GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	fr_tRNA_N Frequency of 'N' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_023558435.1	NC_084881	NC_084881.1	Drosophila sulfurigaster albostrigata strain 15112-1811.04 chromosome 2L; ASM2355843v2; whole genome shotgun sequence.	9599158	9617438	5884805	5881656	0	30983057	0.31	0.31	0.19	0.19	0.38	0.9494	0.0012	0.9988	1.9579	1518	1501	3019	6652295	6529444	4170555	4152629	21504923	0.3	0.28	0.2	0.21	0.41	0.9125	0.114	0.897	1.9639	59715	1271	1244	2515	1035367	889102	942075	967203	3833747	0.28	0.24	0.23	0.25	0.48	0.8844	0.2401	0.8015	1.9637	1	2246050	2316305	1281474	1254016	7097845	0.32	0.37	0.16	0.15	0.31	0.8411	0.2873	0.7683	1.8575	112	138	250	72716	62856	42577	44835	222984	0.33	0.29	0.19	0.2	0.38	0.8709	0.2603	0.7855	1.9225	101	331099	343492	196658	200346	1071595	0.32	0.36	0.15	0.17	0.32	0.8452	0.2903	0.7705	1.8593	28	24	52	661	859	1009	1237	3766	0.18	0.23	0.26	0.33	0	0.59	0.8896	0.266	0.7725	1.9509	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	31085	31871	8344	15917	31952	30694	24710	24587	13895	23199	29153	26707	20084	18130	16060	24778	13932	26726	18818	20510	31236	13685	17260	29505	32076	14049	11873	28338	17582	18170	24354	14841	16926	15266	26491	18360	19100	13248	14644	25033	27638	22005	27042	24811	24688	16103	7346	14661	15494	21709	19606	21191	12256	11804	12760	23755	4053	11253	15184	15929	34180	7489	13724	17408
GCF_023558435.1	NC_084882	NC_084882.1	Drosophila sulfurigaster albostrigata strain 15112-1811.04 chromosome 2R; ASM2355843v2; whole genome shotgun sequence.	11464775	11504723	7320171	7338000	200	37627869	0.3	0.31	0.19	0.2	0.39	0.9484	0.003	0.997	1.9645	1933	1919	3852	8019881	7811810	5252821	5220061	26304573	0.3	0.28	0.21	0.21	0.42	0.915	0.1089	0.9009	1.9676	223002	1520	1485	3005	1219923	1035798	1080840	1112040	4448601	0.28	0.25	0.23	0.25	0.48	0.8834	0.2406	0.8007	1.9634	77	2332725	2425336	1402944	1375618	7536623	0.32	0.36	0.16	0.16	0.32	0.8384	0.2893	0.7666	1.8599	129	160	289	84785	75806	51463	53030	265084	0.32	0.29	0.19	0.2	0.39	0.8702	0.2613	0.7861	1.9205	132	261565	271454	165242	166043	864304	0.32	0.37	0.15	0.16	0.31	0.8285	0.3197	0.7489	1.8311	36	30	66	946	1118	1235	1610	4909	0.19	0.23	0.25	0.33	0	0.58	0.8808	0.2376	0.7971	1.9627	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	36713	37309	10182	18480	36034	35636	27538	29272	16554	25533	34175	31304	23343	20766	18558	29156	16213	30357	22587	24640	35705	16134	19300	33877	36535	16986	14091	32524	21250	21620	27350	17009	19193	18774	31204	21659	21706	15044	17447	28400	32498	24626	33182	28918	27764	19124	8385	17970	17435	25256	22356	23988	14915	13048	14864	27585	4919	12324	16866	17613	39660	9528	16395	20058
GCF_023558435.1	NC_084883	NC_084883.1	Drosophila sulfurigaster albostrigata strain 15112-1811.04 chromosome 3; ASM2355843v2; whole genome shotgun sequence.	17341318	17319461	10755303	10793772	0	56209854	0.31	0.31	0.19	0.19	0.38	0.9506	0.0024	0.9976	1.9604	3154	3192	6346	12121246	11771595	7824485	7739967	39457293	0.3	0.28	0.21	0.21	0.42	0.9138	0.1122	0.8982	1.9675	202674	2682	2621	5303	2205543	1871870	2050881	2081922	8210216	0.27	0.24	0.24	0.25	0.49	0.8822	0.2462	0.7974	1.9637	6011	4251809	4409111	2471717	2400832	13533469	0.31	0.36	0.16	0.16	0.32	0.8417	0.2937	0.7633	1.8637	222	192	414	130883	115434	76520	79211	402048	0.33	0.29	0.18	0.19	0.37	0.8684	0.2459	0.7967	1.9169	70	205009	211052	124734	124997	665792	0.32	0.36	0.15	0.16	0.32	0.8321	0.3125	0.7533	1.8481	96	72	168	2327	2831	3314	3989	12461	0.19	0.23	0.27	0.32	0	0.59	0.8859	0.2181	0.8114	1.9628	1	115	116	3133	2900	3712	4058	13803	0.23	0.21	0.27	0.29	0	0.56	0.9043	0.0831	0.9202	1.9873	64439	67538	16668	33154	67384	66899	52822	51358	31517	48934	60360	56365	41704	38962	33890	54564	30028	56981	41675	42164	69236	29869	37120	62054	70721	32531	24561	58810	36739	40117	51792	30093	36459	30651	56130	39930	41381	29660	32362	55080	62560	48784	54886	54933	53517	33647	15154	32542	32026	46204	42206	45570	23597	24056	27688	52772	7869	24264	32771	33485	75382	15461	30177	38696
GCF_023558435.1	NC_084884	NC_084884.1	Drosophila sulfurigaster albostrigata strain 15112-1811.04 chromosome 4; ASM2355843v2; whole genome shotgun sequence.	816637	792484	441258	444815	0	2495194	0.33	0.32	0.18	0.18	0.36	0.9409	0.019	0.9812	1.9384	56	67	123	426538	421471	228150	228647	1304806	0.33	0.32	0.18	0.18	0.36	0.914	0.0966	0.9134	1.927	407	25	23	48	30832	24999	20926	20935	97692	0.33	0.26	0.2	0.21	0.42	0.8824	0.2742	0.7723	1.9413	0	97605	100870	47607	48089	294171	0.34	0.37	0.14	0.14	0.28	0.8479	0.2222	0.8187	1.8228	7	18	25	6865	7018	3742	4328	21953	0.32	0.3	0.17	0.21	0.38	0.8648	0.3302	0.7397	1.8992	0	13230	14077	6335	6152	39794	0.32	0.4	0.13	0.15	0.28	0.8191	0.3587	0.7272	1.7951	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	783	674	367	495	682	505	472	891	352	498	1106	804	727	398	503	699	423	468	480	544	440	371	317	826	575	368	354	715	582	484	570	417	362	661	730	417	419	230	399	371	498	350	1110	350	420	458	190	471	445	639	440	335	633	295	272	639	163	272	281	308	1052	452	461	474
GCF_023558435.1	NC_084885	NC_084885.1	Drosophila sulfurigaster albostrigata strain 15112-1811.04 chromosome X; ASM2355843v2; whole genome shotgun sequence.	10426979	10413012	6277285	6269127	0	33386403	0.31	0.31	0.19	0.19	0.38	0.9462	0.0013	0.9987	1.955	1186	1117	2303	7605498	7466926	4785269	4702251	24559944	0.3	0.28	0.21	0.21	0.43	0.9128	0.1164	0.8955	1.9691	173375	1040	991	2031	916431	737552	952401	958133	3564517	0.26	0.22	0.25	0.26	0.51	0.8808	0.2519	0.7941	1.9636	44	2720733	2825231	1560211	1499613	8605788	0.3	0.36	0.18	0.16	0.34	0.8525	0.3103	0.754	1.8785	69	54	123	35993	31709	20268	21648	109618	0.33	0.29	0.18	0.2	0.38	0.8561	0.3314	0.7407	1.8999	0	303495	319202	171367	179878	973942	0.32	0.35	0.16	0.18	0.33	0.849	0.2938	0.7725	1.8655	15	14	29	387	481	567	721	2156	0.18	0.22	0.26	0.33	0	0.6	0.8883	0.243	0.7918	1.9528	2	0	2	599	636	412	515	2162	0.27	0.3	0.2	0.24	0	0.44	0.9044	0.1647	0.8498	1.9836	26885	26512	5089	10987	34511	31415	22360	17970	13060	19365	23490	20522	17866	20053	13293	26048	10707	25520	15799	14309	32028	12829	17272	26928	36999	13946	8081	24114	13071	16628	23722	9906	17036	10276	26499	18435	18951	12723	11539	27520	33205	26210	17881	28581	23767	12586	7337	10867	12544	20711	22070	26477	6565	8712	11552	22054	2451	13554	18335	16373	34804	4257	11476	19357