GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	fr_gene_N Frequency of 'N' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	fr_cds_N Frequency of 'N' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_N Number of 'N' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	fr_tRNA_N Frequency of 'N' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_943734845.2	NC_064597	NC_064597.1	Anopheles funestus chromosome X; idAnoFuneDA-416_04; whole genome shotgun sequence.	6428876	6406635	4731015	4697098	700	22264324	0.29	0.29	0.21	0.21	0.42	0.9566	0.0053	0.9947	1.983	643	632	1275	4615927	4604033	3439614	3495193	500	16155267	0.28	0.27	0.22	0.23	0	0.44	0.9237	0.0915	0.9156	1.9823	41632	593	579	1172	565770	463731	554695	588147	2172343	0.27	0.22	0.24	0.26	0	0.51	0.8864	0.2524	0.7923	1.9652	59	1517298	1619213	1111770	1097783	500	5346564	0.27	0.35	0.2	0.19	0	0.39	0.8732	0.3067	0.7546	1.9159	0	45	38	83	53263	55159	33556	36294	178272	0.3	0.3	0.2	0.21	0	0.41	0.8707	0.242	0.7996	1.9412	0	267487	274224	189088	196814	927613	0.29	0.35	0.17	0.19	0	0.36	0.8616	0.2597	0.7896	1.9045	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	14810	15332	10552	7796	16222	14349	11448	8928	9556	11225	10864	17835	9357	17135	8500	16652	6281	15991	10825	9358	17823	15501	7825	16089	17564	13137	7553	10021	7072	12208	15251	6747	8939	7831	12624	12330	12571	5711	12805	11475	14123	11547	14425	11359	11517	9794	6354	6704	8441	10771	14473	14203	6150	5121	6935	11505	2931	14846	16710	11208	14962	4172	6889	13469
GCF_943734845.2	NC_064598	NC_064598.1	Anopheles funestus chromosome 2RL; idAnoFuneDA-416_04; whole genome shotgun sequence.	30016441	30179815	21319696	21366659	900	102883511	0.29	0.29	0.21	0.21	0.41	0.9594	0.0038	0.9962	1.979	3198	3198	6396	23706166	23825853	17076401	17614653	0	82223073	0.29	0.27	0.21	0.23	0	0.44	0.9229	0.1036	0.9051	1.9814	312300	2938	2915	5853	3002268	2454858	2703538	2888452	11049116	0.28	0.23	0.24	0.26	0	0.49	0.8872	0.2533	0.7914	1.9671	1362	9181386	9798501	6474996	6541169	0	31996052	0.27	0.35	0.19	0.19	0	0.38	0.8756	0.2878	0.7667	1.9205	33650	145	139	284	212803	212251	132134	145155	702343	0.3	0.29	0.19	0.21	0	0.4	0.8694	0.2204	0.8157	1.9416	212	1103383	1147128	770776	800299	3821586	0.3	0.34	0.17	0.19	0	0.37	0.8524	0.2181	0.8206	1.913	1778	82	82	164	2255	2826	3130	3910	12121	0.19	0.23	0.26	0.32	0	0.58	0.886	0.2365	0.7958	1.9632	0	1	1	32	27	30	30	119	0.27	0.23	0.25	0.25	0	0.5	0.8747	0.0847	0.9219	1.9974	78200	86556	49702	40799	78276	67379	57190	55505	48280	59142	63490	104090	50555	80615	46437	84693	34278	78960	62404	52501	81098	66052	38253	87976	78536	59162	38452	57267	37536	67072	80598	39402	43787	39993	66485	58052	58629	28835	62136	55403	67798	51969	89127	52528	56543	53148	29482	39909	45131	55319	74730	60617	32955	28739	36116	59148	16223	64172	72492	53760	77226	23828	39729	70961
GCF_943734845.2	NC_064599	NC_064599.1	Anopheles funestus chromosome 3RL; idAnoFuneDA-416_04; whole genome shotgun sequence.	24924311	24961312	17345883	17403135	2000	84636641	0.29	0.29	0.2	0.21	0.41	0.9582	0.0024	0.9976	1.9768	2727	2602	5329	19805267	19859211	13924576	14319846	0	67908900	0.29	0.27	0.21	0.23	0	0.44	0.921	0.1042	0.9046	1.9801	773812	2377	2351	4728	2371236	1925915	2099637	2245425	8642213	0.28	0.23	0.23	0.26	0	0.49	0.8862	0.2577	0.7881	1.9656	1979	7772819	8286914	5379845	5415759	0	26855337	0.28	0.35	0.18	0.19	0	0.37	0.8738	0.2864	0.7681	1.9157	53065	137	124	261	171505	167706	103243	112529	554983	0.3	0.29	0.19	0.21	0	0.41	0.8744	0.2084	0.8231	1.9465	0	712018	723527	470558	479307	2385410	0.31	0.34	0.17	0.19	0	0.36	0.8584	0.2008	0.8321	1.9081	0	81	71	152	2155	2630	2886	3502	11173	0.2	0.24	0.25	0.31	0	0.57	0.892	0.2286	0.8045	1.9673	100	0	100	3097	2708	3007	3102	11914	0.26	0.23	0.25	0.26	0	0.51	0.8808	0.0826	0.9219	1.9978	61227	69208	39317	32098	60823	53541	44863	44211	38307	45056	51013	82247	39319	62434	36148	67425	26986	61323	48976	41575	62459	52772	29333	70850	61775	46343	30253	44383	29753	53357	62651	30987	33282	31998	52052	45855	45486	21941	48481	42034	52244	39277	71387	40120	43194	42053	22358	31657	35700	43257	57492	46337	26668	22787	27687	46301	12324	48570	56209	41454	62294	19011	29767	54543
NA	NC_064603	NC_064603.1	Anopheles funestus genome assembly; organelle: mitochondrion.	6210	5857	1942	1397	0	15406	0.4	0.38	0.13	0.09	0.22	0.8815	0.1925	0.8313	1.7495	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0