GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_N Number of 'N' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_N Number of 'N' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_017562075.2	NC_054081	NC_054081.1	Anopheles merus strain MAF chromosome X; AmerM5.1; whole genome shotgun sequence.	7281383	7289619	5993867	5992185	11701	26568755	0.27	0.27	0.23	0.23	0.45	0.9587	0.0007	0.9993	1.9929	597	625	1222	4008544	4036873	3528607	3557598	3900	15135522	0.26	0.25	0.25	0.25	0.5	0.9226	0.0925	0.915	1.9853	4721	534	561	1095	435211	339333	607960	627050	2009554	0.24	0.19	0.28	0.29	0.58	0.8739	0.2668	0.7836	1.9364	0	1989386	2109568	1598682	1578229	2800	7278665	0.23	0.31	0.24	0.21	0	0.45	0.8795	0.3334	0.7413	1.9356	0	48	51	99	31801	29868	23943	25000	110612	0.29	0.27	0.21	0.23	0	0.44	0.8805	0.2722	0.7792	1.9476	102228	110327	85552	86412	0	384519	0.3	0.37	0.16	0.17	0	0.34	0.8561	0.2688	0.7807	1.8796	7280	1	1	2	28	36	38	43	145	0.19	0.25	0.26	0.3	0.56	0.8679	0.1917	0.8304	1.98	1	1	34	29	25	31	119	0.29	0.24	0.21	0.26	0	0.47	0.8809	0.1865	0.8297	1.9912	10304	14592	4890	5572	15000	18570	12210	4004	9004	10060	4922	10868	6538	17759	5754	13523	4959	16037	10002	4852	23267	9759	9733	9520	19949	13650	4495	4358	2818	10190	13554	3992	9892	3716	7880	16124	12707	8326	10921	18615	17508	17844	7187	20978	13118	5088	9786	5471	5441	7230	16116	22432	2277	5270	7103	9595	1444	20478	22026	8224	10065	1754	5266	13928
GCF_017562075.2	NC_054082	NC_054082.1	Anopheles merus strain MAF chromosome 2R; AmerM5.1; whole genome shotgun sequence.	17305430	17338930	14331360	14296039	5600	63277359	0.27	0.27	0.23	0.23	0.45	0.9609	0.0022	0.9978	1.9934	1952	1977	3929	11642453	11721267	10004829	10320759	1600	43690908	0.26	0.25	0.24	0.25	0.49	0.9242	0.1088	0.9008	1.988	20804	1791	1759	3550	1626923	1279355	1817179	1915540	6638997	0.26	0.21	0.26	0.28	0.54	0.8827	0.2607	0.7866	1.9575	67	5090371	5459613	4226502	4248103	1200	19025789	0.25	0.32	0.22	0.21	0	0.43	0.8803	0.3159	0.7482	1.9409	0	86	105	191	79847	73233	60768	62716	276564	0.29	0.26	0.22	0.23	0	0.45	0.8849	0.2463	0.7952	1.9588	173481	178718	130980	138291	0	621470	0.28	0.34	0.19	0.19	0	0.38	0.8692	0.2886	0.7682	1.9078	0	60	64	124	1719	2170	2381	2947	9217	0.19	0.24	0.26	0.32	0.58	0.8847	0.2395	0.7932	1.965	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	40874	52569	21554	20527	49681	51160	38346	23142	30465	34914	25993	49812	25246	54869	23235	48762	17206	51954	35281	23705	64634	34183	26595	43225	55602	39163	17669	23659	14203	37901	47261	17558	28099	16904	32694	44357	37280	23255	35839	47192	51754	46146	39725	50227	39579	23486	24727	22271	22220	27987	50740	54207	11653	17570	24487	34513	6512	51389	56372	30057	39837	8973	21288	46222
GCF_017562075.2	NC_054083	NC_054083.1	Anopheles merus strain MAF chromosome 2L; AmerM5.1; whole genome shotgun sequence.	15142030	15099612	11990109	12008797	3100	54243648	0.28	0.28	0.22	0.22	0.44	0.9517	0.0022	0.9978	1.9904	1713	1671	3384	10052412	10145725	8326308	8543426	300	37068171	0.27	0.25	0.23	0.25	0.48	0.9222	0.1125	0.8976	1.9861	150906	1516	1378	2894	1254164	984596	1350333	1425062	5014155	0.26	0.21	0.25	0.27	0.53	0.8809	0.2705	0.7799	1.9547	0	4733025	5077466	3804645	3808223	200	17423559	0.26	0.33	0.21	0.2	0	0.41	0.8764	0.3131	0.7507	1.9304	0	104	132	236	79988	74398	63173	67588	285147	0.29	0.26	0.22	0.23	0	0.45	0.8826	0.2587	0.7872	1.9578	208280	215328	166980	167279	0	757867	0.28	0.36	0.18	0.18	0	0.37	0.8652	0.3015	0.7599	1.8993	0	70	46	116	1628	1991	2221	2661	8501	0.2	0.24	0.25	0.31	0.57	0.8915	0.2285	0.8046	1.9662	71	71	2272	1917	2059	2201	8449	0.27	0.23	0.24	0.26	0	0.5	0.887	0.1181	0.8896	1.997	31092	41281	17040	15566	37028	39386	28612	18777	22759	25763	20853	39136	19256	40984	17670	37270	13248	39529	27309	18963	47740	25869	19730	33561	41937	29412	13975	18657	11537	29507	36185	14119	21454	13804	25219	33139	28214	17185	27567	34224	38084	32382	31394	35101	28411	18655	18075	16868	17047	21250	36703	39437	9982	13466	17766	26314	5290	36013	40990	22205	31623	7251	15433	33551
GCF_017562075.2	NC_054084	NC_054084.1	Anopheles merus strain MAF chromosome 3R; AmerM5.1; whole genome shotgun sequence.	14080885	14048600	11084783	11099529	3000	50316797	0.28	0.28	0.22	0.22	0.44	0.9604	0.0018	0.9982	1.9899	1381	1332	2713	9335522	9485020	7617354	7884755	900	34323551	0.27	0.25	0.23	0.25	0.48	0.9241	0.1063	0.9027	1.9875	25845	1272	1168	2440	1123709	903351	1214443	1288324	4529827	0.26	0.21	0.25	0.27	0.53	0.8833	0.2647	0.7845	1.9574	35	4317439	4628134	3412642	3465210	500	15823925	0.26	0.33	0.21	0.2	0	0.41	0.877	0.3176	0.748	1.9298	0	73	101	174	59758	53683	45625	47217	206283	0.29	0.26	0.22	0.23	0	0.45	0.8837	0.2482	0.7933	1.9597	257215	268651	199172	203672	100	928810	0.29	0.34	0.19	0.18	0	0.37	0.8728	0.2517	0.7952	1.9061	0	25	31	56	756	935	1055	1341	4087	0.19	0.23	0.26	0.33	0.59	0.8855	0.2426	0.7919	1.9586	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	28161	36779	15571	14565	32967	35253	25807	16957	20697	24604	18888	34539	18098	36399	16170	33687	12117	36341	24979	16964	43291	23451	18558	30595	36627	25617	12446	17197	10736	26456	33485	12953	20310	12299	22881	28420	26117	15329	26197	30018	33434	29126	27113	31530	26275	17191	17012	14945	16196	19642	33045	34512	8645	12016	15935	23276	4834	33473	35808	20145	27441	6774	15351	30522
GCF_017562075.2	NC_054085	NC_054085.1	Anopheles merus strain MAF chromosome 3L; AmerM5.1; whole genome shotgun sequence.	11207917	11176750	8797699	8774091	3700	39960157	0.28	0.28	0.22	0.22	0.44	0.9572	0.0027	0.9973	1.9895	1114	1232	2346	7217920	7308681	5910839	6122376	500	26560316	0.27	0.25	0.23	0.25	0.48	0.9228	0.1142	0.8965	1.9856	25142	999	1065	2064	925225	737842	1017224	1088072	3768363	0.26	0.21	0.26	0.28	0.53	0.8821	0.2652	0.7842	1.9552	2	3087703	3303513	2431819	2458182	400	11281617	0.26	0.33	0.21	0.2	0	0.41	0.8754	0.3123	0.7517	1.9278	4020	70	79	149	59079	57036	47304	50871	214290	0.28	0.26	0.22	0.23	0	0.46	0.8859	0.2413	0.7987	1.9632	251640	268082	199653	205915	0	925290	0.28	0.34	0.19	0.19	0	0.38	0.8761	0.2855	0.77	1.918	0	36	55	91	1230	1594	1681	2176	6681	0.18	0.24	0.25	0.33	0.58	0.8854	0.2887	0.7567	1.9592	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	23168	31382	12055	11846	27186	31575	21564	13500	17260	19269	15072	28769	13885	30542	12901	27910	9603	30945	20609	14261	37739	19872	15593	26065	31511	21352	9735	13331	8845	22461	27252	10382	16251	9828	17537	25787	21694	12873	21166	25609	28225	25331	22478	27924	22406	13623	14822	11682	13490	16000	27283	30484	7166	10060	12754	18751	3599	28571	30827	16125	22765	5018	11373	24764
NA	NC_028220	NC_028220.1	Anopheles merus voucher AMER20150811V3 mitochondrion; complete genome.	6161	5760	2001	1443	0	15365	0.4	0.37	0.13	0.09	0.22	0.8884	0.1957	0.828	1.7628	22	15	37	5013	6416	1569	1849	0	14847	0.37	0.41	0.1	0.12	0.22	0.8373	0.2786	0.7718	1.7364	76	1	2	3	868	1246	255	355	2724	0.31	0.47	0.1	0.12	0.22	0.8418	0.4338	0.6493	1.7166	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	13	9	22	576	579	141	182	1478	0.39	0.39	0.1	0.12	0.22	0.8319	0.2511	0.7954	1.7358	2	2	840	932	144	265	2181	0.38	0.43	0.07	0.12	0	0.19	0.8145	0.3434	0.7249	1.6896	11	9	23	30	11	1	27	61	1	1	50	16	19	0	19	1	28	3	8	76	2	19	0	14	3	0	2	5	43	19	0	7	1	61	15	2	0	0	0	1	1	0	12	2	2	29	7	22	13	14	1	1	145	19	0	4	0	2	1	1	16	3	17	7