GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_N Number of 'N' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_016920715.1	NC_053517	NC_053517.1	Anopheles arabiensis isolate DONGOLA chromosome 2; AaraD3; whole genome shotgun sequence.	30897043	30867341	25121781	25101289	900	111988354	0.28	0.28	0.22	0.22	0.45	0.9607	0.0009	0.9991	1.9923	3642	3935	7577	21176267	21282365	17852275	18387038	200	78698145	0.27	0.25	0.24	0.25	0.49	0.9218	0.1111	0.8986	1.9877	90505	3191	3128	6319	2748958	2158465	3054020	3219503	11180946	0.26	0.21	0.26	0.28	0.53	0.8818	0.2654	0.7834	1.9566	25	9468996	10150992	7765023	7787813	100	35172924	0.25	0.32	0.21	0.21	0	0.42	0.8788	0.3144	0.7495	1.9371	0	211	215	426	151947	140906	116553	123359	532765	0.28	0.26	0.22	0.23	0	0.45	0.8848	0.2455	0.7966	1.9607	0	313442	329163	256192	261168	1159965	0.28	0.35	0.19	0.18	0	0.37	0.8634	0.3034	0.7576	1.8976	132	112	244	3400	4233	4673	5716	18022	0.19	0.24	0.26	0.32	0.57	0.8882	0.2362	0.7972	1.9653	337	337	10786	9102	9773	10449	40110	0.27	0.23	0.24	0.26	0.5	0.8869	0.1181	0.8896	1.997	68746	90785	36313	34271	82676	87419	63889	39114	51556	58275	44168	84460	42422	92799	39275	82918	28886	88268	60281	39814	109709	57799	44768	72789	93279	66200	30011	39638	23990	64420	80774	29994	48126	28479	55001	74638	63337	39020	60947	79503	87168	76658	66945	82726	65551	39814	41477	37063	37310	46582	84763	90749	20010	29426	41055	57868	11068	84994	94415	50409	67173	15119	35268	76778
GCF_016920715.1	NC_053518	NC_053518.1	Anopheles arabiensis isolate DONGOLA chromosome 3; AaraD3; whole genome shotgun sequence.	26922078	26843360	20987754	20956518	500	95710210	0.28	0.28	0.22	0.22	0.44	0.9595	0.0022	0.9978	1.989	2645	2705	5350	17285909	17484279	13926695	14424664	100	63121647	0.27	0.25	0.23	0.25	0.48	0.923	0.1113	0.8987	1.9856	44195	2367	2326	4693	2126646	1705372	2289898	2436762	8558678	0.26	0.21	0.25	0.27	0.53	0.883	0.2643	0.7846	1.9566	853	7929039	8479878	6209547	6280925	100	28899489	0.26	0.33	0.2	0.2	0	0.4	0.8752	0.313	0.7509	1.9271	42072	208	232	440	149084	138449	114642	120663	522838	0.29	0.26	0.22	0.23	0	0.45	0.8837	0.2428	0.7971	1.9558	0	495491	527874	385908	396265	1805538	0.29	0.35	0.18	0.18	0	0.36	0.8655	0.2959	0.7644	1.8972	60	89	149	2020	2551	2792	3551	10914	0.19	0.23	0.26	0.33	0.58	0.8856	0.2618	0.7772	1.9598	1	1	32	30	28	29	119	0.27	0.25	0.24	0.24	0.48	0.8809	0.0498	0.9515	1.9982	53317	70399	28704	27577	61755	68334	48832	32116	39292	45225	36220	66189	33415	68472	30234	63438	22705	68448	47123	32938	82594	44492	34637	58595	69564	48511	23253	32271	21069	51097	62097	24305	36824	23008	42117	55648	48745	29016	49008	56850	62675	55526	52408	60562	50277	32318	32420	28036	31178	37055	61872	65507	17147	23117	29262	43547	8860	62625	67746	37242	52287	12636	27650	56627
GCF_016920715.1	NC_053519	NC_053519.1	Anopheles arabiensis isolate DONGOLA chromosome X; AaraD3; whole genome shotgun sequence.	7276483	7277603	6184474	6174273	300	26913133	0.27	0.27	0.23	0.23	0.46	0.9587	0.0009	0.9991	1.9952	626	698	1324	3979040	3995558	3541774	3566964	0	15083336	0.26	0.25	0.25	0.25	0.5	0.9219	0.0966	0.9119	1.9856	6365	550	567	1117	445607	347422	621467	640732	2055228	0.23	0.19	0.28	0.29	0.58	0.8726	0.2694	0.7822	1.9365	0	1868563	1988620	1542739	1514438	0	6914360	0.23	0.31	0.24	0.21	0	0.45	0.8793	0.3375	0.7386	1.9377	0	66	72	138	50691	47671	39296	40942	178600	0.29	0.27	0.21	0.23	0	0.44	0.8811	0.2593	0.7886	1.9541	6	86594	91338	71027	70018	318977	0.29	0.36	0.18	0.17	0	0.35	0.8546	0.2855	0.7691	1.8818	1	1	2	28	36	38	43	145	0.19	0.25	0.26	0.3	0.56	0.8679	0.1917	0.8304	1.98	42	42	7293	6791	7603	8505	30192	0.28	0.22	0.25	0.26	0.51	0.8929	0.1408	0.8745	1.9929	10460	14740	5055	5756	15433	18527	12458	3962	9296	10314	5027	11099	6671	18065	6061	13718	4941	16362	10183	4914	23524	10055	9842	9949	20247	14133	4623	4604	2887	10414	13691	4107	10169	3798	8258	16288	13072	8457	10973	18934	18418	18244	7350	21340	13614	5295	9876	5860	5711	7399	16564	22736	2413	5410	7399	10010	1408	21017	22200	8503	10281	1674	5480	14448
NA	NC_028212	NC_028212.1	Anopheles arabiensis voucher AARAB20150811V4 mitochondrion; complete genome.	6160	5765	1992	1452	0	15369	0.4	0.38	0.13	0.09	0.22	0.8876	0.1899	0.8324	1.763	22	15	37	5029	6404	1579	1840	0	14852	0.37	0.41	0.1	0.12	0.22	0.8369	0.2792	0.7722	1.736	76	1	1	2	790	1081	240	313	2424	0.33	0.44	0.11	0.12	0.24	0.851	0.3474	0.7071	1.7689	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	13	9	22	575	578	141	183	1477	0.39	0.39	0.1	0.12	0.22	0.8323	0.255	0.794	1.7365	2	2	840	930	146	265	2181	0.38	0.42	0.07	0.12	0.19	0.8177	0.3343	0.7311	1.6927	6	9	22	26	10	0	25	57	1	0	44	14	17	0	16	2	24	2	8	60	2	15	0	13	1	0	1	4	36	20	1	6	0	55	15	2	1	0	1	3	1	0	11	2	1	25	6	21	10	11	1	1	131	19	0	4	0	2	1	0	16	2	18	6