GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_N Number of 'N' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	fr_tRNA_N Frequency of 'N' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_016746235.2	NC_053029	NC_053029.1	Drosophila teissieri strain GT53w chromosome 2L; Prin_Dtei_1.1; whole genome shotgun sequence.	8072976	8042094	6093131	6067374	1891	28277466	0.29	0.28	0.22	0.21	0.43	0.9575	0.004	0.996	1.9858	1567	1476	3043	4722261	4558544	3726146	3641434	200	16648585	0.28	0.25	0.24	0.23	0.47	0.9195	0.1141	0.897	1.9835	43200	1450	1342	2792	1117438	925980	1203001	1181543	4427962	0.26	0.22	0.26	0.26	0.52	0.8851	0.2416	0.8001	1.9633	4	2194923	2267646	1560055	1518279	200	7541103	0.3	0.34	0.19	0.17	0.36	0.8549	0.2639	0.7837	1.9031	50	50	100	23381	20902	16364	16267	76914	0.31	0.28	0.2	0.21	0.41	0.8708	0.2433	0.7977	1.9388	14756	17500	9783	10161	52200	0.31	0.36	0.17	0.16	0.33	0.8296	0.3154	0.749	1.8573	34	37	71	910	1191	1361	1732	5194	0.18	0.23	0.26	0.33	0	0.59	0.8919	0.2748	0.7649	1.9513	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	30891	38448	9651	18551	29065	41833	23652	19637	26578	28325	22556	28285	19177	22158	18681	30079	15481	31819	27286	18591	42903	15939	21527	28369	40471	26644	13268	21337	13815	29029	30012	16964	19742	13754	22388	28005	25401	22793	21121	37900	31643	25916	24861	30641	27506	15397	12764	18790	13596	19645	21782	24204	9709	18114	20887	30850	4629	21133	23948	13230	28808	7366	14083	21200
GCF_016746235.2	NC_053030	NC_053030.1	Drosophila teissieri strain GT53w chromosome 2R; Prin_Dtei_1.1; whole genome shotgun sequence.	6702889	6694902	5180483	5189223	796	23768293	0.28	0.28	0.22	0.22	0.44	0.9559	0.0014	0.9986	1.9882	1483	1518	3001	4132833	3970023	3340284	3264847	0	14707987	0.27	0.25	0.24	0.24	0.47	0.9187	0.1159	0.8956	1.9847	22403	1361	1359	2720	1042717	850319	1111882	1100167	4105085	0.26	0.22	0.26	0.27	0.53	0.8839	0.2511	0.7935	1.9612	2	1567675	1632889	1158333	1115661	0	5474558	0.3	0.34	0.19	0.18	0.37	0.8534	0.2764	0.7745	1.9075	40	57	97	15185	13970	10091	10309	49555	0.31	0.29	0.2	0.21	0.4	0.873	0.2616	0.7826	1.9353	25976	26542	17332	16438	86288	0.31	0.36	0.17	0.16	0.33	0.8454	0.2761	0.7764	1.8761	30	35	65	859	1062	1317	1569	4807	0.18	0.22	0.27	0.33	0	0.6	0.8843	0.2158	0.8122	1.9548	21	0	21	546	525	693	735	2499	0.22	0.21	0.28	0.29	0	0.57	0.9044	0.049	0.9522	1.9848	28853	37915	8999	16645	26149	39870	22115	18307	24802	25527	20868	26091	17072	20329	17384	27858	13957	29603	25091	16542	41597	14796	20031	26921	38243	24777	12339	19998	12147	27344	27733	15200	17647	12799	20194	25477	23123	21447	19380	35709	29901	23987	23988	28650	24799	13981	11683	17666	12133	17933	20184	22222	8750	16325	19849	28221	4345	19134	22090	12108	27042	6975	12891	19718
GCF_016746235.2	NC_053031	NC_053031.1	Drosophila teissieri strain GT53w chromosome 3L; Prin_Dtei_1.1; whole genome shotgun sequence.	7000101	7039027	5257200	5255447	100	24551875	0.29	0.29	0.21	0.21	0.43	0.9581	0.0029	0.9971	1.9851	1495	1412	2907	4442937	4237807	3471196	3381125	0	15533065	0.28	0.25	0.24	0.23	0.47	0.9186	0.1207	0.892	1.9824	45464	1407	1317	2724	1084826	878526	1157897	1133605	4254854	0.26	0.22	0.26	0.26	0.52	0.8827	0.2576	0.7897	1.9589	1	1880363	1944706	1320153	1272928	0	6418150	0.3	0.34	0.19	0.17	0.36	0.8557	0.2712	0.7786	1.8999	43	40	83	18689	16675	13185	13483	62032	0.31	0.28	0.2	0.21	0.41	0.8729	0.2697	0.7832	1.9296	41158	43309	27676	27508	139651	0.3	0.35	0.18	0.17	0.35	0.8466	0.2864	0.7705	1.8903	39	11	50	692	872	975	1184	3723	0.19	0.23	0.26	0.32	0	0.58	0.8794	0.241	0.7929	1.9643	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	29497	38425	9079	17865	27855	40262	23535	19040	26226	25419	21993	27832	17752	20489	18252	28740	14508	30822	24698	17037	41339	15784	21037	28580	40873	26300	12720	20547	13290	29788	28636	15533	18264	12973	20515	25785	24516	22760	20253	37652	31240	23768	24551	29058	24997	14476	11821	17839	12686	18881	20730	22728	8622	17217	20103	30644	4618	19058	23104	12391	28953	7072	13786	20593
GCF_016746235.2	NC_053032	NC_053032.1	Drosophila teissieri strain GT53w chromosome 3R; Prin_Dtei_1.1; whole genome shotgun sequence.	9077572	9066047	6979800	6977092	200	32100711	0.28	0.28	0.22	0.22	0.43	0.9571	0.0008	0.9992	1.9877	1792	1858	3650	6165892	5982686	4923652	4810588	0	21882818	0.27	0.25	0.24	0.23	0.47	0.9208	0.1111	0.8993	1.9863	63876	1695	1698	3393	1357454	1105273	1467673	1446886	5377286	0.26	0.22	0.26	0.27	0.53	0.8846	0.2465	0.7968	1.962	56	2836529	2950248	2065984	2007089	0	9859850	0.3	0.34	0.19	0.18	0.37	0.8558	0.266	0.782	1.9057	41	69	110	23619	21014	16713	16832	78178	0.3	0.27	0.22	0.21	0.43	0.8796	0.2448	0.7962	1.9504	28577	29784	21145	20310	99816	0.3	0.35	0.18	0.17	0.35	0.8546	0.2802	0.7733	1.8896	31	52	83	1217	1409	1544	1987	6157	0.2	0.23	0.25	0.32	0	0.57	0.8854	0.2235	0.8087	1.9681	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	38311	48329	11368	21941	35768	51774	28953	23034	32194	32977	27119	33719	22783	26985	22543	36075	18440	39011	32200	21708	53652	19527	26666	34966	50574	32225	16034	25535	15595	36337	35882	19476	23150	16096	27227	33695	30438	28363	24929	47322	40063	31744	29854	38197	32952	17793	15379	22817	16092	23668	27267	29613	11006	21416	25606	37893	5710	25733	29828	15637	35581	8676	17217	25689
GCF_016746235.2	NC_053033	NC_053033.1	Drosophila teissieri strain GT53w chromosome 4; Prin_Dtei_1.1; whole genome shotgun sequence.	457393	459764	254405	256482	100	1428144	0.32	0.32	0.18	0.18	0.36	0.9437	0.0067	0.9934	1.9408	43	50	93	345518	336048	185328	184828	0	1051722	0.33	0.31	0.18	0.18	0.36	0.9169	0.0708	0.9336	1.9366	1933	38	48	86	84654	67734	54778	54534	261700	0.32	0.26	0.2	0.21	0.41	0.885	0.2499	0.7915	1.9494	0	157579	163839	79398	79607	0	480423	0.34	0.37	0.14	0.14	0.28	0.8394	0.214	0.8234	1.8261	5	3	8	2167	1915	1201	1205	6488	0.32	0.29	0.19	0.19	0.38	0.8759	0.2222	0.8105	1.9319	13028	14467	7140	7230	41865	0.31	0.34	0.16	0.18	0.34	0.8547	0.3167	0.7657	1.8728	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2335	2066	1189	1410	1559	1280	1185	2218	994	1180	2692	2260	1615	1100	1378	1957	1213	1125	1253	1874	1462	868	874	1704	1815	974	1293	1951	1394	1375	1300	1435	902	2110	1957	1166	1161	707	1043	854	1376	679	3651	834	1011	1324	602	1128	915	1495	1004	821	2004	816	914	1541	730	623	837	739	2683	1327	866	912
GCF_016746235.2	NC_053034	NC_053034.1	Drosophila teissieri strain GT53w chromosome X; Prin_Dtei_1.1; whole genome shotgun sequence.	6666634	6708301	5255973	5249114	200	23880222	0.28	0.28	0.22	0.22	0.44	0.9568	0.0038	0.9962	1.9895	1131	1130	2261	4222091	4052028	3521457	3416851	0	15212427	0.27	0.24	0.25	0.24	0.49	0.9181	0.1175	0.8944	1.9847	12964	1075	1038	2113	878521	690261	1082819	1061449	3713050	0.24	0.2	0.28	0.28	0.56	0.8806	0.2523	0.7935	1.9537	22	1640883	1705877	1220630	1161804	0	5729194	0.28	0.32	0.21	0.18	0.39	0.8662	0.2792	0.7728	1.9263	37	35	72	19283	18247	14146	14747	66423	0.3	0.26	0.22	0.23	0.44	0.8781	0.267	0.782	1.9471	68888	70847	48627	49997	238359	0.29	0.36	0.17	0.18	0.35	0.8437	0.3101	0.7566	1.8751	14	12	26	380	461	495	646	1982	0.19	0.23	0.25	0.33	0	0.57	0.8986	0.2501	0.7835	1.9649	1	20	21	10021	9846	5999	7665	33531	0.28	0.29	0.19	0.24	0	0.43	0.9005	0.1579	0.8568	1.9784	24464	31412	6168	12681	28018	38921	20410	12184	22964	22746	16118	19854	14720	20933	14217	23901	11185	28557	19994	10085	40887	13816	18347	23224	40117	23216	9091	14404	8206	23346	25860	10193	16427	8238	17653	24235	22972	19725	15546	38229	32115	28158	13590	33004	23738	10065	11291	13538	9676	16503	21268	26822	4491	13823	18006	27895	2821	21580	25307	11815	23564	3748	10363	18939