GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_N Number of 'N' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_914767665.1	NC_059501	NC_059501.1	Harmonia axyridis chromosome 1; icHarAxyr1.1; whole genome shotgun sequence.	28742403	28757130	15164599	15180104	900	87845136	0.33	0.33	0.17	0.17	0.35	0.9404	0.0008	0.9992	1.9299	1730	1688	3418	20219499	20316072	10719038	10780674	0	62035283	0.33	0.32	0.17	0.18	0.34	0.9092	0.1045	0.9058	1.9159	66965	1472	1393	2865	1516415	1184946	838066	940295	4479722	0.33	0.27	0.18	0.21	0.4	0.8722	0.3069	0.7524	1.925	14	13144862	13477493	7011816	6947276	0	40581447	0.33	0.37	0.15	0.15	0.3	0.8629	0.2005	0.8343	1.858	22275	196	205	401	144204	137211	67613	73550	422578	0.34	0.31	0.16	0.18	0.34	0.8704	0.2393	0.7986	1.8967	369387	383302	188104	187154	1127947	0.33	0.39	0.14	0.15	0.29	0.843	0.2494	0.7958	1.8344	62	60	122	1712	2043	2292	2961	9008	0.19	0.23	0.25	0.33	0.58	0.8896	0.2332	0.7993	1.9622	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	37192	40588	20020	22538	22059	26019	20850	37823	16100	21710	47094	58050	29357	12647	22381	30732	23489	19301	28341	33073	22836	17709	15887	38299	25473	17105	18208	32506	28907	27047	24131	23532	13836	35928	30422	19844	14427	10393	19362	13027	15799	5234	71458	10507	14395	26048	9286	39308	19543	22677	12311	7530	27799	18969	19610	25114	11731	5952	8171	7805	39988	15689	22033	13487
GCF_914767665.1	NC_059502	NC_059502.1	Harmonia axyridis chromosome 2; icHarAxyr1.1; whole genome shotgun sequence.	20957626	21049407	11218996	11205474	1700	64433203	0.33	0.33	0.17	0.17	0.35	0.9429	0.0028	0.9972	1.9323	1144	1135	2279	13594414	13671601	7214248	7262619	700	41743582	0.33	0.32	0.17	0.18	0.35	0.908	0.1103	0.9006	1.9163	29256	931	909	1840	1091960	854918	594526	672568	3213972	0.33	0.27	0.18	0.21	0.4	0.8746	0.2946	0.761	1.9284	975	8293076	8505794	4431853	4388989	200	25619912	0.33	0.37	0.15	0.15	0.3	0.8663	0.1919	0.8402	1.8616	0	164	130	294	84887	80723	39616	42869	248095	0.34	0.31	0.16	0.18	0.34	0.8645	0.2506	0.7918	1.8963	313674	325944	163723	162312	965653	0.32	0.39	0.14	0.14	0.29	0.8417	0.253	0.7924	1.8345	44	76	120	1515	1992	2342	2890	8739	0.17	0.23	0.27	0.33	0.6	0.8831	0.2511	0.7841	1.9478	1	1	2	56	50	62	70	238	0.24	0.21	0.26	0.29	0	0.55	0.8869	0.1172	0.8893	1.9889	26381	29472	13688	15905	15360	18223	13858	27020	11930	16179	34089	42372	23057	9030	15968	21650	17006	13784	20895	24592	15650	12184	11236	26402	17831	11838	12483	22569	21721	19303	17297	15932	9368	24919	22240	13566	10353	6972	13690	8599	11197	3806	51650	7502	11357	18349	6413	28791	15032	16305	9361	5428	19603	13243	14025	17352	8865	4503	5934	5936	27949	12917	17963	10210
GCF_914767665.1	NC_059503	NC_059503.1	Harmonia axyridis chromosome 3; icHarAxyr1.1; whole genome shotgun sequence.	20564812	20812386	11178962	11118896	200	63675256	0.32	0.33	0.18	0.17	0.35	0.9448	0.0087	0.9914	1.9342	1282	1333	2615	12921768	12976818	6905751	6956626	0	39760963	0.33	0.32	0.17	0.18	0.35	0.9091	0.1147	0.8974	1.9184	4496	1140	1109	2249	1209506	958102	676943	754908	3599459	0.33	0.27	0.18	0.21	0.4	0.8745	0.2968	0.7587	1.9283	0	7998506	8217837	4299193	4253630	0	24769166	0.33	0.38	0.15	0.15	0.3	0.8542	0.2277	0.8137	1.8492	0	107	121	228	61493	58892	29431	32247	182063	0.34	0.32	0.16	0.18	0.34	0.87	0.2477	0.7955	1.8967	257021	263038	135333	136278	791670	0.32	0.38	0.14	0.15	0.29	0.8482	0.2535	0.7945	1.8389	47	73	120	1529	2107	2200	2984	8820	0.17	0.24	0.25	0.34	0.59	0.8849	0.3233	0.7307	1.9513	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	29867	32740	16190	18607	16774	20974	16434	30153	13388	18063	36419	44815	23514	9789	17957	24972	18962	15358	23291	26955	17984	14583	13180	30115	20259	14327	14621	26600	23343	21642	20011	18887	11101	28658	24611	15573	11807	8650	16071	10084	12808	4129	55764	8430	11945	20970	7478	31689	16303	18247	9592	5939	21644	15461	15949	20599	10428	4805	6301	6472	31695	13278	18299	10520
GCF_914767665.1	NC_059504	NC_059504.1	Harmonia axyridis chromosome 4; icHarAxyr1.1; whole genome shotgun sequence.	16091513	16063567	8561522	8564701	1300	49282603	0.33	0.33	0.17	0.17	0.35	0.9423	0.0011	0.9989	1.9318	1014	1025	2039	10524705	10589597	5653811	5683920	200	32452233	0.32	0.32	0.17	0.19	0.36	0.9073	0.1181	0.8943	1.918	1341	855	784	1639	918684	724725	510425	573124	2726958	0.33	0.27	0.18	0.21	0.4	0.8751	0.2947	0.7612	1.9289	0	6847761	7044394	3713861	3669277	200	21275493	0.33	0.37	0.15	0.15	0.3	0.8577	0.213	0.825	1.8528	0	95	93	188	51198	49078	23918	26319	150513	0.34	0.32	0.16	0.18	0.34	0.8684	0.2438	0.7957	1.897	104901	108220	53345	53191	319657	0.33	0.39	0.13	0.15	0.28	0.8399	0.2586	0.7916	1.8222	61	127	188	2548	3182	3688	4592	14010	0.19	0.23	0.26	0.33	0.59	0.8758	0.2847	0.7618	1.9518	0	1	1	27	26	31	35	119	0.23	0.22	0.26	0.29	0	0.55	0.8809	0.0795	0.9243	1.9898	22103	24879	12100	14176	12734	15848	12290	22787	10113	13710	28142	34491	17937	7403	13782	18522	14463	11778	17280	20350	13475	11011	9889	22851	15767	10385	10946	19962	17518	16651	14868	14105	8116	21818	18685	11591	9039	6310	12051	7724	9863	3295	42935	6628	9191	16038	5687	23935	12494	14243	7515	4297	16862	11653	12009	15119	7904	3597	4925	4830	23950	9664	13743	8272
GCF_914767665.1	NC_059505	NC_059505.1	Harmonia axyridis chromosome 5; icHarAxyr1.1; whole genome shotgun sequence.	14260755	14274956	7717432	7722283	500	43975926	0.32	0.32	0.18	0.18	0.35	0.9404	0.0008	0.9992	1.935	950	815	1765	9908813	10001123	5406142	5425560	0	30741638	0.32	0.31	0.18	0.19	0.37	0.9085	0.1139	0.8985	1.9223	28324	749	664	1413	814984	645131	468626	517396	2446137	0.33	0.27	0.19	0.22	0.4	0.8756	0.2895	0.7643	1.9319	67	6275060	6457405	3437415	3394164	0	19564044	0.32	0.37	0.15	0.16	0.31	0.8571	0.2305	0.8128	1.8574	0	84	56	140	49740	46281	22591	24624	143236	0.35	0.32	0.16	0.18	0.34	0.8697	0.2446	0.7954	1.8937	194768	203123	105741	103397	607029	0.33	0.39	0.14	0.15	0.29	0.8408	0.2651	0.7851	1.8285	113	86	199	2733	3068	3908	4978	14687	0.19	0.21	0.27	0.34	0.6	0.8843	0.2386	0.7932	1.9528	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	19611	22781	11047	12680	11690	14453	11314	19736	9316	12357	24688	30795	16319	7562	12314	16857	13000	10852	15678	17548	12902	9304	9280	20358	14247	10112	10039	17884	14946	14093	13932	13154	7967	19126	16821	10778	8394	5744	10912	7196	8598	2975	37124	5651	8238	14692	5017	20941	11037	12362	7179	4645	13879	10571	10935	13527	6742	3590	4640	4434	20964	8175	11700	7484
GCF_914767665.1	NC_059506	NC_059506.1	Harmonia axyridis chromosome 6; icHarAxyr1.1; whole genome shotgun sequence.	13081826	13115500	7063807	7075355	2200	40338688	0.32	0.33	0.18	0.18	0.35	0.9283	0.0021	0.9979	1.9345	899	1019	1918	8894062	8911650	4812481	4843665	700	27462558	0.32	0.31	0.18	0.19	0.37	0.9076	0.1243	0.889	1.9255	10946	784	726	1510	777470	598419	441375	492969	2310233	0.33	0.27	0.19	0.22	0.4	0.8753	0.2983	0.7581	1.9303	0	5337328	5482517	2890373	2863358	700	16574276	0.32	0.37	0.15	0.16	0.31	0.8574	0.2313	0.8118	1.859	0	83	149	232	67537	66887	35075	37089	206588	0.33	0.31	0.17	0.19	0.36	0.8739	0.2484	0.7926	1.9098	172720	177854	92350	93358	536282	0.33	0.39	0.14	0.15	0.29	0.8429	0.2564	0.792	1.8306	34	122	156	2002	2761	2955	3697	11415	0.18	0.24	0.26	0.32	0.58	0.882	0.2844	0.7558	1.9596	0	1	1	27	24	32	36	119	0.23	0.2	0.27	0.3	0	0.57	0.8929	0.1176	0.8889	1.9827	18404	22658	9851	11704	10598	14173	10197	18058	8773	11745	22839	29546	14721	6867	10913	16303	12161	10119	14794	16435	11870	9236	8633	18814	13535	9388	9523	16964	13916	13807	12953	12032	7145	18042	15470	10519	7871	5806	10216	6836	8293	2991	36865	5594	7632	12855	5142	20681	9883	11163	6833	3927	12800	9994	10845	12748	6437	3433	4530	4707	20117	7794	11316	7786
GCF_914767665.1	NC_059507	NC_059507.1	Harmonia axyridis chromosome 7; icHarAxyr1.1; whole genome shotgun sequence.	12056827	12026572	6517089	6525909	1200	37127597	0.32	0.32	0.18	0.18	0.35	0.9397	0.0019	0.9981	1.9352	757	841	1598	7833370	7864472	4250845	4292248	1200	24242135	0.33	0.32	0.17	0.18	0.35	0.9092	0.1073	0.9034	1.9196	6429	657	720	1377	736585	577644	416325	458677	2189231	0.33	0.27	0.18	0.21	0.4	0.8749	0.294	0.7615	1.9295	0	4991741	5131682	2723223	2706941	1200	15554787	0.33	0.37	0.15	0.15	0.3	0.8597	0.2131	0.8243	1.857	0	79	86	165	49747	47330	23838	26239	147154	0.34	0.32	0.16	0.18	0.35	0.8715	0.2437	0.7933	1.9	153169	155794	80297	80232	469492	0.33	0.38	0.14	0.15	0.29	0.8468	0.2338	0.8065	1.8442	20	16	36	488	584	680	888	2640	0.19	0.22	0.26	0.34	0.59	0.8863	0.2671	0.7726	1.9553	0	1	1	28	25	32	34	119	0.24	0.21	0.27	0.29	0	0.55	0.8809	0.0869	0.917	1.99	17711	20116	9633	11685	10454	12992	10143	17954	8221	10619	22517	28067	14511	6145	10867	15336	11770	9383	14133	15882	10920	9079	8021	18636	12807	8688	9092	16245	13719	13520	11844	11247	6464	17268	15039	9739	7518	5207	9734	6140	7690	2347	34218	5212	7028	13130	4564	18467	9616	11331	6122	3542	12979	9993	9493	12724	5684	2880	3997	3950	19732	7325	10011	6570
GCF_914767665.1	NC_059508	NC_059508.1	Harmonia axyridis chromosome X; icHarAxyr1.1; whole genome shotgun sequence.	11881282	12044234	7330413	7311276	29100	38596305	0.31	0.31	0.19	0.19	0.38	0.9414	0.0081	0.9919	1.9574	1277	1220	2497	5339223	5369283	3055098	3179850	200	16943654	0.27	0.26	0.22	0.25	0.47	0.9143	0.1026	0.9064	1.9655	7148	456	388	844	490055	395876	277541	303702	1467174	0.33	0.27	0.18	0.21	0.39	0.8753	0.2819	0.7696	1.9318	653	3108218	3191205	1661577	1647439	200	9608639	0.32	0.38	0.14	0.15	0.29	0.8435	0.2587	0.7907	1.8389	0	48	35	83	34834	33205	16752	18638	103429	0.34	0.31	0.16	0.19	0.35	0.8734	0.2491	0.7936	1.9053	143423	147259	76793	76108	443583	0.32	0.38	0.15	0.15	0.3	0.8567	0.2504	0.7927	1.8483	3	3	6	66	119	95	156	436	0.15	0.27	0.22	0.36	0.58	0.8695	0.5312	0.5896	1.9249	770	786	1556	473518	478049	472288	573752	1997607	0.24	0.23	0.26	0.28	0	0.54	0.9169	0.0941	0.9127	1.9913	12050	12729	6643	8010	7298	7956	6952	12488	5495	7521	15354	18126	9919	3947	7500	9820	7819	6203	9361	10814	7565	6060	5237	12416	8401	5627	6136	11017	9832	8411	7996	7852	4413	11698	10499	6245	4987	3236	6315	4067	5163	1795	22050	3485	4908	8932	2807	12152	6798	7753	4026	2174	9327	6552	6003	8253	4019	1758	2487	3009	13411	5274	7096	4331