GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	fr_cds_N Frequency of 'N' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_000002985.6	NC_003279	NC_003279.8	Caenorhabditis elegans chromosome I.	4835939	4848450	2695890	2692155	15072434	0.32	0.32	0.18	0.18	0.36	0.938	0.002	0.998	1.9406	2034	1981	4015	3541084	3463969	1981237	2004083	10990373	0.31	0.3	0.19	0.2	0.39	0.8894	0.1723	0.8561	1.9334	13068	1490	1409	2899	1199331	1013090	813209	875815	3901445	0.31	0.26	0.21	0.22	0	0.43	0.8731	0.2958	0.7604	1.9477	1	1959920	1997301	931293	929487	5818001	0.34	0.37	0.14	0.15	0	0.29	0.8239	0.2871	0.771	1.8276	0	450	532	982	43095	43276	29792	31355	147518	0.29	0.29	0.2	0.22	0	0.42	0.8349	0.4041	0.6953	1.8943	542	5312	5256	2231	2409	15208	0.33	0.38	0.14	0.15	0	0.29	0.8405	0.2151	0.8192	1.8403	49	35	31	66	884	1117	1324	1606	4931	0.18	0.23	0.27	0.33	0.59	0.8837	0.2304	0.8004	1.958	5	5	1821	1965	1510	1986	7282	0.24	0.27	0.21	0.27	0	0.48	0.9082	0.1834	0.8347	1.9916	33187	34311	11195	20373	20854	27319	22170	36385	16165	20737	36794	47905	29052	14553	16517	22668	21742	18205	29523	26534	18054	11134	20067	36924	19255	12515	10965	26849	20145	31969	26647	22161	15883	15094	24133	18516	15696	6476	13986	13875	15340	8278	47517	9710	15940	23412	6372	26320	17982	20321	19911	9751	13405	10113	10395	24703	4529	10169	13351	14316	35822	9071	20757	21160
GCF_000002985.6	NC_003280	NC_003280.10	Caenorhabditis elegans chromosome II.	4878209	4869734	2769232	2762246	15279421	0.32	0.32	0.18	0.18	0.36	0.9434	0.0021	0.9979	1.9443	2470	2422	4892	3165748	3127746	1853803	1853275	10000572	0.31	0.3	0.19	0.2	0.39	0.8912	0.1793	0.8493	1.9385	29538	1761	1711	3472	1238867	1080577	861533	902177	4083154	0.3	0.27	0.21	0.22	0	0.43	0.8739	0.2863	0.7662	1.9491	210	1511520	1561278	741390	734543	4548731	0.33	0.38	0.14	0.15	0	0.29	0.8179	0.3143	0.7516	1.8224	1960	647	662	1309	62294	61633	41507	44464	209898	0.29	0.29	0.2	0.22	0	0.42	0.8475	0.3904	0.7001	1.9082	377	8835	9057	4251	4527	26670	0.33	0.37	0.14	0.16	0	0.3	0.8164	0.2902	0.7692	1.843	0	25	32	57	761	991	1111	1387	4250	0.18	0.23	0.26	0.33	0.59	0.8878	0.2599	0.7802	1.957	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	34180	33770	11788	22043	20832	27442	22715	38153	17811	21527	37913	45319	30170	14856	17887	24531	22776	18441	32402	30938	20553	11357	21434	35091	20800	14344	13161	28451	22256	33032	27759	23446	16566	16638	24895	18749	16406	7516	15830	14371	16138	8606	47990	10353	17178	24273	7107	27321	19486	21376	20031	9783	14490	11089	11295	25671	5366	10916	13990	13658	37157	10276	22150	21565
GCF_000002985.6	NC_003281	NC_003281.10	Caenorhabditis elegans chromosome III.	4444681	4423618	2449158	2466344	13783801	0.32	0.32	0.18	0.18	0.36	0.9377	0.0059	0.9941	1.9398	1846	1835	3681	3153661	3091759	1783422	1788987	9817829	0.31	0.3	0.19	0.2	0.38	0.8907	0.1705	0.8578	1.9345	30595	1358	1317	2675	1077090	913245	739697	789898	3519930	0.31	0.26	0.21	0.22	0	0.43	0.8738	0.2936	0.7616	1.9493	0	1706662	1735481	814396	808639	5065178	0.34	0.37	0.14	0.15	0	0.29	0.8234	0.283	0.7734	1.8251	0	449	471	920	43424	42666	29000	30555	145645	0.29	0.29	0.2	0.22	0	0.42	0.8398	0.3927	0.7038	1.9025	363	8726	8643	4324	4558	26251	0.34	0.36	0.14	0.16	0	0.3	0.8441	0.2357	0.8022	1.8546	0	29	35	64	890	1120	1214	1553	4777	0.19	0.23	0.25	0.33	0.58	0.8842	0.2739	0.7716	1.9567	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	29492	29445	10173	18368	18470	24329	20088	32533	15002	18640	33349	42275	26407	13204	14989	20313	19631	16364	26646	24331	16449	10057	18555	33274	17838	11513	10103	23826	18160	30365	23788	20135	14290	13521	21712	16312	14264	6265	12525	12502	14030	7463	42349	8983	14394	21231	5582	23952	16167	17938	17826	8879	11738	9195	9202	22862	4042	9521	12446	12398	32516	8319	18680	19387
GCF_000002985.6	NC_003282	NC_003282.8	Caenorhabditis elegans chromosome IV.	5711043	5730974	3034784	3017028	17493829	0.33	0.33	0.17	0.17	0.35	0.9438	0.0047	0.9953	1.9304	9670	9653	19323	3556283	3557694	1976778	1985006	11075761	0.3	0.36	0.17	0.17	0.34	0.8343	0.4935	0.6517	1.8186	81653	1847	1572	3419	1204428	1055888	818308	861084	3939708	0.31	0.27	0.21	0.22	0	0.42	0.872	0.292	0.763	1.9435	87	1863564	1919448	875222	872245	5530479	0.34	0.37	0.14	0.15	0	0.29	0.8244	0.2858	0.7716	1.8244	0	7854	8054	15908	152136	177799	89970	93814	513719	0.3	0.37	0.16	0.17	0	0.33	0.817	0.5874	0.5908	1.7891	63684	14558	15733	7561	8047	45899	0.32	0.38	0.14	0.16	0	0.3	0.8376	0.2516	0.7913	1.8483	0	41	30	71	922	1268	1354	1686	5230	0.18	0.24	0.26	0.32	0.58	0.8841	0.2793	0.763	1.9605	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	33852	32487	11911	21948	20549	25366	22076	38267	16395	20915	37746	44576	29610	13809	16535	23693	22298	17827	31217	30767	19016	11397	19967	35224	19501	12609	11720	28511	21996	34321	26067	23383	16298	16587	25139	17489	15701	6640	14966	13241	14157	7565	46986	9234	16061	24564	6240	25843	18799	20951	18928	8608	14599	10258	10212	26781	4679	9502	12908	13727	37276	9429	19905	18857
GCF_000002985.6	NC_003283	NC_003283.11	Caenorhabditis elegans chromosome V.	6750403	6760297	3712075	3701405	20924180	0.32	0.32	0.18	0.18	0.35	0.9464	0.0022	0.9978	1.9379	3447	3557	7004	4111740	4137574	2356844	2362311	12968469	0.31	0.31	0.19	0.19	0.38	0.8897	0.1767	0.8516	1.9327	21448	2520	2524	5044	1686530	1564564	1135304	1166308	5552706	0.3	0.29	0.2	0.21	0	0.41	0.8727	0.2835	0.7682	1.9412	463	1881129	1953201	901893	912214	5648437	0.34	0.38	0.14	0.15	0	0.29	0.8192	0.3119	0.7539	1.8236	0	864	975	1839	81939	80083	55714	60565	278301	0.3	0.29	0.2	0.22	0	0.42	0.8448	0.3786	0.7091	1.9075	259	13856	13873	6397	6687	40813	0.34	0.36	0.15	0.16	0	0.3	0.8392	0.2586	0.7885	1.851	0	32	46	78	1033	1337	1464	1899	5733	0.18	0.23	0.25	0.33	0.59	0.8861	0.2665	0.7762	1.9555	15	15	416	433	434	461	1744	0.24	0.25	0.25	0.26	0	0.51	0.8921	0.0897	0.9152	1.9975	46890	41136	17479	32402	29216	31103	30380	58457	22966	29450	53479	59214	41347	18060	24549	33921	32650	24619	46317	54015	26436	15704	26079	44681	25413	18362	19325	41736	34935	43406	36681	34489	21257	26893	35785	23582	20930	9440	23646	18078	19913	10075	67630	13277	24869	35676	9498	33883	28500	29811	23369	12223	24630	14962	12872	34342	7433	12771	16598	16495	51739	14693	28426	24978
GCF_000002985.6	NC_003284	NC_003284.9	Caenorhabditis elegans chromosome X.	5747200	5734092	3119741	3117909	17718942	0.32	0.32	0.18	0.18	0.35	0.9481	0.0014	0.9986	1.9359	3002	2842	5844	3263234	3259675	1897589	1858877	10279375	0.3	0.29	0.2	0.21	0.41	0.8842	0.2236	0.818	1.9353	21718	1453	1362	2815	1079592	912934	763299	761942	3517767	0.31	0.26	0.21	0.22	0	0.43	0.8732	0.296	0.7595	1.9487	104	1609667	1689288	770656	780707	4850318	0.33	0.37	0.14	0.15	0	0.29	0.8242	0.3094	0.7557	1.8302	0	1343	1345	2688	127967	121660	90747	95737	436111	0.29	0.28	0.21	0.22	0	0.43	0.8574	0.3564	0.7224	1.9254	78	10130	10180	4411	4862	29583	0.33	0.37	0.14	0.16	0	0.3	0.8359	0.2818	0.7739	1.8414	0	136	140	276	3707	4866	5280	6569	20422	0.18	0.24	0.26	0.32	0.58	0.8874	0.2596	0.78	1.9608	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	29203	27937	10438	19844	19956	22742	19084	31361	14829	17911	30090	38655	25351	12901	15435	25944	18906	15961	25772	27430	16675	10005	17464	27468	18681	13846	10940	25363	17309	26537	22430	21082	14378	13847	24205	18372	15963	6736	15058	12583	14776	8472	42176	8392	16268	21992	5963	22069	16078	19076	14031	8677	13032	9548	8709	24746	4740	8688	11588	11564	36503	8089	17015	15976
NA	NC_001328	NC_001328.1	Caenorhabditis elegans mitochondrion; complete genome.	4335	6179	1225	2055	13794	0.31	0.45	0.09	0.15	0.24	0.8807	0.4284	0.6488	1.7632	36	0	36	4077	5884	1201	2026	13188	0.33	0.42	0.09	0.16	0.25	0.7868	0.4497	0.6545	1.7676	7	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	22	0	22	435	484	111	209	1239	0.35	0.39	0.09	0.17	0.26	0.747	0.4244	0.6773	1.7837	2	2	598	669	140	243	1650	0.36	0.4	0.09	0.15	0	0.24	0.8431	0.3199	0.74	1.7717	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0