	91264	47107	50583	40663	69658	32181	51406	59791	40934	62914	37619	33887	68120	59871	47381	28745	51118	31673	63622	64066	33049	37559	31595	49346	50122	41736	28356	43476	47275	49117	30463	79913	37263	41681	46370	24381	41340	32940	43283	51881	36118	22822	29503	31362	53447	13253	43752	47974	32202	71219	17644	35401	52590
GCF_002204515.2	NC_035109	NC_035109.1	Aedes aegypti strain LVP_AGWG chromosome 3; AaegL5.0 Primary Assembly; whole genome shotgun sequence.	126755931	126748143	78153800	78114661	5135	409777670	0.31	0.31	0.19	0.19	0.38	0.9427	0.0003	0.9997	1.959	3241	3149	6390	71655084	71895317	44279084	44167205	1500	231998190	0.3	0.29	0.2	0.21	0.41	0.9206	0.0891	0.9196	1.964	73697	2477	2397	4874	2242810	1784706	1951029	2017662	7996207	0.28	0.23	0.24	0.25	0.49	0.8859	0.2661	0.7821	1.9638	4	40684552	41301859	24952134	24723341	800	131662686	0.3	0.35	0.18	0.18	0	0.36	0.8754	0.229	0.8152	1.9087	0	597	538	1135	296287	270093	188894	194106	949380	0.31	0.28	0.2	0.21	0	0.41	0.8814	0.2444	0.7977	1.9386	0	1264369	1284896	768517	770137	0	4087919	0.32	0.36	0.16	0.17	0	0.32	0.8408	0.2995	0.7608	1.8664	149	149	298	4431	5117	5650	6807	22005	0.2	0.23	0.26	0.31	0.57	0.8944	0.1865	0.8359	1.9731	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	55217	74395	25769	33811	44784	52242	41243	44885	41527	41916	50407	83268	41033	46581	36414	63574	29304	46249	54306	36073	59158	34657	31649	62647	55743	44645	25543	47003	27425	58619	59209	29802	34454	26999	42955	46394	37612	26136	39704	45969	45222	29150	70838	35515	37854	41796	22536	36954	29907	37970	47889	33878	19524	26924	29069	48148	11490	40961	45017	30853	62855	15251	31188	49406
NA	NC_035159	NC_035159.1	Aedes aegypti strain LVP_AGWG mitochondrion; complete genome.	6744	6514	2129	1403	0	16790	0.4	0.39	0.13	0.08	0.21	0.8848	0.2229	0.8124	1.7355	23	15	38	4989	6379	1597	1787	0	14752	0.38	0.41	0.1	0.11	0.21	0.8273	0.3081	0.7538	1.7187	14	1	3	4	1281	1883	359	542	4065	0.31	0.47	0.09	0.13	0.22	0.8468	0.4849	0.6146	1.7235	7	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	14	9	23	630	595	137	178	1540	0.41	0.39	0.09	0.12	0.2	0.8125	0.2746	0.7839	1.7032	2	2	790	864	141	226	2021	0.39	0.42	0.08	0.11	0	0.19	0.8247	0.2497	0.7941	1.6881	19	11	30	40	11	2	40	104	4	1	72	21	13	1	35	2	48	1	4	123	1	15	1	18	3	1	8	12	73	38	5	10	1	88	19	3	2	0	2	1	1	0	25	2	1	39	24	24	23	18	3	2	207	22	0	8	0	2	3	3	21	4	29	11