GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	fr_chromo_N Frequency of 'N' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	fr_gene_N Frequency of 'N' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_N Number of 'N' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_N Number of 'N' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_N Number of 'N' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_N Number of 'N' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_N Number of 'N' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_000224145.3	NC_020166	NC_020166.2	Ciona intestinalis chromosome 1; KH; whole genome shotgun sequence.	3137234	3127533	1719729	1707952	348557	10041005	0.31	0.31	0.17	0.17	0.03	0.34	0.9449	0.005	0.995	1.9192	674	720	1394	2707670	2776770	1479826	1515393	70592	8550251	0.31	0.32	0.18	0.19	0	0.36	0.9118	0.0933	0.9142	1.9314	45996	543	603	1146	583243	478068	377945	405999	12	1845267	0.32	0.26	0.2	0.22	0.42	0.8702	0.3128	0.7488	1.9425	0	1490145	1627415	757246	761834	57297	4693937	0.32	0.36	0.15	0.16	0	0.31	0.8653	0.1976	0.8313	1.8683	0	88	80	168	35559	34380	20303	21017	0	111259	0.32	0.29	0.19	0.2	0	0.39	0.8604	0.3374	0.7391	1.8975	176	95505	97963	51525	52352	3368	300713	0.32	0.36	0.15	0.17	0	0.31	0.8635	0.2255	0.8129	1.8706	24	23	47	644	783	903	1124	0	3454	0.19	0.23	0.26	0.33	0.59	0.8935	0.2391	0.7931	1.9616	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	16185	15806	7242	10324	11546	9864	9362	13504	6297	9935	14308	20000	12344	6866	9088	14911	8778	10461	10237	13504	9562	7892	6270	13952	10445	8104	5852	13477	9387	10750	9408	11376	6214	9977	15042	8769	8545	4661	8426	4811	7429	3375	23959	4711	7404	13307	5237	11702	9333	10275	6004	4722	10698	6483	5655	11156	2856	3746	4287	5295	18684	6260	8832	7013
GCF_000224145.3	NC_020167	NC_020167.2	Ciona intestinalis chromosome 2; KH; whole genome shotgun sequence.	2401201	2408174	1334723	1334483	280344	7758925	0.31	0.31	0.17	0.17	0.04	0.34	0.948	0.0015	0.9985	1.9212	592	546	1138	2154678	2224522	1199822	1230761	68444	6878227	0.31	0.32	0.18	0.19	0	0.36	0.9133	0.0936	0.9139	1.9333	25114	483	486	969	519289	436398	340330	365564	13	1661594	0.31	0.26	0.2	0.22	0.42	0.8712	0.3016	0.7558	1.9456	0	1162828	1287445	596668	598346	35063	3680350	0.32	0.37	0.15	0.16	0	0.31	0.8619	0.2118	0.8205	1.8646	0	50	45	95	16739	16306	9682	10624	0	53351	0.33	0.29	0.18	0.21	0	0.39	0.8552	0.3541	0.7324	1.8968	0	52672	52453	28535	28413	2491	164564	0.32	0.36	0.16	0.16	0	0.32	0.8704	0.1942	0.8358	1.8816	38	9	47	599	837	923	1098	0	3457	0.17	0.24	0.27	0.32	0.58	0.8733	0.2685	0.7743	1.9576	0	1	0	1	25	26	31	37	119	0.21	0.22	0.26	0.31	0	0.57	0.9044	0.1078	0.8997	1.9819	13873	14196	6510	9170	10197	8937	7945	12219	6069	9337	13027	18032	11297	5976	8289	12950	8147	9445	9705	12606	8721	7304	5934	12599	9344	7300	5187	12233	8304	9550	8913	10573	5833	8590	13088	7759	7462	4125	7223	4152	6775	3166	21214	4153	7122	12054	4412	10400	8845	9523	5457	3985	9281	5921	5028	9860	2682	3426	3905	4977	16228	5777	8388	6234
GCF_000224145.3	NC_020168	NC_020168.2	Ciona intestinalis chromosome 3; KH; whole genome shotgun sequence.	2102172	2088006	1154473	1152060	207278	6703989	0.31	0.31	0.17	0.17	0.03	0.34	0.9464	0.0044	0.9956	1.9224	487	485	972	1814109	1862350	988553	1026571	54383	5745966	0.31	0.32	0.18	0.19	0	0.37	0.9121	0.0966	0.9115	1.935	52922	399	409	808	457343	373237	290915	318858	1	1440354	0.32	0.26	0.2	0.22	0.42	0.8709	0.3033	0.7545	1.9442	2	1011295	1118199	505890	512295	45375	3193054	0.32	0.37	0.15	0.16	0	0.3	0.8613	0.2106	0.8215	1.8621	1628	54	25	79	18322	18194	10749	11691	0	58956	0.32	0.29	0.19	0.21	0	0.39	0.8671	0.3146	0.7587	1.9111	0	32645	34525	18857	18250	420	104697	0.31	0.36	0.16	0.17	0.01	0.33	0.8678	0.211	0.8238	1.8844	21	36	57	748	993	1108	1297	0	4146	0.18	0.24	0.27	0.31	0.58	0.8806	0.2278	0.8055	1.965	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	12318	12651	5542	7834	8923	8198	7337	10400	5153	7499	11175	16686	9709	5175	7021	11329	6833	7986	8004	10663	7327	5958	4938	11858	8327	6144	4381	10788	7081	8419	7403	9064	4893	7632	11072	6965	6191	3276	6281	3696	5899	2639	19024	3450	5896	10387	3967	9382	7242	8090	4697	3403	8179	4965	4649	8371	2132	2894	3294	4326	14653	4972	7282	5734
GCF_000224145.3	NC_020169	NC_020169.2	Ciona intestinalis chromosome 4; KH; whole genome shotgun sequence.	1734465	1732656	953534	954751	130342	5505748	0.32	0.31	0.17	0.17	0.02	0.35	0.9472	0.0012	0.9988	1.9263	394	411	805	1558026	1590476	856901	872996	47539	4925938	0.32	0.32	0.17	0.18	0.01	0.36	0.9139	0.0857	0.9201	1.932	29135	341	353	694	390448	322823	252564	267862	41	1233738	0.32	0.26	0.2	0.22	0.42	0.8704	0.3068	0.7524	1.9434	0	809417	890031	406007	406244	30578	2542277	0.33	0.37	0.15	0.15	0	0.3	0.8595	0.2116	0.8206	1.8597	0	32	39	71	16665	15155	9582	9940	1	51343	0.33	0.28	0.18	0.2	0	0.38	0.8614	0.3415	0.7417	1.8944	0	40928	41439	22594	22530	650	128141	0.32	0.36	0.15	0.16	0	0.32	0.8639	0.2117	0.821	1.8764	3	10	13	144	227	250	335	0	956	0.15	0.24	0.26	0.35	0.61	0.8937	0.3706	0.6912	1.9378	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	10556	10424	5240	6965	7866	6686	6393	9095	4473	6668	9686	13347	8221	4091	6129	9782	6010	6910	6713	9324	6865	5222	4265	9356	7270	5512	4192	8911	6454	6840	6266	7524	4108	6857	10443	5702	5539	2857	5776	3227	5140	2145	15885	3128	5195	8815	3082	7743	6267	7138	3615	2857	7245	4508	3686	7589	2053	2396	2667	3469	12280	4346	5783	4415
GCF_000224145.3	NC_020170	NC_020170.2	Ciona intestinalis chromosome 5; KH; whole genome shotgun sequence.	1619687	1620528	871921	867333	56501	5035970	0.32	0.32	0.17	0.17	0.01	0.35	0.9451	0.0029	0.9971	1.9278	334	353	687	1429825	1468163	764164	784299	18140	4464591	0.32	0.32	0.17	0.18	0	0.35	0.9123	0.0882	0.9185	1.9301	16055	279	299	578	325094	267897	209249	223952	15	1026207	0.32	0.26	0.2	0.22	0.42	0.8699	0.3046	0.7535	1.9419	0	770278	846382	374984	378681	12991	2383316	0.33	0.37	0.15	0.15	0	0.3	0.8642	0.1939	0.834	1.8596	0	33	33	66	12081	11735	7065	6965	1	37847	0.32	0.29	0.19	0.21	0	0.39	0.8564	0.3452	0.7347	1.8944	0	33740	32778	17692	17473	575	102258	0.33	0.35	0.15	0.16	0.01	0.32	0.8709	0.2092	0.8282	1.8754	1	1	2	27	36	36	45	0	144	0.19	0.25	0.25	0.31	0.56	0.9043	0.2544	0.7822	1.9665	0	0	3	3	77	74	97	109	357	0.22	0.21	0.27	0.31	0	0.58	0.8987	0.0781	0.9258	1.9811	8671	8695	4121	5771	6248	5567	4979	7697	3690	5804	7947	11020	6828	3376	5045	8313	5007	5687	5770	7747	5460	4409	3627	7731	5872	4518	3306	7465	5155	5958	5442	6274	3440	5453	8404	4656	4748	2508	4747	2591	4223	1777	13542	2657	4257	7315	2681	6810	5256	5859	3089	2365	5993	3584	3179	6267	1711	2070	2335	2878	10236	3648	5149	3648
GCF_000224145.3	NC_020171	NC_020171.2	Ciona intestinalis chromosome 6; KH; whole genome shotgun sequence.	755979	753037	410978	412178	33539	2365711	0.32	0.32	0.17	0.17	0.01	0.35	0.9403	0.0034	0.9966	1.9295	158	171	329	712320	727807	391390	397676	18761	2247954	0.31	0.32	0.18	0.19	0	0.37	0.914	0.0816	0.9243	1.9381	5698	128	128	256	130425	106608	84509	89021	0	410563	0.32	0.26	0.2	0.22	0.42	0.87	0.3091	0.7503	1.9405	0	359351	386698	187514	187472	3128	1124163	0.32	0.36	0.16	0.16	0	0.32	0.8691	0.1872	0.839	1.8814	0	17	21	38	8120	8477	5123	5533	1	27254	0.3	0.28	0.2	0.22	0	0.42	0.8674	0.297	0.7672	1.9306	20	44654	46072	23810	23676	264	138476	0.31	0.35	0.15	0.18	0	0.33	0.8719	0.2368	0.8108	1.8792	5	16	21	295	371	403	496	0	1565	0.19	0.24	0.26	0.32	0.57	0.8987	0.2382	0.7917	1.969	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3486	3250	1937	2329	2415	2073	1980	2958	1199	2065	3254	4208	2532	1665	1890	3503	1873	2321	2214	3220	2323	1592	1297	2696	2408	1774	1669	2836	2312	2166	1993	2454	1495	2506	3277	2273	1885	1244	2050	1187	1730	779	5499	1093	1684	2816	1276	2571	2089	2231	1220	1164	2577	1394	1236	2286	815	791	919	1222	4108	1578	1756	1521
GCF_000224145.3	NC_020172	NC_020172.2	Ciona intestinalis chromosome 7; KH; whole genome shotgun sequence.	1934727	1949755	1054947	1065893	119887	6125209	0.32	0.32	0.17	0.17	0.02	0.35	0.9452	0.009	0.991	1.9269	449	410	859	1691246	1740681	927841	950159	52571	5362498	0.31	0.32	0.18	0.19	0.01	0.36	0.9112	0.0928	0.9147	1.9309	36154	385	313	698	364788	298054	239050	256541	3	1158436	0.32	0.26	0.2	0.22	0.43	0.8697	0.321	0.7427	1.9418	0	945228	1035079	480044	483792	37155	2981298	0.32	0.36	0.15	0.16	0	0.31	0.8661	0.1973	0.8314	1.869	0	40	67	107	11003	10905	6668	6877	2	35455	0.31	0.3	0.19	0.21	0	0.39	0.8534	0.3794	0.7131	1.8994	19	36458	38336	20429	20351	2112	117686	0.32	0.36	0.16	0.16	0.01	0.32	0.8676	0.2048	0.8282	1.8782	12	10	22	302	380	406	521	1	1610	0.19	0.24	0.25	0.32	0.57	0.8956	0.2535	0.7853	1.965	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	9902	9532	4764	6308	7121	6641	5854	8420	4173	5890	8851	12467	7626	4584	5414	9287	5370	6724	6704	8303	5989	5036	4067	8966	6676	5115	3921	8188	5919	7048	5868	7034	4055	6259	9495	5878	5163	3180	5163	3072	4614	2176	14879	2869	4164	8321	3594	7365	5379	6649	3812	3076	6885	4239	3566	6749	1890	2434	2830	3439	11545	3915	5227	4473
GCF_000224145.3	NC_020173	NC_020173.2	Ciona intestinalis chromosome 8; KH; whole genome shotgun sequence.	2016329	2000880	1120835	1118094	142657	6398795	0.32	0.31	0.18	0.17	0.02	0.35	0.9475	0.0051	0.9949	1.9294	411	507	918	1783557	1833595	997129	1014681	49816	5678778	0.32	0.32	0.18	0.18	0	0.36	0.9132	0.0886	0.9181	1.9329	33792	353	448	801	439676	366277	286004	305186	23	1397166	0.32	0.26	0.2	0.22	0.42	0.8707	0.2995	0.7577	1.9439	0	949073	1046262	489262	486832	17777	2989206	0.32	0.37	0.15	0.16	0	0.31	0.8636	0.2048	0.8253	1.8667	0	34	39	73	15823	15133	9236	9601	0	49793	0.31	0.29	0.19	0.21	0	0.39	0.8665	0.3278	0.7492	1.9109	0	45772	48408	27206	26826	5731	153943	0.31	0.35	0.16	0.17	0.01	0.33	0.8709	0.206	0.8271	1.8748	10	6	16	249	288	316	400	0	1253	0.2	0.23	0.25	0.32	0.57	0.8709	0.1961	0.83	1.9717	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	11913	11464	5683	8076	8512	7445	7100	10286	5005	7997	11034	15087	9562	4550	7050	11300	7202	7452	7913	10290	7082	6472	4736	10714	7908	6165	4684	9870	7150	8198	7100	8485	4623	7650	11584	6916	6250	3409	6343	3550	5893	2359	17625	3661	6028	10017	3874	8699	7682	8016	4088	3275	8188	5144	4209	8780	2278	2569	3103	3905	13840	4814	6643	4990
GCF_000224145.3	NC_020174	NC_020174.2	Ciona intestinalis chromosome 9; KH; whole genome shotgun sequence.	2082988	2073115	1170759	1177116	82259	6586237	0.32	0.31	0.18	0.18	0.01	0.36	0.9451	0.0051	0.9949	1.9371	452	414	866	1842759	1878982	1034154	1065001	43465	5864361	0.31	0.32	0.18	0.19	0	0.36	0.9155	0.0864	0.9198	1.9376	29535	385	358	743	434104	350134	284994	308765	20	1378017	0.32	0.26	0.2	0.22	0.43	0.871	0.3188	0.7446	1.9423	0	989774	1082523	510623	518512	30322	3131754	0.32	0.36	0.15	0.16	0	0.31	0.8644	0.2066	0.8245	1.8733	0	37	38	75	13104	13256	8350	8528	0	43238	0.32	0.28	0.19	0.21	0	0.4	0.8609	0.3428	0.7324	1.91	0	34889	36799	20000	19201	254	111143	0.31	0.37	0.15	0.17	0.01	0.32	0.8526	0.2481	0.7993	1.8611	17	7	24	360	418	443	532	0	1753	0.21	0.24	0.25	0.3	0.56	0.8842	0.2005	0.8246	1.9779	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	11252	11649	5133	7301	7955	7585	6641	9676	4860	7673	10125	15235	9114	5550	6847	11281	6381	7511	7701	9520	6890	5912	4692	10302	7449	6415	4310	9958	6880	8398	7342	7845	4817	7233	11061	6854	6222	3874	6078	3694	5823	2778	17684	3529	5604	9939	4158	9116	7012	7371	4679	3701	7735	4660	4638	8314	2171	3316	3467	4306	13873	4737	7110	5958
GCF_000224145.3	NC_020175	NC_020175.2	Ciona intestinalis chromosome 10; KH; whole genome shotgun sequence.	1545041	1556592	842951	844086	92205	4880875	0.32	0.32	0.17	0.17	0.02	0.35	0.9456	0.0044	0.9956	1.9265	334	315	649	1324718	1361884	720409	734341	25854	4167206	0.31	0.32	0.18	0.19	0	0.36	0.9128	0.0917	0.9154	1.9337	12454	271	252	523	295064	244187	192411	207155	3	938820	0.32	0.26	0.2	0.22	0.42	0.8684	0.3105	0.7502	1.9427	38	764204	836672	379365	379269	18921	2378431	0.33	0.37	0.15	0.15	0	0.31	0.8674	0.1893	0.837	1.8666	0	33	52	85	15472	15155	8967	9309	0	48903	0.32	0.29	0.18	0.21	0	0.39	0.8544	0.3371	0.7479	1.8921	0	38744	39992	21533	21410	371	122050	0.31	0.37	0.15	0.17	0	0.32	0.856	0.2281	0.8144	1.8731	23	4	27	378	472	519	666	0	2035	0.19	0.23	0.25	0.33	0.58	0.8469	0.2308	0.8025	1.9652	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8175	7931	3952	5387	6028	5271	4855	6993	3349	4892	6816	10354	6013	3136	4472	7471	4430	5521	5264	6698	5246	3933	3275	7009	5544	4166	3229	6871	4651	5501	4707	5914	3238	5204	7756	4266	4248	2522	4095	2424	3805	1560	11792	2316	3992	6916	2670	6125	4834	5480	2757	2317	5424	3362	2955	5713	1635	1811	2082	2639	9193	3302	4518	3286
GCF_000224145.3	NC_020176	NC_020176.2	Ciona intestinalis chromosome 11; KH; whole genome shotgun sequence.	1628159	1624941	898895	894922	105984	5152901	0.32	0.32	0.17	0.17	0.02	0.35	0.9465	0.0032	0.9968	1.9283	353	385	738	1438804	1471165	789231	813452	45166	4557818	0.32	0.32	0.18	0.19	0	0.36	0.914	0.0877	0.9186	1.9344	20326	300	317	617	326184	269657	216454	233802	4	1046101	0.31	0.26	0.2	0.22	0.43	0.8705	0.3088	0.7511	1.9451	0	773367	843218	388594	393065	29250	2427494	0.32	0.36	0.15	0.16	0	0.31	0.8663	0.1974	0.8307	1.8696	0	37	36	73	15443	14903	9345	9435	0	49126	0.32	0.29	0.19	0.2	0	0.39	0.8684	0.3094	0.7589	1.9156	0	31686	31774	15974	15970	10527	105931	0.31	0.35	0.16	0.17	0.01	0.32	0.864	0.2197	0.8168	1.8763	6	14	20	292	350	358	472	0	1472	0.2	0.24	0.24	0.32	0.56	0.8891	0.2356	0.7926	1.9682	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	9044	8613	4143	5622	6281	5922	5139	7468	3786	5529	7899	11515	6596	4142	4888	8600	4857	5756	5950	7752	5006	4485	3701	8094	5749	4773	3215	7645	5230	6426	5490	6476	3799	5396	8196	5242	4573	3000	4680	2882	4171	2031	13259	2788	4132	7784	3285	6551	5345	5615	3645	3012	6059	3694	3258	6114	1602	2312	2641	3305	10499	3276	4746	4252
GCF_000224145.3	NC_020177	NC_020177.2	Ciona intestinalis chromosome 12; KH; whole genome shotgun sequence.	1664880	1671501	929495	926979	163269	5356124	0.31	0.31	0.17	0.17	0.03	0.35	0.9452	0.0033	0.9967	1.9247	342	364	706	1552713	1584214	864515	878985	84047	4964474	0.31	0.32	0.18	0.19	0.01	0.36	0.9146	0.0865	0.9201	1.9347	15521	272	301	573	305905	251027	204210	217941	5	979088	0.31	0.26	0.2	0.22	0.43	0.8708	0.3088	0.7517	1.9454	0	809353	876808	418893	420824	48490	2574368	0.32	0.36	0.16	0.16	0	0.32	0.8691	0.1884	0.8381	1.8799	0	61	44	105	19734	19532	11901	12521	2	63690	0.32	0.29	0.19	0.2	0	0.39	0.8596	0.3267	0.7464	1.9011	229	62140	63408	35268	34550	2213	197579	0.31	0.36	0.16	0.17	0.01	0.32	0.8628	0.2226	0.8168	1.873	5	6	11	157	192	208	264	0	821	0.19	0.23	0.25	0.32	0.58	0.8737	0.2198	0.8094	1.9693	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8323	8182	3807	5349	5624	5629	4775	7072	3500	5177	7329	10569	6360	3864	4575	7892	4519	5556	5598	7085	5110	4091	3382	7446	5575	4547	3117	7167	4841	5580	5157	5701	3510	5130	7797	4954	4384	3033	4601	2639	3960	1869	12692	2556	3908	7216	3135	6138	4750	5327	3354	2807	5457	3677	3146	5963	1486	2164	2559	2909	9500	3200	4543	3806
GCF_000224145.3	NC_020178	NC_020178.2	Ciona intestinalis chromosome 13; KH; whole genome shotgun sequence.	548496	562354	302206	308110	71513	1792679	0.31	0.31	0.17	0.17	0.04	0.34	0.9358	0.0221	0.9781	1.9171	120	80	200	584352	591919	318440	327488	26522	1848721	0.32	0.32	0.17	0.18	0.01	0.36	0.9113	0.0786	0.9284	1.9302	849	96	70	166	93983	78022	59623	66176	1	297805	0.32	0.26	0.2	0.22	0.42	0.8706	0.308	0.7514	1.9432	0	282406	301575	149463	151894	16399	901737	0.32	0.35	0.16	0.17	0	0.33	0.8682	0.1787	0.8455	1.894	0	23	6	29	4075	3973	2577	2569	3	13197	0.3	0.3	0.19	0.21	0	0.4	0.8508	0.3253	0.7488	1.9183	0	27492	28663	15434	14908	226	86723	0.3	0.34	0.17	0.18	0	0.35	0.8779	0.1774	0.8537	1.9161	1	1	2	29	33	39	45	0	146	0.2	0.23	0.27	0.31	0.58	0.8682	0.1359	0.8778	1.9777	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2594	2435	1250	1657	1668	1594	1421	2231	947	1612	2352	3090	1844	1161	1426	2121	1345	1646	1551	2236	1539	1239	884	2173	1620	1260	1057	1976	1786	1728	1411	1657	1083	1849	2377	1477	1247	883	1430	865	1105	549	3908	818	1319	2064	1092	2015	1788	1752	836	862	1899	1028	936	1757	600	563	716	899	2758	1274	1449	1056
GCF_000224145.3	NC_020179	NC_020179.2	Ciona intestinalis chromosome 14; KH; whole genome shotgun sequence.	1442472	1438857	799108	796256	115294	4591987	0.31	0.31	0.17	0.17	0.03	0.35	0.9454	0.003	0.997	1.9267	309	325	634	1308397	1336445	727009	742261	20868	4134980	0.31	0.32	0.18	0.19	0	0.36	0.9147	0.0859	0.9203	1.9359	47337	252	285	537	282820	226866	182453	195933	5	888077	0.32	0.26	0.2	0.22	0.42	0.8711	0.3207	0.7432	1.9418	0	719104	782063	370257	371969	15195	2258588	0.32	0.36	0.16	0.16	0	0.32	0.8707	0.1845	0.8407	1.8784	0	32	29	61	11233	10830	6690	7031	1	35785	0.32	0.28	0.19	0.21	0	0.4	0.8678	0.3252	0.7498	1.8984	0	41509	44103	24634	24639	358	135243	0.31	0.36	0.16	0.17	0	0.32	0.8674	0.2073	0.8251	1.8857	12	4	16	207	267	307	389	0	1170	0.18	0.23	0.26	0.33	0.59	0.869	0.2677	0.771	1.9547	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	7512	7625	3699	4907	5535	4980	4573	6312	3033	4624	6890	10268	5636	3525	4185	7139	4251	4754	4784	6356	4555	3725	3021	6715	5220	3882	3131	6223	4507	4941	4187	5477	3064	4966	7137	4414	3931	2386	3892	2403	3769	1683	11924	2348	3593	6377	2501	5852	4132	4948	2893	2527	5274	3053	2622	5198	1494	1825	2207	2615	8870	3063	3997	3402
NA	NC_017929	NC_017929.1	Ciona intestinalis B CG-2006 mitochondrion; complete genome.	4827	6342	1595	1827	0	14591	0.33	0.43	0.11	0.13	0	0.23	0.8756	0.2034	0.8171	1.7749	39	0	39	4740	6237	1579	1810	0	14366	0.37	0.41	0.1	0.12	0	0.22	0.8181	0.2579	0.7861	1.7392	38	8	0	8	1867	2788	732	820	0	6207	0.3	0.46	0.12	0.12	0.24	0.8484	0.3484	0.7169	1.7622	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	24	0	24	626	603	148	193	0	1570	0.4	0.38	0.09	0.12	0.22	0.8	0.2429	0.7991	1.7306	1	2	0	2	718	714	152	205	1789	0.4	0.4	0.09	0.11	0	0.2	0.8247	0.157	0.8614	1.7204	28	11	60	44	7	15	42	145	21	9	70	34	41	3	43	9	77	14	36	223	5	10	9	39	5	6	40	26	81	17	17	36	10	102	23	6	7	7	14	4	7	1	50	0	1	68	9	101	13	35	2	0	200	38	35	14	1	4	2	11	19	7	42	13