GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_N Number of 'N' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_N Number of 'N' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_N Number of 'N' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_016801865.2	NC_068937	NC_068937.1	Culex pipiens pallens isolate TS chromosome 1; TS_CPP_V2; whole genome shotgun sequence.	43619011	43519251	26005734	25952903	57100	139153999	0.31	0.31	0.19	0.19	0.37	0.9396	0.0022	0.9978	1.9531	2372	2475	4847	27080760	26705002	16440707	16461156	21300	86708925	0.28	0.27	0.22	0.23	0.44	0.9166	0.1092	0.902	1.9687	628286	1978	1956	3934	1592905	1276364	1764994	1845527	0	6479790	0.25	0.2	0.26	0.28	0.55	0.8799	0.2738	0.7775	1.9502	549	13753885	13839970	7828216	7733926	10200	43166197	0.29	0.34	0.18	0.19	0	0.37	0.8605	0.3157	0.7575	1.8947	0	267	361	628	387894	366393	269283	279254	1302824	0.29	0.27	0.21	0.23	0	0.45	0.8883	0.2156	0.8179	1.9591	0	739693	732407	393294	404496	800	2270690	0.3	0.37	0.16	0.18	0	0.33	0.8393	0.3642	0.7202	1.8526	53631	86	87	173	2343	2997	3334	4029	12703	0.19	0.24	0.26	0.32	0.58	0.8854	0.2387	0.7946	1.9619	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	36060	61013	16117	21699	35660	58015	32423	25538	35067	34864	22638	53384	26519	50214	25389	54340	17777	46219	40557	26875	61735	29396	30730	39386	50118	41223	14396	31613	11170	46050	47323	20121	35991	10948	28808	53083	35251	26965	32659	46090	41066	37517	37779	39764	33626	29907	26060	23912	20852	21414	45881	48148	10448	19466	25067	35734	4902	49580	53468	27144	42765	6809	19853	41294
GCF_016801865.2	NC_068938	NC_068938.1	Culex pipiens pallens isolate TS chromosome 2; TS_CPP_V2; whole genome shotgun sequence.	71090427	71091817	40928819	40926549	59900	224097512	0.32	0.32	0.18	0.18	0.37	0.9413	0	1	1.9469	3625	3624	7249	44751861	44320517	26368076	26524651	27900	141993005	0.28	0.27	0.22	0.23	0.44	0.9155	0.1091	0.9019	1.9698	1377221	3124	2964	6088	2534593	2040448	2712231	2854089	1	10141362	0.25	0.21	0.26	0.28	0.54	0.8804	0.2774	0.7749	1.952	1741	23687608	23852869	13154785	13074428	15099	73784789	0.29	0.35	0.18	0.18	0	0.36	0.8556	0.3334	0.7467	1.8848	75841	266	270	536	196120	183870	141418	146883	668291	0.29	0.26	0.22	0.23	0	0.45	0.8839	0.222	0.8124	1.9598	0	614169	604364	326665	332596	300	1878094	0.3	0.37	0.15	0.18	0	0.33	0.8358	0.3784	0.7113	1.846	0	178	142	320	4413	5417	6060	7592	23482	0.19	0.23	0.26	0.32	0.58	0.8893	0.2373	0.7973	1.9637	2	152	154	4458	4325	4466	5077	18326	0.24	0.24	0.24	0.28	0	0.52	0.8809	0.0814	0.9227	1.9971	57424	96810	26344	34658	55461	88167	52136	42721	53664	55128	39196	85952	43009	76255	40314	84479	27739	70687	63983	43387	93526	46144	45089	65666	75692	62809	22674	51223	19201	73747	74924	32542	54493	17954	44782	78281	55918	40869	53164	69773	62841	55546	61258	59595	53740	49840	40350	38413	34446	36559	69149	69341	16993	30412	39622	56623	7656	73422	78666	42806	69243	11568	33062	66589
GCF_016801865.2	NC_068939	NC_068939.1	Culex pipiens pallens isolate TS chromosome 3; TS_CPP_V2; whole genome shotgun sequence.	59076624	59018828	34044030	34007992	47300	186194774	0.32	0.32	0.18	0.18	0.37	0.9407	0.001	0.999	1.9471	3015	3027	6042	39627463	39188220	23371015	23390871	24700	125602269	0.29	0.28	0.21	0.22	0.44	0.917	0.107	0.9044	1.9666	955878	2668	2624	5292	2172264	1720962	2365583	2459835	0	8718644	0.25	0.21	0.26	0.28	0.54	0.8787	0.278	0.7745	1.9517	55	21499611	21601094	11913225	11802152	13900	66829982	0.29	0.35	0.18	0.18	0	0.36	0.8575	0.3309	0.7485	1.8865	0	212	221	433	172682	163941	121591	128420	586634	0.29	0.27	0.21	0.23	0	0.44	0.8849	0.2245	0.8111	1.9562	105	282778	292639	154499	151383	400	881699	0.3	0.38	0.15	0.17	0	0.32	0.8269	0.392	0.7026	1.8353	0	94	88	182	2572	3151	3439	4306	13468	0.19	0.24	0.25	0.32	0.57	0.8898	0.2432	0.7913	1.9658	0	1	1	1069	1001	980	1119	4169	0.26	0.24	0.24	0.27	0	0.5	0.9428	0.0991	0.9061	1.998	49215	83936	21829	29746	48186	74154	44120	35533	46475	46912	31616	71016	37262	67710	34677	73692	23633	60690	54304	36368	82051	39290	38964	52428	68217	55540	18824	42924	15736	61690	62896	26040	46817	15099	39183	68143	47031	35892	45105	62658	57919	49150	52514	52894	44688	41192	32902	33703	27522	30146	61684	61298	13988	26033	35247	50535	6788	64493	70700	37046	59384	9542	28475	56832
NA	NC_015079	NC_015079.1	Culex pipiens pipiens mitochondrion; complete genome.	5847	5686	1921	1402	0	14856	0.39	0.38	0.13	0.09	0.22	0.8811	0.1701	0.8511	1.7628	9	4	13	3609	4974	1238	1395	0	11216	0.33	0.45	0.11	0.11	0.22	0.8471	0.3191	0.736	1.7375	16	1	1	2	311	442	119	106	0	978	0.31	0.47	0.1	0.11	0.21	0.8378	0.4666	0.6303	1.7036	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	4	5	9	236	241	56	78	611	0.39	0.4	0.09	0.13	0.22	0.8292	0.2614	0.79	1.7386	0	1	1	543	566	78	146	1333	0.41	0.42	0.06	0.11	0	0.17	0.8234	0.3243	0.7468	1.6416	4	0	8	15	1	0	7	24	1	0	16	7	9	0	9	2	8	0	5	28	0	5	0	2	0	1	4	2	9	9	2	3	1	19	10	0	0	0	2	0	0	0	3	0	0	10	2	3	6	9	0	1	48	7	0	5	0	0	0	1	7	2	5	4