GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_N Number of 'N' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	fr_tRNA_N Frequency of 'N' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_009650485.2	NC_047627	NC_047627.2	Drosophila albomicans strain 15112-1751.03 chromosome X; ASM965048v2; whole genome shotgun sequence.	10537499	10526493	6266093	6266888	50	33597023	0.31	0.31	0.19	0.19	0.37	0.9459	0.0006	0.9994	1.953	1096	1170	2266	7468033	7359612	4655874	4584460	0	24067979	0.3	0.28	0.21	0.21	0.43	0.9119	0.1182	0.8945	1.9683	92175	1036	1041	2077	957037	770665	994345	998830	3720877	0.26	0.22	0.25	0.26	0.51	0.8807	0.2537	0.7928	1.963	63	2980341	3095674	1681965	1619672	0	9377652	0.3	0.36	0.18	0.16	0.34	0.8529	0.3097	0.7547	1.8791	0	43	63	106	25045	20718	14425	15069	75257	0.34	0.29	0.18	0.19	0.37	0.8553	0.3262	0.7409	1.8955	378252	397988	212447	220009	1208696	0.32	0.36	0.15	0.17	0.32	0.8443	0.2767	0.7809	1.8536	9	17	26	348	433	505	644	1930	0.18	0.22	0.26	0.33	0	0.59	0.8875	0.2447	0.7908	1.9539	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	28209	27585	5488	11601	35869	32525	23135	18818	13505	20432	24418	21211	18784	21086	13966	26927	11336	26708	16347	14991	33163	13173	17996	27729	37893	14510	8551	25353	13539	17123	24542	10211	17760	10937	28161	19033	19678	13522	11830	28457	34883	27388	18829	29660	25031	13289	7609	11710	13144	21516	23184	27604	7019	9220	12247	23601	2511	14269	19319	17026	36185	4484	11974	20167
GCF_009650485.2	NC_047628	NC_047628.2	Drosophila albomicans strain 15112-1751.03 chromosome 2L; ASM965048v2; whole genome shotgun sequence.	9482057	9492254	5744986	5750406	200	30469903	0.31	0.31	0.19	0.19	0.38	0.9493	0.001	0.999	1.9561	1445	1432	2877	6893213	6794456	4290400	4276628	150	22254847	0.3	0.28	0.2	0.21	0.41	0.9131	0.1117	0.899	1.9641	14732	1292	1231	2523	1086106	925897	987169	1012247	4011419	0.28	0.24	0.23	0.25	0.48	0.8837	0.2442	0.7984	1.9632	1	2657811	2746068	1511110	1479127	50	8394166	0.32	0.37	0.16	0.15	0.31	0.8423	0.2822	0.7719	1.8588	520	96	83	179	43246	36728	23421	24885	128280	0.34	0.29	0.18	0.19	0.37	0.8615	0.3094	0.7538	1.9018	360568	373066	216198	224931	1174763	0.32	0.36	0.15	0.16	0.32	0.8487	0.2714	0.7827	1.859	21	33	54	676	886	1055	1291	3908	0.18	0.23	0.27	0.33	0	0.6	0.8891	0.2685	0.7706	1.949	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	32119	32835	8821	16724	33358	32248	25515	25587	14720	23983	30365	27999	21050	19027	16880	26053	14727	27739	19381	21304	32089	14352	18173	30856	33604	15025	12230	29154	18142	19450	25175	15545	17854	15944	27866	19295	20237	13780	15342	26279	29182	23065	28489	25984	25633	16920	7939	15559	16011	22965	20504	22302	12699	12299	13307	24800	4427	11888	15793	16421	36136	8042	14597	18550
GCF_009650485.2	NC_047629	NC_047629.2	Drosophila albomicans strain 15112-1751.03 chromosome 3; ASM965048v2; whole genome shotgun sequence.	17140544	17129366	10613232	10612295	50	55495487	0.31	0.31	0.19	0.19	0.38	0.9508	0.0004	0.9996	1.9598	3065	3004	6069	12236701	11898822	7857627	7774724	50	39767924	0.3	0.28	0.21	0.21	0.42	0.9138	0.1129	0.8977	1.9673	170432	2729	2670	5399	2269188	1918661	2110637	2145446	8443932	0.27	0.24	0.24	0.25	0.49	0.8818	0.2489	0.7956	1.9631	1441	4633648	4799394	2688117	2608614	50	14729823	0.31	0.36	0.16	0.16	0.32	0.8421	0.2935	0.7635	1.864	0	143	149	292	69177	60665	40715	42540	213097	0.33	0.3	0.18	0.19	0.37	0.8643	0.264	0.7821	1.9118	229467	238518	134699	135712	738396	0.32	0.37	0.15	0.16	0.31	0.8322	0.3002	0.7617	1.8446	83	87	170	2345	2854	3347	4027	12573	0.19	0.23	0.27	0.32	0	0.59	0.8876	0.2112	0.8165	1.9636	24	2	26	702	651	832	909	3094	0.23	0.21	0.27	0.29	0	0.56	0.9044	0.0819	0.9213	1.9874	65963	68549	17134	34014	70609	68714	54834	52664	32414	50070	61909	58017	42721	40475	34432	56584	30600	58327	42235	43260	70435	30952	37829	63885	72977	33430	24776	59845	37948	41831	52999	30784	37271	31673	57650	41306	42967	30451	33365	57299	64931	50620	56628	56874	55090	34581	15620	33666	32962	47608	43278	47523	24052	24450	28233	53545	8225	24960	33756	34388	76965	16036	31527	39870
GCF_009650485.2	NC_047630	NC_047630.2	Drosophila albomicans strain 15112-1751.03 chromosome 4; ASM965048v2; whole genome shotgun sequence.	597394	593421	326924	322226	0	1839965	0.32	0.32	0.18	0.18	0.35	0.9417	0.0106	0.9895	1.9365	51	47	98	421764	410608	220293	220547	0	1273212	0.33	0.31	0.18	0.18	0.36	0.9165	0.0748	0.9305	1.9299	4536	42	35	77	68682	55043	44282	43847	211854	0.33	0.27	0.2	0.21	0.41	0.8794	0.2591	0.7851	1.942	0	198226	203537	99619	100050	0	601432	0.34	0.38	0.14	0.14	0.27	0.8473	0.2101	0.8269	1.8173	0	11	7	18	7251	6760	4684	4435	23130	0.32	0.29	0.2	0.2	0.4	0.8773	0.2644	0.78	1.9295	3650	4187	1938	1827	11602	0.32	0.37	0.17	0.14	0.31	0.8277	0.332	0.7359	1.8347	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2086	1447	867	1118	1498	950	1053	1973	612	943	2602	1628	1630	784	1071	1612	910	1035	841	1348	1069	716	624	1656	1372	679	943	1652	1224	928	1247	950	757	1771	1706	814	924	434	799	668	1186	636	2563	726	961	1065	388	919	829	1420	939	664	1449	578	628	1376	417	507	592	631	2519	853	767	916
GCF_009650485.2	NC_047631	NC_047631.2	Drosophila albomicans strain 15112-1751.03 chromosome 2R; ASM965048v2; whole genome shotgun sequence.	10775926	10800065	6852061	6863624	100	35291776	0.31	0.31	0.19	0.19	0.39	0.951	0.002	0.998	1.9639	1856	1827	3683	7468948	7279677	4892359	4852394	50	24493428	0.3	0.28	0.21	0.21	0.42	0.9147	0.1104	0.8997	1.9678	132121	1640	1618	3258	1412892	1199159	1274620	1303084	5189755	0.28	0.24	0.23	0.25	0.48	0.8832	0.2396	0.8014	1.9643	76	2938979	3051928	1763861	1720268	50	9475086	0.32	0.37	0.16	0.16	0.32	0.8392	0.2904	0.766	1.8598	814	117	99	216	56540	49281	32415	32470	170706	0.33	0.29	0.19	0.19	0.38	0.8645	0.2677	0.7808	1.9165	127125	128091	75568	74189	404973	0.33	0.37	0.14	0.15	0.3	0.8296	0.3243	0.7455	1.8233	34	31	65	936	1099	1221	1589	4845	0.19	0.23	0.25	0.33	0	0.58	0.88	0.2343	0.7998	1.9627	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	42205	42185	11460	21402	43022	40723	32278	33232	19545	30184	38926	35538	27346	24497	21617	34203	19007	35117	25997	28059	41530	18684	22617	38965	43480	19675	16337	37554	24037	25185	32150	19691	22433	21121	36606	25236	25971	17716	20156	33483	38572	29236	37058	34088	33253	21865	9889	20907	20587	29729	26541	28772	16711	15192	17619	32695	5780	15228	20218	20751	46902	11178	19848	24041