GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	fr_chromo_N Frequency of 'N' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	fr_gene_N Frequency of 'N' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_N Number of 'N' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_N Number of 'N' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_N Number of 'N' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_000004555.2	NC_013489	NC_013489.2	Caenorhabditis briggsae complete genome; chrI chromosome; whole genome shotgun sequence.	4674815	4685612	2814496	2823698	457358	15455979	0.3	0.3	0.18	0.18	0.03	0.36	0.942	0.0028	0.9972	1.9393	1596	1614	3210	2834128	2668181	1735595	1803384	190324	9231612	0.31	0.28	0.2	0.21	0.01	0.4	0.9033	0.1494	0.8694	1.9501	4175	1509	1534	3043	1182310	977019	846872	898781	1513	3906495	0.3	0.25	0.21	0.23	0.44	0.8725	0.3115	0.7504	1.948	1563807	1607603	833119	847520	173356	5025405	0.32	0.36	0.15	0.17	0.01	0.32	0.8299	0.3134	0.753	1.8526	4806	3	1	4	122	145	78	106	451	0.27	0.32	0.17	0.24	0.41	0.8885	0.2384	0.7894	1.9649	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	52	66	118	1570	2055	2364	2900	0	8889	0.18	0.23	0.26	0.33	0.59	0.8851	0.2519	0.7842	1.957	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	32004	34893	10231	19554	18065	30579	21674	31719	18564	21165	33030	47530	26287	16274	16551	24669	23872	18090	31464	24400	19312	11321	21093	35779	21038	14235	11759	25383	18018	33961	28207	19675	18715	13228	22334	20988	15475	7853	14121	14726	14286	9386	46598	10015	14320	22389	7036	29104	16835	19979	21964	11409	10257	10940	11780	26962	4512	10188	13829	14480	34521	7457	18189	22432
GCF_000004555.2	NC_013486	NC_013486.2	Caenorhabditis briggsae complete genome; chrII chromosome; whole genome shotgun sequence.	5014506	5039234	3007279	2999594	566541	16627154	0.3	0.3	0.18	0.18	0.03	0.36	0.9385	0.0037	0.9963	1.9354	1733	1714	3447	2915212	2791439	1805618	1841131	269665	9623065	0.3	0.29	0.2	0.2	0.01	0.4	0.9015	0.1434	0.8731	1.9496	88300	1640	1631	3271	1171843	987113	844949	870232	4836	3878973	0.3	0.26	0.22	0.22	0.44	0.8704	0.313	0.7486	1.9468	1575481	1638174	857539	868671	229438	5169303	0.32	0.36	0.15	0.17	0.01	0.32	0.8308	0.3128	0.7533	1.8541	5353	3	2	5	144	168	102	140	554	0.26	0.3	0.18	0.25	0.44	0.8834	0.2378	0.7953	1.9743	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	50	48	98	1335	1762	1902	2357	2	7358	0.18	0.24	0.26	0.32	0.58	0.8865	0.266	0.7758	1.96	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	31973	33176	9962	19979	17379	28645	20706	32195	19013	20835	34564	46246	27215	15033	16144	24436	24806	17064	32694	25975	19364	10797	21968	32988	21716	15152	12230	25763	18263	33365	29622	20356	18309	13277	21918	19819	15121	7976	14291	14482	14172	8748	45292	9491	14215	21790	6861	29923	17249	19907	20599	10172	10664	10785	11556	27600	4816	9845	13351	13518	34669	7544	17955	20856
GCF_000004555.2	NC_013490	NC_013490.2	Caenorhabditis briggsae complete genome; chrIII chromosome; whole genome shotgun sequence.	4425093	4435169	2660000	2650645	407944	14578851	0.3	0.3	0.18	0.18	0.03	0.36	0.9388	0.0029	0.9971	1.9394	1496	1518	3014	2603911	2447022	1596438	1649709	161987	8459067	0.31	0.28	0.2	0.21	0.01	0.4	0.9023	0.1515	0.8682	1.9488	10033	1409	1441	2850	1103398	915619	792631	835199	6823	3653670	0.3	0.25	0.22	0.23	0.44	0.8725	0.3083	0.752	1.9495	1431835	1463582	760723	771924	150317	4578381	0.32	0.36	0.15	0.17	0.01	0.32	0.8287	0.3112	0.7544	1.8511	3215	4	0	4	131	134	78	97	440	0.3	0.31	0.18	0.22	0.4	0.8415	0.1642	0.8518	1.952	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	50	58	108	1563	1937	2027	2613	0	8140	0.19	0.24	0.25	0.32	0.57	0.8915	0.268	0.7751	1.9591	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	29645	31059	9738	18847	16475	27981	20225	30098	17876	19586	31604	44514	24776	14719	15404	22356	22288	17008	29090	22914	18339	10654	19332	33636	19501	13743	11363	23579	16598	33530	27035	18934	17091	12348	20932	18746	13982	7838	12966	13682	13528	8297	42919	9304	13323	20758	6396	27202	15705	18834	19861	10650	9706	10268	10683	26626	4392	9501	12755	13147	32450	7223	16953	20602
GCF_000004555.2	NC_013487	NC_013487.2	Caenorhabditis briggsae complete genome; chrIV chromosome; whole genome shotgun sequence.	5341252	5340787	3129458	3132848	541094	17485439	0.31	0.31	0.18	0.18	0.03	0.36	0.9448	0.0006	0.9994	1.9339	1704	1710	3414	2942735	2830082	1791172	1836900	236812	9637701	0.3	0.29	0.2	0.2	0.01	0.4	0.9033	0.1416	0.8755	1.9488	20	1610	1621	3231	1157120	993498	830417	865171	11653	3857859	0.3	0.26	0.21	0.22	0.44	0.8723	0.3065	0.7531	1.9469	1672352	1722216	890582	900943	200597	5386690	0.32	0.36	0.15	0.17	0.01	0.32	0.8328	0.3052	0.7592	1.8534	0	1	2	3	49	53	53	55	210	0.23	0.25	0.25	0.26	0.52	0.9005	0.1706	0.8434	1.986	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	68	56	124	1634	2137	2344	2944	0	9059	0.18	0.24	0.26	0.33	0.58	0.8863	0.2718	0.7686	1.9599	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	31993	32670	10374	20054	17126	28028	20819	32917	18674	21385	33402	44482	26072	14809	16317	24240	23849	17853	32181	26996	19420	11218	20601	33729	19890	14633	12527	26304	19347	35291	28101	20340	17670	13800	22099	19215	15042	8186	14774	14129	13659	8239	44001	9200	14149	22532	6676	27962	17495	20272	19827	9684	11339	10923	11490	28465	4710	9537	12935	13373	34177	7776	17964	20106
GCF_000004555.2	NC_013488	NC_013488.2	Caenorhabditis briggsae complete genome; chrV chromosome; whole genome shotgun sequence.	5944973	5952440	3554042	3563651	480051	19495157	0.3	0.31	0.18	0.18	0.02	0.37	0.947	0.002	0.998	1.9409	2502	2457	4959	3367864	3315294	2103021	2138291	165144	11089614	0.3	0.29	0.2	0.2	0.01	0.4	0.9021	0.1457	0.8719	1.9495	15906	2374	2343	4717	1568730	1428236	1109396	1133907	5126	5245395	0.3	0.28	0.21	0.21	0.42	0.8717	0.2961	0.7599	1.9434	1598979	1682817	872095	882604	135020	5171515	0.32	0.36	0.15	0.17	0	0.32	0.8259	0.3294	0.7417	1.8485	0	3	3	6	104	111	88	90	393	0.27	0.28	0.23	0.23	0.45	0.8811	0.1479	0.8664	1.9826	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	63	72	135	1786	2332	2552	3215	1	9886	0.18	0.24	0.26	0.33	0.58	0.8892	0.2564	0.782	1.9589	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	43554	41374	15246	29322	23168	34808	28955	49556	24961	28773	46814	58498	35585	17695	22589	32754	34017	23714	46685	45308	25713	15327	27030	43913	25551	20534	18362	37448	29781	45067	39134	29964	23494	21099	30157	24897	19535	10174	21623	18326	18135	10091	60778	11663	20231	32091	9012	35963	25940	28167	24800	12346	18460	15064	13328	36605	6694	12091	15752	15826	45998	11187	24057	24990
GCF_000004555.2	NC_013491	NC_013491.2	Caenorhabditis briggsae complete genome; chrX chromosome; whole genome shotgun sequence.	6597031	6613637	3953736	3955488	420678	21540570	0.31	0.31	0.18	0.18	0.02	0.37	0.9497	0.0015	0.9985	1.9438	1952	1994	3946	3058749	2906532	1932827	1921183	101489	9920780	0.3	0.29	0.2	0.2	0	0.4	0.9053	0.1401	0.8773	1.9551	4969	1836	1886	3722	1325021	1094226	986941	968440	5525	4380153	0.3	0.26	0.22	0.22	0.44	0.8727	0.3099	0.7505	1.9501	1680450	1758125	907060	917099	92285	5355019	0.32	0.36	0.15	0.17	0	0.32	0.8309	0.3297	0.7419	1.8541	0	2	4	6	171	187	147	168	673	0.25	0.28	0.22	0.25	0.47	0.9135	0.1115	0.8957	1.9938	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	88	88	176	2319	3143	3334	4175	0	12971	0.18	0.24	0.26	0.32	0.58	0.8869	0.2761	0.7685	1.958	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	36267	36958	11234	24027	20820	32859	24350	34370	21011	22712	35062	47748	29892	16123	18247	32870	24935	19818	34654	28997	21146	12240	24599	34112	24050	20007	14009	29357	19985	35110	31863	24251	20690	14987	27093	24009	20061	9274	18102	17346	18619	11566	49603	10357	18344	24735	7380	31022	19185	23305	19958	11313	12260	12215	12711	34157	5405	11123	14935	14942	43790	8454	20290	20933