GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_N Number of 'N' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_943734735.2	NC_064600	NC_064600.1	Anopheles gambiae chromosome X; idAnoGambNW_F1_1; whole genome shotgun sequence.	7687885	7673443	6379580	6353081	3900	28097889	0.27	0.27	0.23	0.23	0.45	0.9582	0.003	0.997	1.9936	683	695	1378	4492165	4488369	3910487	3941410	1500	16833931	0.26	0.25	0.24	0.25	0.49	0.923	0.0926	0.9149	1.9845	127831	564	565	1129	469771	363536	645440	664949	2143696	0.24	0.19	0.28	0.29	0.58	0.8745	0.266	0.7842	1.938	0	2037255	2164131	1669038	1637327	500	7508251	0.23	0.31	0.24	0.21	0	0.45	0.8799	0.3349	0.7408	1.9358	0	107	108	215	118882	115589	86088	90738	411297	0.29	0.27	0.21	0.22	0	0.44	0.8889	0.2287	0.8093	1.9581	101710	104295	75149	73742	354896	0.29	0.37	0.17	0.17	0	0.34	0.8556	0.311	0.7501	1.8746	1	1	2	28	35	38	44	145	0.19	0.24	0.26	0.3	0.57	0.8709	0.189	0.8304	1.9775	9	3	12	546	406	468	476	1896	0.29	0.21	0.25	0.25	0	0.5	0.887	0.1555	0.8635	1.992	10982	15494	5411	6177	16373	19567	13001	4457	9562	10641	5493	11696	7030	18723	6437	14546	5238	16677	10361	5428	24305	10515	10141	10315	21433	14573	4879	4734	3058	10970	14262	4463	10462	4195	8740	16948	13597	8734	11475	19524	18988	18848	7921	21967	13784	5616	10341	6061	5802	7806	16976	23425	2610	5735	7673	10408	1571	21493	23179	8867	11050	1876	5661	14925
GCF_943734735.2	NC_064601	NC_064601.1	Anopheles gambiae chromosome 2; idAnoGambNW_F1_1; whole genome shotgun sequence.	32569711	32732694	26512867	26378380	3300	118196952	0.28	0.28	0.22	0.22	0.45	0.9599	0.005	0.995	1.992	3625	3815	7440	22082155	22164912	18540051	19067973	1000	81856091	0.27	0.25	0.24	0.25	0.48	0.9229	0.1109	0.8992	1.9864	143009	3217	3240	6457	2912096	2277539	3208447	3391124	11789206	0.26	0.21	0.26	0.28	0.53	0.8821	0.2638	0.7843	1.9572	718	9668002	10381545	7893408	7916704	500	35860159	0.25	0.33	0.21	0.21	0	0.42	0.8786	0.3152	0.7489	1.9362	130373	265	267	532	263444	255449	201968	209500	930361	0.29	0.27	0.22	0.23	0	0.44	0.8893	0.2415	0.7998	1.9601	308428	327131	235183	243595	1114337	0.29	0.37	0.17	0.18	0	0.35	0.8558	0.3096	0.7526	1.8779	118	128	246	3433	4269	4715	5752	18169	0.19	0.24	0.26	0.32	0.57	0.8884	0.2337	0.7992	1.9657	0	103	103	3301	2784	2987	3193	12265	0.27	0.23	0.24	0.26	0	0.5	0.8869	0.1183	0.8895	1.9969	72503	96874	38546	36398	87265	92552	67082	41617	53801	61570	46615	89334	44991	97347	41518	87314	30429	92213	62904	42476	114606	60537	46777	76621	98318	69824	31478	42242	25397	67442	84257	31277	50579	30628	58403	77822	66401	40936	63764	83266	92409	80382	71945	86616	69249	42811	43325	40379	39485	48873	89207	94919	21685	31056	44627	61518	12111	89281	99154	52956	70747	16566	37677	80812
GCF_943734735.2	NC_064602	NC_064602.1	Anopheles gambiae chromosome 3; idAnoGambNW_F1_1; whole genome shotgun sequence.	27900715	27828054	21708025	21708162	4800	99149756	0.28	0.28	0.22	0.22	0.44	0.9586	0.0013	0.9987	1.9888	2647	2746	5393	18030355	18194410	14463235	14954618	400	65643018	0.27	0.26	0.23	0.24	0.48	0.9233	0.1096	0.9003	1.9851	163860	2351	2333	4684	2185612	1749976	2336716	2488318	8760622	0.26	0.21	0.25	0.27	0.53	0.8833	0.2633	0.7852	1.9569	124	7793286	8346426	6107660	6184460	0	28431832	0.26	0.33	0.2	0.2	0	0.4	0.8753	0.3148	0.7498	1.9267	0	219	265	484	237935	231966	179516	186177	835594	0.29	0.27	0.22	0.23	0	0.44	0.8871	0.2363	0.8036	1.9583	523402	537537	378391	384029	1823359	0.29	0.36	0.17	0.17	0	0.35	0.8593	0.3135	0.7512	1.8794	65	86	151	2043	2584	2841	3591	11059	0.19	0.23	0.26	0.32	0.58	0.8853	0.2594	0.7792	1.9599	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	54806	71864	29444	28862	63411	71645	49999	33412	39731	45957	37520	68547	34246	69944	30986	65292	23345	69670	48277	34514	83954	45056	35356	60374	71231	49555	23830	33249	21754	51207	63805	25273	37935	24340	44281	57094	49751	29293	49983	58470	63913	56300	54465	61302	50886	33135	32975	28508	31764	37865	62985	67075	17952	23502	30310	44088	8903	63889	68499	37946	53123	12766	27829	57170
NA	NC_083487	NC_083487.1	Anopheles gambiae genome assembly; organelle: mitochondrion.	6151	5768	1988	1456	0	15363	0.4	0.38	0.13	0.09	0.22	0.8873	0.1866	0.8351	1.7633	22	15	37	5026	6394	1577	1837	0	14834	0.37	0.41	0.1	0.12	0.22	0.8368	0.2807	0.7711	1.7378	22	2	1	3	1153	1543	405	460	3561	0.32	0.43	0.12	0.13	0.25	0.8595	0.2921	0.75	1.792	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	13	9	22	574	578	142	185	1479	0.39	0.39	0.1	0.13	0.22	0.8327	0.2556	0.7931	1.7398	0	2	2	819	911	138	257	2125	0.38	0.43	0.07	0.12	0	0.19	0.8174	0.3486	0.722	1.6856	10	13	39	36	19	0	40	92	2	0	64	19	21	0	15	6	30	2	13	93	1	17	0	23	1	1	10	4	45	40	3	7	1	63	22	2	6	0	8	5	3	0	16	2	2	30	7	24	13	18	2	0	177	30	0	14	0	2	1	0	24	3	32	14