GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_N Number of 'N' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_036172545.1	NC_087085	NC_087085.1	Culicoides brevitarsis isolate CSIRO-B50_1 chromosome 1; AGI_CSIRO_Cbre_v1; whole genome shotgun sequence.	16878643	16875816	6414728	6432735	2320	46604242	0.36	0.36	0.14	0.14	0.28	0.9307	0.0015	0.9985	1.8495	2097	2044	4141	11289972	10900274	4478592	4527560	1100	31197498	0.34	0.32	0.17	0.17	0.34	0.8981	0.113	0.8975	1.907	83073	1965	1909	3874	2056367	1659386	1353673	1426896	6496322	0.32	0.26	0.2	0.22	0.42	0.8773	0.2783	0.7737	1.9428	5	5329227	5440804	1750935	1730539	800	14252305	0.36	0.43	0.1	0.11	0	0.21	0.7898	0.341	0.7384	1.6778	42	44	86	18290	15967	7894	8494	50645	0.36	0.31	0.16	0.17	0	0.33	0.8521	0.2856	0.7684	1.8731	147488	147088	46798	46777	388151	0.37	0.42	0.1	0.11	0	0.21	0.7825	0.3611	0.7253	1.6782	34	29	63	962	1096	1129	1419	4606	0.21	0.24	0.24	0.31	0.55	0.8901	0.2423	0.7917	1.9711	12	15	27	708	759	804	942	3213	0.22	0.24	0.25	0.29	0.54	0.8811	0.114	0.8931	1.9914	51228	53927	18879	25183	38861	33813	27081	62062	24499	28803	67952	79245	40217	39265	29849	46416	22050	26354	40664	56636	22347	15549	28038	51646	25244	17166	11949	58466	30105	39491	43537	29602	29508	26744	45381	34698	23686	16519	26808	21344	25102	23755	104101	24099	28516	37984	11904	31236	27976	35230	39969	27205	35292	17298	15563	27202	8161	18282	25755	27492	69693	18415	28181	41169
GCF_036172545.1	NC_087086	NC_087086.1	Culicoides brevitarsis isolate CSIRO-B50_1 chromosome 2; AGI_CSIRO_Cbre_v1; whole genome shotgun sequence.	15367218	15382955	6104435	6107807	2400	42964815	0.36	0.36	0.14	0.14	0.28	0.9312	0.0008	0.9992	1.8612	2094	2130	4224	10012709	9604207	4187089	4218942	1000	28023947	0.34	0.31	0.17	0.18	0.35	0.8999	0.1119	0.8986	1.9153	108431	1985	1994	3979	2118484	1711375	1447967	1509854	6787680	0.32	0.26	0.2	0.22	0.43	0.8776	0.2806	0.7723	1.9452	1	5172511	5279411	1731344	1703172	600	13887038	0.36	0.43	0.1	0.11	0	0.21	0.7926	0.343	0.7374	1.6868	39	51	90	18932	16482	8592	9394	53400	0.35	0.31	0.16	0.18	0	0.34	0.8536	0.2864	0.7679	1.8795	110062	111986	45153	45117	312318	0.35	0.43	0.1	0.12	0	0.22	0.786	0.3809	0.716	1.6987	39	36	75	1217	1370	1359	1713	5659	0.22	0.24	0.24	0.3	0.54	0.8871	0.2379	0.7951	1.977	0	3	3	78	84	90	105	357	0.22	0.24	0.25	0.29	0.55	0.8809	0.114	0.8929	1.991	52237	57149	18826	26838	39417	35477	27737	62425	26133	30627	68303	82296	41616	43149	31657	49108	22931	28592	42773	57447	24419	15822	30550	52326	26748	18629	12070	59875	29492	40974	46547	30836	32174	26417	47402	37069	25578	18233	27578	23326	26331	26864	105037	25651	30522	39716	12863	31178	29052	36368	44119	30490	34522	18138	16722	29010	7734	20476	28665	29538	72181	17959	29267	44317
GCF_036172545.1	NC_087087	NC_087087.1	Culicoides brevitarsis isolate CSIRO-B50_1 chromosome 3; AGI_CSIRO_Cbre_v1; whole genome shotgun sequence.	13057480	13047039	4958996	4951392	2701	36017608	0.36	0.36	0.14	0.14	0.28	0.9292	0.0012	0.9988	1.8488	1453	1459	2912	8731674	8466755	3460440	3484800	800	24144469	0.34	0.32	0.16	0.17	0.34	0.8984	0.109	0.901	1.9038	199331	1372	1380	2752	1438056	1180491	985767	1034602	4638916	0.31	0.26	0.2	0.22	0.42	0.878	0.2757	0.7755	1.946	0	4806186	4886262	1575132	1556796	500	12824876	0.36	0.43	0.1	0.11	0	0.21	0.7946	0.3331	0.7442	1.6834	26	22	48	10737	9772	4769	4979	30257	0.35	0.32	0.16	0.17	0	0.33	0.8505	0.2758	0.7765	1.8758	19304	21278	7131	7250	54963	0.35	0.44	0.1	0.12	0	0.21	0.7851	0.3998	0.7	1.6801	25	21	46	699	857	792	1004	3352	0.21	0.25	0.24	0.3	0.54	0.8823	0.2392	0.7951	1.9692	2	2	4	110	114	116	136	476	0.23	0.24	0.24	0.29	0.53	0.8809	0.098	0.9085	1.994	36682	37493	13396	18221	27442	24282	19073	43454	17840	21121	47840	54088	27988	29464	21461	32635	15777	20180	29009	40283	16449	11360	20229	36063	18183	12721	8547	40873	20915	28100	30911	20996	21732	19030	32119	25257	17552	12766	18559	16221	18214	18123	69886	18141	20874	26633	8968	20614	20358	25314	29738	21332	24585	12361	11368	19623	5830	14282	19748	19761	48557	12749	19966	29354
NA	NC_085211	NC_085211.1	Culicoides brevitarsis mitochondrion; complete genome.	6942	6963	1724	1471	0	17100	0.41	0.41	0.1	0.09	0.19	0.8705	0.0807	0.9251	1.694	18	19	37	5244	6688	1256	1585	0	14773	0.39	0.43	0.08	0.1	0.18	0.8059	0.2896	0.7634	1.6553	9	2	3	5	1473	2065	392	492	4422	0.34	0.47	0.08	0.11	0.19	0.839	0.3218	0.7309	1.6819	7	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	10	12	22	602	587	112	152	1453	0.41	0.4	0.08	0.1	0.18	0.7902	0.3057	0.7557	1.6548	0	2	2	908	871	114	202	2095	0.44	0.41	0.06	0.1	0.15	0.8008	0.2889	0.7686	1.6023	8	0	32	26	15	0	35	150	4	2	84	29	30	0	13	2	43	0	2	150	0	24	0	29	1	1	3	4	70	37	4	6	0	84	24	1	2	0	5	1	0	0	44	0	1	33	14	39	20	24	0	0	235	34	0	17	0	0	0	7	24	5	35	21