GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_017639315.1	NC_057927	NC_057927.1	Drosophila ananassae strain 14024-0371.13 chromosome 2L; ASM1763931v2; whole genome shotgun sequence.	8747085	8791358	6566334	6567978	30672755	0.29	0.29	0.21	0.21	0.43	0.9581	0.0026	0.9974	1.9851	1873	1892	3765	6215354	5980515	4796775	4669644	21662288	0.29	0.26	0.23	0.22	0.45	0.92	0.1105	0.8998	1.9803	38434	1716	1686	3402	1410069	1154521	1465344	1433504	5463438	0.26	0.22	0.26	0.26	0.51	0.8859	0.2467	0.7966	1.9624	40	2516434	2622494	1787331	1731735	8657994	0.31	0.36	0.17	0.16	0.33	0.8408	0.297	0.7611	1.8655	0	116	118	234	91376	82671	62670	61459	298176	0.31	0.28	0.21	0.21	0.42	0.883	0.2244	0.812	1.9452	78838	82857	53370	54105	269170	0.31	0.36	0.16	0.17	0.33	0.8413	0.3099	0.7562	1.8569	40	33	73	1080	1237	1363	1738	5418	0.2	0.23	0.25	0.32	0.57	0.8843	0.2243	0.8065	1.9692	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	38921	48292	12870	23499	33448	50005	29845	26016	32874	33257	29490	37513	23200	25298	23132	37725	20805	36055	32715	24741	48883	19659	27486	34823	48816	32362	17534	27352	18042	37654	34388	21877	23589	18005	28699	34697	28857	29483	24847	47240	38578	28161	35603	36756	30806	19463	16950	23705	17148	23839	25782	26893	13121	23820	25510	38802	6194	25778	29958	15633	36949	9668	17919	25974
GCF_017639315.1	NC_057928	NC_057928.1	Drosophila ananassae strain 14024-0371.13 chromosome 2R; ASM1763931v2; whole genome shotgun sequence.	7814269	7815188	5763486	5768694	27161637	0.29	0.29	0.21	0.21	0.42	0.9535	0.0005	0.9995	1.9835	1480	1523	3003	5431042	5225336	4140886	4045634	18842898	0.28	0.26	0.23	0.22	0.45	0.9179	0.1171	0.8943	1.979	18710	1344	1351	2695	1113662	894232	1196151	1160459	4364504	0.26	0.22	0.26	0.26	0.52	0.8828	0.2616	0.7872	1.9568	1	2293748	2383203	1620884	1582785	7880620	0.31	0.36	0.17	0.16	0.34	0.8434	0.3006	0.7596	1.8703	0	98	121	219	81622	74052	53119	53993	262786	0.32	0.29	0.19	0.2	0.4	0.8762	0.2471	0.7977	1.9285	157740	162495	104785	105210	530230	0.32	0.36	0.15	0.16	0.31	0.8316	0.312	0.7536	1.8413	24	18	42	574	755	823	1004	3156	0.18	0.24	0.26	0.32	0.58	0.8761	0.2475	0.7881	1.9642	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	29579	39853	9454	18328	26294	41212	23996	19081	27797	26003	22054	28750	17941	20550	18200	30113	15998	29523	25713	17365	41764	15209	22921	26767	41161	27250	13271	20828	13589	31182	28246	16133	19454	13453	21831	27663	23659	25313	19908	40459	32537	22301	26443	29877	24269	14673	13721	19599	12926	18327	21300	21629	9283	18911	22147	31809	4812	21599	24749	12092	29142	7343	13914	20705
GCF_017639315.1	NC_057929	NC_057929.1	Drosophila ananassae strain 14024-0371.13 chromosome 3L; ASM1763931v2; whole genome shotgun sequence.	7538876	7476070	5707770	5704700	26427416	0.29	0.28	0.22	0.22	0.43	0.9584	0.0045	0.9956	1.9865	1542	1554	3096	5075544	4883808	3982249	3887885	17829486	0.28	0.26	0.23	0.23	0.46	0.9192	0.1105	0.8996	1.982	53055	1388	1354	2742	1101714	905859	1187315	1157791	4352679	0.26	0.22	0.26	0.26	0.52	0.8839	0.2529	0.7923	1.9615	26	2169499	2236920	1562644	1522018	7491081	0.3	0.35	0.18	0.17	0.35	0.8426	0.313	0.7497	1.8772	36493	108	81	189	47123	43827	31817	31983	154750	0.31	0.29	0.2	0.21	0.4	0.8736	0.2397	0.8016	1.9358	94157	98177	67744	68063	328141	0.31	0.36	0.16	0.17	0.33	0.8397	0.2909	0.7667	1.8623	39	63	102	1371	1690	2012	2457	7530	0.18	0.22	0.27	0.33	0.59	0.8892	0.2265	0.8026	1.9586	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	30176	38921	9709	18256	25951	41278	23297	19360	27160	27671	21612	28748	17900	20019	17848	29777	16303	29476	26848	18090	42217	15515	22823	26747	39658	26677	13334	20702	13633	29864	28430	16793	19582	13515	22134	28507	23430	24415	20144	39847	31296	22999	25534	30110	24971	15154	13534	19501	13650	18796	20585	21309	9203	18794	20923	30821	4723	22132	23889	12723	28665	7089	14222	20685
GCF_017639315.1	NC_057930	NC_057930.1	Drosophila ananassae strain 14024-0371.13 chromosome 3R; ASM1763931v2; whole genome shotgun sequence.	8407466	8372393	6006603	6022737	28809199	0.29	0.29	0.21	0.21	0.42	0.9508	0.0034	0.9966	1.9803	1497	1638	3135	5056026	4882909	3770673	3698193	17407801	0.29	0.27	0.22	0.22	0.45	0.9177	0.1114	0.8991	1.9763	12961	1344	1316	2660	1121168	918927	1162199	1136353	4338647	0.27	0.23	0.25	0.26	0.51	0.8854	0.2492	0.7949	1.9606	5	1877515	1955871	1284180	1251072	6368638	0.31	0.36	0.17	0.16	0.33	0.8389	0.3024	0.758	1.8574	0	109	141	250	86408	77245	54259	55312	273224	0.32	0.28	0.2	0.2	0.4	0.876	0.2425	0.8011	1.9295	114762	117745	74765	73989	381261	0.32	0.37	0.15	0.16	0.31	0.8341	0.3147	0.7497	1.843	22	23	45	563	759	873	1062	3257	0.18	0.23	0.27	0.33	0.59	0.8888	0.2619	0.7757	1.952	1	115	116	3132	3018	3595	4059	13804	0.23	0.22	0.26	0.29	0	0.55	0.9153	0.0795	0.9244	1.9898	30262	38476	10204	19363	25736	40687	23920	21080	25844	26783	23627	31444	18965	20148	18609	29080	16674	28594	25703	19203	38635	15867	22027	27875	38229	25827	13440	21951	14374	30008	27807	17170	19405	14610	23532	27502	22683	24300	19552	37377	29650	21121	28274	28265	24009	16183	13519	18718	13581	18875	20436	20239	10233	19581	20617	31667	4539	20644	23787	12809	28914	7159	13767	20161
GCF_017639315.1	NC_057931	NC_057931.1	Drosophila ananassae strain 14024-0371.13 chromosome XL; ASM1763931v2; whole genome shotgun sequence.	5877427	5894966	4399913	4394419	20566725	0.29	0.29	0.21	0.21	0.43	0.9523	0.0021	0.9979	1.9848	799	801	1600	3703051	3569564	2833268	2739211	12845094	0.27	0.25	0.24	0.23	0.47	0.9159	0.1211	0.8911	1.9769	21640	721	706	1427	604549	467488	770747	739827	2582611	0.24	0.2	0.28	0.28	0.56	0.8808	0.2581	0.7891	1.951	0	1705559	1766830	1168606	1126811	5767806	0.28	0.34	0.21	0.17	0.38	0.8519	0.3319	0.7378	1.8961	0	72	72	144	46978	42728	29704	31177	150587	0.32	0.27	0.2	0.21	0.4	0.8749	0.2619	0.7881	1.9278	103459	111016	79907	78564	372946	0.31	0.37	0.16	0.16	0.31	0.8319	0.3271	0.7411	1.8345	5	12	17	201	277	332	417	1227	0.16	0.23	0.27	0.34	0.61	0.8865	0.2903	0.7557	1.9372	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	16317	22914	4405	9403	16187	29407	13201	7305	18851	15975	10014	13803	9915	13908	10064	16699	8432	17913	14107	6074	28056	9125	15120	14497	27992	17651	6233	8442	5713	17469	17724	6956	12537	5787	12055	18849	14845	17010	10607	28545	22075	17093	8966	22216	14814	6396	9449	10635	6342	10180	13926	15846	3055	11535	14082	19517	1918	18058	19409	7703	14572	2303	7236	11962
GCF_017639315.1	NC_057932	NC_057932.1	Drosophila ananassae strain 14024-0371.13 chromosome XR; ASM1763931v2; whole genome shotgun sequence.	6664429	6574248	4464230	4459050	22161957	0.3	0.3	0.2	0.2	0.4	0.9385	0.0074	0.9927	1.9725	571	524	1095	3126276	3083585	2188400	2161738	10559999	0.29	0.26	0.23	0.22	0.45	0.9149	0.1246	0.8888	1.9692	1010	466	441	907	362335	283790	421381	409596	1477102	0.25	0.21	0.27	0.27	0.54	0.8805	0.2713	0.7802	1.9482	0	1304153	1352880	841178	823304	4321515	0.3	0.35	0.19	0.17	0.36	0.8491	0.3077	0.756	1.8773	0	92	59	151	52044	46039	30274	30829	159186	0.32	0.29	0.19	0.19	0.39	0.8664	0.3183	0.7486	1.9093	240569	249748	164555	170826	825698	0.32	0.37	0.15	0.16	0.31	0.8319	0.3278	0.7418	1.8236	11	10	21	315	379	401	527	1622	0.2	0.24	0.24	0.32	0.57	0.9031	0.241	0.7905	1.9695	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	9368	12972	3058	6359	9336	15641	7673	5386	9736	8762	6660	9002	5847	7284	5764	9744	5052	9752	8161	4763	14160	5235	7986	8504	14553	9471	4223	5666	3821	11229	9783	4845	7067	4192	7284	10569	8324	9010	6363	14508	11163	8276	6864	12362	7912	4470	5321	6197	4061	6455	7548	8549	2722	6797	7564	10867	1419	9005	9894	4444	9312	1768	4006	7348