GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	fr_tRNA_N Frequency of 'N' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_027943255.1	NC_072892	NC_072892.1	Anastrepha obliqua isolate idAnaObli1 chromosome 1; idAnaObli1_1.0; whole genome shotgun sequence.	58317923	58247668	34174877	34207734	100	184948302	0.32	0.31	0.18	0.18	0.37	0.9467	0.0011	0.9989	1.9505	1721	1682	3403	22004358	22114516	12870222	12814770	69803866	0.32	0.3	0.19	0.2	0.38	0.9194	0.1006	0.9088	1.9502	52983	1592	1554	3146	1638344	1339340	1211482	1259761	5448927	0.3	0.26	0.21	0.23	0.44	0.8842	0.2583	0.7872	1.9584	35	14365433	14756542	8311598	8198229	45631802	0.32	0.37	0.15	0.16	0.31	0.858	0.2503	0.7979	1.8581	70	67	137	30207	26180	15993	16707	89087	0.33	0.3	0.18	0.19	0.37	0.8707	0.2718	0.776	1.9164	0	262370	265785	150590	151721	830466	0.33	0.38	0.14	0.15	0.29	0.8333	0.2948	0.7707	1.8252	40	28	68	951	1176	1261	1696	5084	0.19	0.23	0.25	0.33	0	0.58	0.877	0.2694	0.7722	1.9607	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	43814	40055	22164	25687	42202	30705	30057	41207	16579	28966	53195	49817	30672	24905	25612	36501	19035	33581	27444	35968	28398	24997	17641	39942	33057	21907	20708	41022	29389	21973	28217	22052	18219	33474	41281	24195	26727	12607	25566	25439	30145	26632	62486	27950	27940	26776	10320	22211	21671	30234	25185	28989	27453	15457	14929	33214	9897	15138	20502	22932	54058	17191	21662	23764
GCF_027943255.1	NC_072893	NC_072893.1	Anastrepha obliqua isolate idAnaObli1 chromosome 2; idAnaObli1_1.0; whole genome shotgun sequence.	42420333	42397095	24846558	24873339	100	134537425	0.32	0.32	0.18	0.18	0.37	0.9475	0.0008	0.9992	1.9503	1457	1350	2807	15916900	15939841	9294118	9243145	50394004	0.31	0.3	0.19	0.2	0.39	0.917	0.1102	0.9011	1.9514	64192	1223	1248	2471	1304589	1066406	968978	1008042	4348015	0.3	0.26	0.21	0.23	0.44	0.8846	0.2625	0.7849	1.956	10	9599225	9854046	5542320	5443865	30439456	0.32	0.37	0.15	0.16	0.31	0.8548	0.2584	0.792	1.8558	68	52	120	23595	19756	12474	13474	69299	0.33	0.29	0.18	0.2	0.38	0.874	0.2636	0.7805	1.9253	0	195365	196092	107026	108382	606865	0.33	0.39	0.14	0.14	0.28	0.8374	0.2903	0.7693	1.8159	41	25	66	951	1134	1228	1542	4855	0.2	0.24	0.25	0.32	0	0.57	0.8941	0.2265	0.804	1.9716	101	0	101	2820	2541	3120	3540	12021	0.23	0.21	0.26	0.29	0	0.55	0.9035	0.1166	0.8899	1.989	33924	31432	17843	20963	32943	25558	24168	32603	13316	22377	42434	41860	24336	20201	20949	28212	15819	26848	21497	28414	23024	20413	13918	32641	26009	17556	17268	31991	23640	17420	21828	17718	14554	26623	32854	19244	21532	10082	19988	20230	24378	22302	50066	22667	22382	21201	7893	17683	17560	24454	20018	23638	21722	12594	11674	26067	7581	12146	16378	18683	42234	13012	16445	19013
GCF_027943255.1	NC_072894	NC_072894.1	Anastrepha obliqua isolate idAnaObli1 chromosome 3; idAnaObli1_1.0; whole genome shotgun sequence.	45941087	45916240	26844840	26880462	100	145582729	0.32	0.32	0.18	0.18	0.37	0.9428	0.0009	0.9991	1.9499	1449	1380	2829	16896540	16887905	9826763	9787322	53398530	0.32	0.3	0.19	0.19	0.38	0.9178	0.1061	0.9042	1.9498	69932	1344	1258	2602	1347816	1094160	984862	1012972	4439810	0.3	0.26	0.21	0.23	0.44	0.8825	0.2667	0.7817	1.9544	29	10635166	10885594	6128092	6050521	33699373	0.33	0.37	0.15	0.15	0.31	0.8569	0.2397	0.8057	1.8539	68	81	149	29653	26784	16522	18063	91022	0.33	0.29	0.18	0.2	0.38	0.8731	0.2628	0.7818	1.9201	0	231771	250061	138002	135780	755614	0.33	0.38	0.14	0.15	0.29	0.8357	0.2854	0.7721	1.8231	18	14	32	474	583	607	733	2397	0.2	0.24	0.25	0.31	0	0.56	0.8933	0.1948	0.8283	1.9781	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	34984	32996	18883	21468	33570	24417	25751	33341	13664	22373	43865	42589	25164	19657	21420	30018	15816	26203	22287	28679	22196	20440	14056	33213	27514	17683	17091	32982	24657	18224	22341	18443	14754	27616	33429	19328	21767	10702	21038	20481	24415	20955	52413	21831	22111	22402	8079	18277	17588	25046	19878	21834	23085	13293	11839	28237	8040	11952	16259	19316	44051	14117	17520	18923
GCF_027943255.1	NC_072895	NC_072895.1	Anastrepha obliqua isolate idAnaObli1 chromosome 4; idAnaObli1_1.0; whole genome shotgun sequence.	40335856	40303573	23271427	23281008	0	127191864	0.32	0.32	0.18	0.18	0.37	0.9469	0.0006	0.9994	1.9476	1469	1472	2941	16768328	16787425	9636441	9593666	52785860	0.31	0.3	0.19	0.2	0.39	0.9175	0.1024	0.9071	1.949	79122	1341	1323	2664	1392844	1156559	1022462	1063353	4635218	0.3	0.26	0.21	0.23	0.44	0.8835	0.2596	0.7863	1.956	0	9925637	10176063	5629626	5542482	31273808	0.33	0.37	0.15	0.16	0.31	0.8544	0.2523	0.7963	1.8527	61	55	116	24686	22354	13784	14556	75380	0.33	0.3	0.18	0.19	0.37	0.8713	0.2554	0.7867	1.9194	67	160599	166945	91931	92997	512472	0.33	0.38	0.13	0.16	0.29	0.8488	0.2786	0.7802	1.8311	53	73	126	1747	2112	2449	3011	9319	0.19	0.23	0.26	0.32	0	0.59	0.8869	0.2383	0.794	1.9601	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	36410	33768	18937	21783	34472	25989	25337	35783	14350	24919	45195	43659	25551	20722	22072	30224	17053	27897	24531	31917	23827	21662	15305	34824	26974	18697	17862	34855	26310	18950	24451	19623	15344	29139	34414	20199	22661	10591	21975	21015	25319	23027	54519	23453	24003	22761	8484	18795	18728	25601	21082	23514	23896	13305	12322	27468	8225	12817	16438	20422	44422	14683	18352	20371
GCF_027943255.1	NC_072896	NC_072896.1	Anastrepha obliqua isolate idAnaObli1 chromosome 5; idAnaObli1_1.0; whole genome shotgun sequence.	40846655	40816934	23926797	23902400	100	129492886	0.32	0.32	0.18	0.18	0.37	0.9474	0.0009	0.9991	1.9502	1209	1294	2503	15206645	15248025	8850025	8827189	48131884	0.31	0.3	0.19	0.2	0.39	0.9168	0.1082	0.9025	1.9495	34817	1113	1144	2257	1182394	983259	875316	913008	3953977	0.3	0.26	0.21	0.23	0.44	0.8854	0.256	0.7889	1.9569	0	9576107	9804288	5524556	5451463	30356414	0.33	0.37	0.15	0.16	0.31	0.8555	0.2492	0.7992	1.8548	47	68	115	22239	20066	11909	12906	67120	0.33	0.3	0.18	0.2	0.37	0.8729	0.2568	0.7855	1.9198	0	339637	346340	187920	188753	1062650	0.33	0.38	0.13	0.15	0.29	0.8423	0.3133	0.7552	1.8188	32	52	84	1084	1392	1672	1973	6121	0.18	0.23	0.27	0.32	0	0.59	0.8808	0.234	0.8	1.9495	0	4	4	111	100	124	141	476	0.23	0.21	0.26	0.3	0	0.56	0.9044	0.1162	0.8903	1.9881	31866	29130	16569	18717	30055	22427	22335	29944	11967	21248	38848	37372	22115	18037	18723	24813	13975	24591	19400	26416	20725	18721	12701	29607	22832	15537	15110	30750	21702	15718	20509	16941	13761	24754	29424	17063	19949	9011	18359	18742	20933	19832	45899	19551	20292	19949	7234	15296	16149	22569	17923	20932	20346	11775	10469	23886	6690	10962	14350	17705	38399	11986	14602	16767
GCF_027943255.1	NC_072897	NC_072897.1	Anastrepha obliqua isolate idAnaObli1 chromosome 6; idAnaObli1_1.0; whole genome shotgun sequence.	24986928	24990049	15422272	15450259	500	80850008	0.31	0.31	0.19	0.19	0.38	0.9284	0.001	0.999	1.9593	451	491	942	3919204	3974508	2521130	2506857	12921699	0.31	0.28	0.2	0.21	0.41	0.9115	0.1662	0.8549	1.9589	1532	339	401	740	337669	268768	228709	232776	1067922	0.32	0.25	0.2	0.22	0.42	0.8873	0.2789	0.7735	1.9377	8	2430921	2515543	1542094	1532081	8020639	0.33	0.36	0.16	0.16	0.32	0.8557	0.23	0.8112	1.8616	69	80	149	23126	23179	13694	15458	75457	0.31	0.3	0.18	0.21	0.39	0.8675	0.2756	0.7709	1.9286	0	93262	97328	60472	61506	312568	0.34	0.4	0.12	0.15	0.27	0.8035	0.3469	0.7339	1.7868	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	30	0	30	22142	21899	13276	16640	73957	0.29	0.29	0.18	0.23	0	0.41	0.9218	0.1222	0.8888	1.9723	8033	8696	4996	5388	8086	6496	6095	8922	3484	4999	10640	11338	6846	4583	4820	8050	4585	5308	5330	7633	5334	4660	3732	8449	5958	3995	4630	7330	5348	4526	5663	5450	3788	7451	8080	6304	4506	2291	4363	4297	5251	3863	14715	3694	4368	5843	2220	4774	3998	5994	4679	3958	6802	3516	3239	6285	1579	2556	3289	4087	10419	3050	2569	4283