GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_N Number of 'N' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_N Number of 'N' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_N Number of 'N' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_035046485.1	NC_085136	NC_085136.1	Aedes albopictus strain Foshan chromosome 1; AalbF5; whole genome shotgun sequence.	99304588	99252796	69592680	69584368	443222	338177654	0.29	0.29	0.21	0.21	0.41	0.9441	0.0003	0.9997	1.9769	3104	3123	6227	56924144	57007057	40104307	39996571	168156	194200235	0.29	0.27	0.22	0.23	0.44	0.9219	0.1077	0.9029	1.9761	1285496	2463	2452	4915	2547590	2036745	2335548	2438273	0	9358156	0.27	0.22	0.25	0.26	0.51	0.8875	0.2642	0.7835	1.9632	15	29025569	29533172	20308123	20056184	85805	99008853	0.28	0.33	0.19	0.19	0	0.39	0.8751	0.2605	0.7918	1.9226	435	428	863	835461	798860	548971	555791	2739083	0.3	0.27	0.21	0.22	0	0.42	0.8931	0.1941	0.8344	1.9584	1898227	1905951	1302132	1299171	7092	6412573	0.3	0.35	0.16	0.18	0	0.34	0.8477	0.3077	0.7555	1.8806	101	136	237	3392	4265	4254	5414	17325	0.2	0.25	0.25	0.31	0.56	0.8847	0.2535	0.7819	1.9669	2	0	2	588	546	437	534	2105	0.28	0.24	0.23	0.25	0.48	0.9078	0.1562	0.8594	1.9911	60881	86887	34610	36220	56238	73677	48227	47773	48064	50150	52382	99335	44829	55980	39891	75813	32046	60996	66405	40633	74570	41736	39832	72918	69156	52605	32039	53384	28149	65343	68244	35619	45314	28954	48155	65347	45359	31396	46458	54322	51394	36114	76763	42203	42540	49422	28698	40735	32036	41984	57170	48260	21158	31837	33859	54487	8858	51191	59140	37176	69205	10989	24686	54996
GCF_035046485.1	NC_085137	NC_085137.1	Aedes albopictus strain Foshan chromosome 2; AalbF5; whole genome shotgun sequence.	155901471	155918464	103211061	103103575	590883	518725454	0.3	0.3	0.2	0.2	0.4	0.9436	0.0006	0.9994	1.9693	4808	4511	9319	95306722	95629760	63228344	63028707	262306	317455839	0.29	0.28	0.21	0.22	0.43	0.9212	0.1011	0.9091	1.9738	2071683	3696	3544	7240	3689569	2946355	3253228	3379875	1	13269028	0.28	0.23	0.24	0.26	0.49	0.8856	0.2718	0.7786	1.9609	13	51003539	51850209	33465952	33119407	117166	169556273	0.29	0.34	0.18	0.18	0	0.37	0.8745	0.2518	0.7982	1.9131	575	634	1209	747267	718651	483459	497916	2447293	0.3	0.28	0.21	0.22	0	0.42	0.8868	0.2149	0.8193	1.9517	3627293	3655907	2394508	2394924	11684	12084316	0.31	0.35	0.16	0.18	0	0.34	0.8477	0.2987	0.763	1.8761	149	152	301	4299	5301	5499	6963	22062	0.2	0.24	0.25	0.32	0.56	0.8953	0.2503	0.7852	1.9666	272	0	272	7926	7892	7895	8687	32400	0.24	0.24	0.24	0.27	0.51	0.8929	0.051	0.9514	1.9987	88827	122058	48911	53720	78169	98150	68075	72877	66728	70586	79202	142590	65610	76726	58136	107030	46009	84611	92800	61157	100704	57583	54264	104404	95340	73505	45915	77906	43617	92066	96359	50918	62202	44549	71338	86778	64392	43263	66638	73276	71857	48176	116410	56538	60508	71731	37536	58737	47840	61642	78257	62543	32832	44794	47012	79514	14600	67665	77975	51699	103365	19321	39837	78120
GCF_035046485.1	NC_085138	NC_085138.1	Aedes albopictus strain Foshan chromosome 3; AalbF5; whole genome shotgun sequence.	134247716	134345939	90474894	90509758	610199	450188506	0.3	0.3	0.2	0.2	0.4	0.9431	0.0006	0.9994	1.9717	4066	4110	8176	77927436	78113409	52639028	52513623	240524	261434020	0.29	0.27	0.21	0.22	0.43	0.9214	0.1064	0.9044	1.9731	1223217	3298	3293	6591	3413800	2725098	3034991	3163356	0	12337245	0.28	0.22	0.24	0.26	0.5	0.8867	0.2659	0.7821	1.9635	846	38154600	38782754	25437236	25211868	104144	127690602	0.29	0.34	0.18	0.19	0	0.37	0.8734	0.2566	0.7945	1.9151	531	515	1046	874593	854765	559317	571971	2860646	0.3	0.28	0.2	0.21	0	0.42	0.8896	0.2013	0.8297	1.9533	3425152	3448083	2276797	2266337	17523	11433892	0.31	0.35	0.16	0.18	0	0.34	0.8473	0.3094	0.7554	1.8732	121	128	249	3551	4401	4680	5880	18512	0.19	0.24	0.25	0.32	0.57	0.8917	0.2381	0.7937	1.9651	4	1	5	2185	2040	1856	2202	8283	0.26	0.24	0.23	0.26	0.49	0.9171	0.1352	0.8759	1.9931	83249	115195	45466	49720	72469	92448	63070	66888	61894	65305	72250	133056	59683	72081	53471	99562	42811	78333	86310	56054	95571	53811	51061	97905	89208	68234	42769	72603	39476	85215	89401	47386	57091	40527	64863	82167	59203	40540	62175	68461	67675	46382	105934	52946	56604	66157	35571	54638	44378	55977	72964	59269	29391	41690	44756	73587	13319	64068	73940	48573	94318	17033	35481	74209
NA	NC_006817	NC_006817.1	Aedes albopictus mitochondrion; complete genome.	6680	6575	2014	1396	0	16665	0.4	0.39	0.12	0.08	0.2	0.882	0.1892	0.8387	1.7262	22	15	37	5091	6497	1511	1748	0	14847	0.38	0.41	0.09	0.11	0.21	0.8326	0.2923	0.7646	1.7126	19	3	3	6	1902	2694	634	761	0	5991	0.32	0.45	0.11	0.12	0.23	0.8565	0.3777	0.6923	1.7497	7	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	13	9	22	599	581	133	172	1485	0.4	0.39	0.09	0.12	0.21	0.8267	0.2668	0.79	1.7101	0	2	2	836	922	134	245	2137	0.39	0.43	0.06	0.12	0.18	0.808	0.3317	0.7353	1.6657	16	4	48	50	30	4	60	178	3	4	100	30	32	1	31	5	63	6	9	183	0	22	2	29	1	4	13	11	92	69	3	23	1	120	41	1	4	4	7	3	2	2	41	4	2	45	25	31	28	46	2	0	273	43	2	18	0	4	1	2	38	6	53	22