GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	fr_chromo_N Frequency of 'N' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_N Number of 'N' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_N Number of 'N' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_N Number of 'N' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_015732765.1	NC_051861	NC_051861.1	Culex quinquefasciatus strain JHB chromosome 1; VPISU_Cqui_1.0_pri_paternal; whole genome shotgun sequence.	39355122	39435971	23354513	23398953	7331608	132876167	0.3	0.3	0.18	0.18	0.06	0.35	0.9403	0.002	0.998	1.9221	2099	2194	4293	23302541	23019071	14126534	14162143	678278	75288567	0.28	0.27	0.22	0.23	0.45	0.9152	0.1147	0.8973	1.9673	19663	1594	1642	3236	1242447	994712	1383402	1450645	0	5071206	0.25	0.2	0.26	0.28	0.55	0.8797	0.2766	0.7757	1.9502	6	11682832	11777241	6651747	6587397	426639	37125856	0.29	0.34	0.18	0.19	0	0.37	0.8622	0.3141	0.758	1.8963	0	278	285	563	135175	121340	104889	111314	472718	0.29	0.25	0.22	0.24	0	0.46	0.8769	0.2977	0.761	1.9447	380746	386625	207165	213583	32144	1220263	0.3	0.36	0.16	0.18	0	0.34	0.8372	0.3791	0.7082	1.8573	91	94	185	2506	3207	3557	4302	13572	0.19	0.24	0.26	0.32	0.58	0.8862	0.2365	0.7964	1.9626	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	28477	47766	12363	17117	27496	45021	25297	19535	27509	27455	17408	41180	21083	39743	19909	42218	13528	36154	31601	20678	48604	22999	24079	30194	39073	32409	11066	24244	8446	36170	37097	15551	27830	8370	22444	41124	27571	20246	25750	36491	32676	29790	28854	31464	26764	23281	20824	19202	16432	16693	36330	37805	8085	15127	20053	28024	3686	39341	42258	21594	33189	5351	16008	32861
GCF_015732765.1	NC_051862	NC_051862.1	Culex quinquefasciatus strain JHB chromosome 2; VPISU_Cqui_1.0_pri_paternal; whole genome shotgun sequence.	70289698	70391294	40961699	40964447	2554702	225161840	0.31	0.31	0.18	0.18	0.01	0.36	0.9406	0.0008	0.9992	1.9433	3523	3631	7154	41949128	41480773	24920135	25036950	724143	134111129	0.28	0.27	0.22	0.23	0.45	0.9148	0.1111	0.8996	1.9687	227627	2813	2942	5755	2385599	1916644	2549472	2680219	77	9532011	0.26	0.21	0.26	0.28	0.54	0.8802	0.2791	0.7739	1.9512	1858	23265903	23420150	13130730	13033578	406417	73256778	0.29	0.35	0.18	0.18	0	0.36	0.8572	0.3286	0.7499	1.8863	71260	353	371	724	148661	131342	110681	119628	510312	0.29	0.26	0.22	0.24	0	0.45	0.875	0.2861	0.7667	1.9491	534676	539205	277385	286114	36418	1673798	0.31	0.36	0.15	0.18	0	0.33	0.8321	0.3763	0.7108	1.8486	143	158	301	4118	5068	5751	7163	22100	0.19	0.23	0.26	0.32	0.58	0.8883	0.2352	0.7987	1.9624	100	3	103	3003	2888	2995	3404	12290	0.24	0.24	0.24	0.28	0	0.52	0.8808	0.0829	0.9215	1.9969	53447	90115	24514	32731	52396	82285	49046	39790	50369	52148	36066	81045	41148	72187	38254	78843	26574	65866	59852	40452	87243	42913	42263	60949	71139	59331	21246	47665	18023	68924	69988	30600	51181	16895	43020	73076	52924	37359	49386	64953	59199	52635	57449	55759	51046	46641	37264	36867	32855	34489	65262	65357	16093	28718	37701	53274	7626	69192	73709	40651	65815	11482	32417	63128
GCF_015732765.1	NC_051863	NC_051863.1	Culex quinquefasciatus strain JHB chromosome 3; VPISU_Cqui_1.0_pri_paternal; whole genome shotgun sequence.	62848096	62877177	36543230	36584543	2697631	201550677	0.31	0.31	0.18	0.18	0.01	0.36	0.939	0.0008	0.9992	1.942	3183	3180	6363	40341022	39859157	23867499	23874136	462254	128404068	0.29	0.27	0.21	0.23	0.44	0.9162	0.1091	0.9015	1.9669	294641	2590	2546	5136	2017271	1609582	2196621	2284113	0	8107587	0.25	0.21	0.26	0.28	0.54	0.8783	0.2772	0.7752	1.9512	634	21213803	21312656	11834943	11701074	292819	66355295	0.29	0.35	0.18	0.18	0	0.36	0.8581	0.3284	0.75	1.8879	0	341	324	665	149222	135343	115249	123023	522837	0.28	0.26	0.22	0.24	0	0.45	0.8766	0.2722	0.7768	1.9493	352469	354323	182996	186426	26	1076240	0.3	0.37	0.15	0.18	0	0.33	0.8326	0.3925	0.6994	1.8465	97	94	191	2720	3314	3600	4511	14145	0.2	0.24	0.25	0.32	0.57	0.8906	0.2406	0.7932	1.9666	1	7	8	3261	3017	3075	3498	12851	0.28	0.22	0.24	0.26	0	0.5	0.9009	0.1531	0.8658	1.9915	46301	76495	20200	27670	45076	68154	41234	33491	42871	43696	29425	65897	34671	62493	32296	67825	22593	56157	50517	34255	76015	36930	36309	48668	63105	51467	17682	39730	14993	57984	58134	24880	44020	14205	36540	63487	44147	32458	42040	58434	52993	45809	48623	49202	41416	38820	30692	31146	25790	28394	57468	56967	13189	24174	32162	46810	6425	59461	65215	34781	55872	9352	26664	52793
NA	NC_014574	NC_014574.1	Culex quinquefasciatus mitochondrion; complete genome.	6122	6032	2014	1419	0	15587	0.39	0.39	0.13	0.09	0	0.22	0.8812	0.1807	0.8449	1.7558	9	4	13	3613	4985	1253	1405	0	11256	0.33	0.45	0.11	0.11	0.23	0.8475	0.3325	0.7255	1.7387	15	1	1	2	307	443	118	110	0	978	0.31	0.48	0.1	0.11	0.22	0.8378	0.4562	0.6377	1.7072	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4	5	9	235	242	58	79	614	0.38	0.39	0.09	0.13	0.22	0.8347	0.253	0.7927	1.7474	0	1	1	543	565	78	147	1333	0.41	0.42	0.06	0.11	0	0.17	0.8238	0.3265	0.7458	1.6431	4	0	8	16	1	1	7	22	1	0	16	7	8	0	9	2	9	0	4	29	0	5	0	2	0	1	4	2	9	9	2	4	1	19	9	0	0	0	2	0	0	0	3	0	0	10	2	3	6	9	0	1	48	7	1	5	0	0	0	1	6	2	5	4