GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_N Number of 'N' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	fr_tRNA_N Frequency of 'N' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_016086655.2	NC_052131	NC_052131.1	Lepeophtheirus salmonis isolate Lsal2020 chromosome 1; UVic_Lsal_1.1; whole genome shotgun sequence.	19303268	19294309	8693662	8704373	5000	56000612	0.34	0.34	0.16	0.16	0.31	0.9396	0.0008	0.9992	1.8939	1081	1147	2228	5667520	5741756	2660312	2660813	300	16730701	0.33	0.33	0.17	0.17	0.34	0.9081	0.0947	0.9127	1.9189	10116	819	878	1697	814934	733656	503592	518587	2570769	0.32	0.29	0.19	0.21	0.4	0.8796	0.2579	0.7885	1.9387	37	2685235	2787848	1181900	1176345	200	7831528	0.33	0.41	0.13	0.13	0	0.26	0.8272	0.3084	0.7565	1.7924	94870	219	202	421	167863	163760	83396	84427	499446	0.34	0.32	0.17	0.18	0	0.34	0.8716	0.238	0.804	1.9001	0	325708	338362	145150	143881	953101	0.33	0.4	0.14	0.13	0	0.27	0.8326	0.2537	0.7926	1.8131	10	9	19	254	303	382	467	1406	0.18	0.22	0.27	0.33	0	0.6	0.8853	0.1982	0.825	1.9554	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	20968	22782	9798	14807	10390	18588	12155	25749	15414	12370	27856	28605	18763	6934	12999	13961	19559	10002	15539	23763	9100	9117	15360	22987	9779	7515	10310	16964	17479	19581	16047	17911	9786	16154	14908	10878	7215	7701	10068	7186	7778	3100	36129	5534	7390	15073	6804	16602	11789	15630	6397	3169	16482	13703	9004	12312	4984	3769	3600	6745	23812	9396	10436	8242
GCF_016086655.2	NC_052132	NC_052132.1	Lepeophtheirus salmonis isolate Lsal2020 chromosome 2; UVic_Lsal_1.1; whole genome shotgun sequence.	14315973	14321206	6348205	6344954	4400	41334738	0.35	0.35	0.15	0.15	0.31	0.9404	0.0004	0.9996	1.8898	412	457	869	3678622	3718418	1658213	1666530	0	10721783	0.33	0.33	0.17	0.17	0.34	0.9074	0.0951	0.913	1.9137	5014	283	331	614	286414	256722	174432	183354	900922	0.32	0.29	0.19	0.2	0.39	0.8788	0.2624	0.7853	1.9333	602	2107681	2151147	911975	910084	0	6080887	0.33	0.4	0.13	0.13	0	0.27	0.8349	0.2704	0.7848	1.7997	0	97	91	188	69265	68888	34679	34385	207217	0.33	0.33	0.17	0.17	0	0.34	0.8754	0.2005	0.8295	1.9014	0	138663	141737	56798	58099	395297	0.33	0.41	0.13	0.13	0	0.26	0.822	0.3113	0.7511	1.7814	6	5	11	160	165	231	255	811	0.2	0.2	0.29	0.31	0	0.6	0.8856	0.1028	0.9041	1.9643	0	11	11	5000	5046	3835	4992	18873	0.26	0.26	0.21	0.27	0	0.48	0.9097	0.1489	0.8667	1.9918	7543	7820	3559	5137	3913	5958	4542	9099	4940	4284	9950	10512	6481	2599	4581	4885	6321	3834	5225	8457	3340	3288	4932	8365	3337	2518	3567	6144	6188	6982	5704	6087	3390	5854	5201	3936	2493	2688	3600	2563	2539	1130	12907	1999	2478	5425	2360	5685	3931	5419	2304	1184	5865	4935	3104	4524	1757	1407	1344	2219	7819	3116	3480	2866
GCF_016086655.2	NC_052133	NC_052133.1	Lepeophtheirus salmonis isolate Lsal2020 chromosome 3; UVic_Lsal_1.1; whole genome shotgun sequence.	17640406	17611434	7784492	7781760	2500	50820592	0.35	0.35	0.15	0.15	0.31	0.9399	0.001	0.999	1.8888	734	713	1447	4959260	5022156	2253271	2260878	300	14495865	0.33	0.33	0.17	0.17	0.34	0.9066	0.1027	0.9068	1.9171	12929	541	531	1072	529238	469833	319347	335376	1653794	0.32	0.29	0.19	0.21	0.39	0.8789	0.2635	0.7841	1.9362	0	2838894	2924783	1227578	1221334	0	8212589	0.33	0.4	0.14	0.13	0	0.27	0.8346	0.2826	0.7762	1.7982	0	156	134	290	99107	97132	49761	48860	294860	0.33	0.33	0.17	0.17	0	0.34	0.8732	0.2047	0.827	1.9007	2	164758	168555	70467	69363	473143	0.34	0.4	0.13	0.13	0	0.27	0.8297	0.2707	0.7808	1.8028	10	18	28	391	494	554	647	2086	0.19	0.24	0.27	0.31	0	0.58	0.8887	0.2172	0.808	1.9716	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	13664	14518	6285	9190	6776	11683	7722	16231	9593	7909	18616	19146	12049	4485	8447	8999	12155	6630	9889	15076	5940	5790	9338	15381	6344	4595	6563	11310	11322	12299	10337	11068	5981	10757	9438	7147	4687	4812	6136	4595	4758	2105	24486	3716	4670	9572	4496	10713	7546	10196	4225	2159	10820	8634	5685	8096	3362	2523	2505	4179	14504	5991	6855	5262
GCF_016086655.2	NC_052134	NC_052134.1	Lepeophtheirus salmonis isolate Lsal2020 chromosome 4; UVic_Lsal_1.1; whole genome shotgun sequence.	18626356	18615451	8175890	8183428	3300	53604425	0.35	0.35	0.15	0.15	0.31	0.9396	0.0008	0.9992	1.8875	653	671	1324	4804025	4866892	2180737	2173229	200	14025083	0.33	0.33	0.17	0.17	0.34	0.9067	0.1006	0.9094	1.9137	3376	467	503	970	453784	404711	278841	285410	1422746	0.32	0.29	0.19	0.2	0.39	0.8756	0.2706	0.7797	1.9323	1	2645793	2721263	1150562	1141436	200	7659254	0.33	0.4	0.13	0.13	0	0.27	0.8354	0.2742	0.782	1.7976	0	153	138	291	116634	114017	59169	58775	348595	0.34	0.32	0.17	0.17	0	0.34	0.8771	0.2025	0.8272	1.9035	0	241935	245949	100335	99540	687759	0.33	0.4	0.14	0.13	0	0.27	0.8252	0.3	0.76	1.8007	5	4	9	135	146	178	212	671	0.2	0.22	0.27	0.32	0	0.58	0.8894	0.1473	0.8645	1.9722	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	11786	13108	5493	8147	5947	9267	7251	13668	8079	6942	15128	16041	10728	3694	6849	7688	10199	5653	8510	13005	5637	4893	7880	12986	5476	4113	5719	9777	10038	10680	8654	9322	5255	9396	8546	5752	4217	4288	6111	3928	4212	1618	20444	2984	4094	8503	3655	8911	6087	8856	3619	1701	9374	7919	5018	7728	2872	2084	2117	3460	12593	5310	5689	4345
GCF_016086655.2	NC_052135	NC_052135.1	Lepeophtheirus salmonis isolate Lsal2020 chromosome 5; UVic_Lsal_1.1; whole genome shotgun sequence.	25585542	25617894	11147847	11137194	3800	73492277	0.35	0.35	0.15	0.15	0.3	0.9407	0.0011	0.9989	1.8852	984	887	1871	6439038	6513269	2893630	2903370	0	18749307	0.33	0.33	0.17	0.17	0.34	0.9076	0.0966	0.9115	1.912	43026	734	647	1381	716589	638326	427210	445999	2228124	0.32	0.29	0.19	0.2	0.39	0.8796	0.2535	0.7909	1.9364	16	3780945	3889032	1607018	1596411	0	10873406	0.33	0.41	0.13	0.13	0	0.26	0.8318	0.2888	0.771	1.7925	0	192	200	392	159912	156338	78368	79892	474510	0.34	0.32	0.17	0.17	0	0.34	0.8762	0.2076	0.8246	1.8961	2	212621	219616	90511	90143	612891	0.34	0.4	0.13	0.13	0	0.26	0.825	0.2875	0.7686	1.7955	7	9	16	243	288	302	372	1205	0.2	0.24	0.25	0.31	0	0.56	0.8852	0.1871	0.8345	1.9767	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	18722	19319	8477	12714	9001	14798	11061	22469	11862	10529	25041	25763	16359	5688	11526	12387	16267	8705	13353	20672	8042	7909	12118	20857	8530	6210	9043	15055	15192	16213	13817	15459	7943	14698	12870	9439	6390	6147	8532	5837	6814	2606	33359	4806	6104	13516	5600	14806	10004	13854	5449	2788	15016	12126	7576	11071	4435	3153	3278	5681	19434	8391	9196	6905
GCF_016086655.2	NC_052136	NC_052136.1	Lepeophtheirus salmonis isolate Lsal2020 chromosome 6; UVic_Lsal_1.1; whole genome shotgun sequence.	20625772	20627266	9136191	9149911	3700	59542840	0.35	0.35	0.15	0.15	0.31	0.9404	0.0008	0.9992	1.8898	869	895	1764	5887298	5962235	2692279	2695446	100	17237358	0.33	0.33	0.17	0.17	0.34	0.9082	0.094	0.9141	1.914	5404	640	652	1292	633876	560097	383308	399543	1976824	0.32	0.28	0.19	0.21	0.4	0.8787	0.2579	0.7877	1.9365	0	3098613	3197677	1350680	1345508	100	8992578	0.33	0.4	0.13	0.13	0	0.27	0.8356	0.2755	0.7802	1.8004	0	186	199	385	161701	157916	81373	80544	481534	0.34	0.32	0.17	0.17	0	0.34	0.876	0.2049	0.8256	1.904	0	323198	332265	141382	140349	937194	0.33	0.4	0.14	0.13	0	0.27	0.8289	0.2914	0.7671	1.808	6	10	16	236	267	327	381	1211	0.19	0.22	0.27	0.32	0	0.59	0.8905	0.1489	0.8661	1.9687	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	16794	18109	7503	11103	7840	13597	9165	19195	10978	9622	21462	22728	14031	5363	9945	11213	14120	8082	11708	17945	7788	6615	11307	17536	8033	5785	7941	13776	13221	14402	12263	13334	7495	12934	11439	8734	5966	5928	7610	5273	5872	2378	29615	4272	5815	11635	5072	12708	9388	11987	4831	2404	12807	10470	6787	9640	4040	3015	2894	4808	17506	7198	8175	6210
GCF_016086655.2	NC_052137	NC_052137.1	Lepeophtheirus salmonis isolate Lsal2020 chromosome 7; UVic_Lsal_1.1; whole genome shotgun sequence.	14524576	14520832	6532782	6544462	2501	42125153	0.34	0.34	0.16	0.16	0.31	0.9406	0.001	0.999	1.8937	515	513	1028	4143976	4185892	1898118	1897409	1	12125396	0.33	0.33	0.17	0.17	0.34	0.9072	0.0964	0.9121	1.9148	3497	377	375	752	376480	335153	226386	232650	1170669	0.32	0.29	0.19	0.2	0.39	0.8798	0.2549	0.789	1.9368	0	2515834	2572610	1103272	1097597	1	7289314	0.33	0.4	0.13	0.13	0	0.27	0.8373	0.2733	0.7831	1.8007	0	97	109	206	80269	78211	40415	40846	239741	0.34	0.32	0.17	0.17	0	0.34	0.8762	0.201	0.8279	1.9037	0	119178	123272	52453	52013	346916	0.33	0.4	0.14	0.13	0	0.27	0.8267	0.3125	0.7537	1.8002	16	15	31	440	489	602	718	2249	0.2	0.22	0.27	0.32	0	0.59	0.8951	0.1405	0.8746	1.9696	3	0	3	1499	1510	1149	1495	5653	0.26	0.26	0.21	0.27	0	0.48	0.9116	0.1468	0.8687	1.9918	9535	10453	4380	6555	4711	7596	5539	11757	6822	5544	13083	13475	8880	2997	6076	6458	8996	4255	6933	10822	4071	4099	6273	10779	4403	3359	4523	7851	8364	8713	7151	7702	4192	7641	6971	5033	3297	3425	4577	3064	3607	1360	17414	2510	3396	6983	3005	7550	5527	7221	2948	1363	7938	6462	3965	6002	2296	1646	1702	2872	10477	4386	4779	3568
GCF_016086655.2	NC_052138	NC_052138.1	Lepeophtheirus salmonis isolate Lsal2020 chromosome 8; UVic_Lsal_1.1; whole genome shotgun sequence.	13480446	13495332	6088083	6092324	6200	39162385	0.34	0.34	0.16	0.16	0.31	0.9404	0.0009	0.9991	1.8943	646	688	1334	3232604	3270362	1535931	1529141	100	9568138	0.32	0.32	0.18	0.18	0.35	0.9056	0.1151	0.8969	1.9229	4111	486	500	986	433682	389151	273981	275407	1372221	0.32	0.28	0.19	0.21	0.4	0.8802	0.2844	0.7741	1.9289	9	1654555	1709203	735722	731023	100	4830603	0.33	0.41	0.14	0.13	0	0.27	0.8291	0.3016	0.7615	1.797	0	103	138	241	76830	74197	38543	39108	228678	0.33	0.32	0.17	0.17	0	0.34	0.8702	0.2347	0.8046	1.9034	0	129241	135599	59323	58156	382319	0.33	0.4	0.14	0.13	0	0.27	0.8229	0.3033	0.7556	1.7955	15	16	31	448	529	597	697	2271	0.2	0.23	0.26	0.31	0	0.57	0.8901	0.1639	0.8543	1.9766	0	1	1	33	32	25	29	119	0.28	0.27	0.21	0.24	0	0.45	0.8809	0.0895	0.9159	1.9919	11632	12672	5164	7823	5672	9462	7556	13075	8211	6332	14477	15289	9654	3829	6949	7409	10180	5609	8084	12247	5200	4470	7907	11904	5350	4359	5582	9392	9352	9908	8676	9504	5379	8857	7883	5753	4045	4350	6021	4349	4032	1712	19456	2821	3940	8180	3423	8472	5843	8216	3503	1769	8805	7698	4778	7230	2591	1989	2010	3530	12201	4946	5497	4210
GCF_016086655.2	NC_052139	NC_052139.1	Lepeophtheirus salmonis isolate Lsal2020 chromosome 9; UVic_Lsal_1.1; whole genome shotgun sequence.	10965861	10974428	4959861	4973241	6400	31879791	0.34	0.34	0.16	0.16	0.31	0.9397	0.0017	0.9983	1.895	521	520	1041	2597256	2616926	1210291	1219018	0	7643491	0.32	0.33	0.17	0.18	0.35	0.9041	0.1117	0.8988	1.9203	7443	360	356	716	351373	309076	211031	220288	1091768	0.32	0.28	0.19	0.2	0.39	0.8776	0.2638	0.7846	1.9337	0	1288175	1323373	567490	564753	0	3743791	0.33	0.4	0.14	0.13	0	0.27	0.8275	0.3048	0.7596	1.7958	0	135	137	272	70666	70806	35157	36411	213040	0.33	0.32	0.16	0.18	0	0.35	0.8677	0.2634	0.7849	1.8991	0	96496	103831	40865	42495	283687	0.33	0.4	0.13	0.14	0	0.27	0.8368	0.2709	0.7782	1.8091	14	6	20	261	346	396	446	1449	0.18	0.24	0.27	0.31	0	0.58	0.8941	0.2034	0.8193	1.9711	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	9484	10375	4190	5914	4301	7443	5072	10688	6211	5183	11767	12278	8048	2941	5559	5882	7809	4325	6585	9856	4471	3934	6211	9863	4482	3131	4533	7424	7372	7995	6723	7563	3860	7343	6547	4682	3086	3134	4130	2870	3310	1227	16082	2198	3113	6106	2768	7069	4626	6288	2682	1368	7310	5787	4036	5443	2306	1671	1631	2611	10026	3984	4727	3500
GCF_016086655.2	NC_052140	NC_052140.1	Lepeophtheirus salmonis isolate Lsal2020 chromosome 10; UVic_Lsal_1.1; whole genome shotgun sequence.	8297453	8284752	3864418	3865994	4000	24316617	0.34	0.34	0.16	0.16	0.32	0.9414	0.001	0.999	1.9021	304	336	640	2027481	2050882	969579	971453	100	6019495	0.33	0.33	0.17	0.17	0.35	0.9079	0.0996	0.9093	1.9203	2749	235	239	474	211034	184818	131991	133670	661513	0.32	0.28	0.19	0.2	0.4	0.8792	0.2641	0.7841	1.9359	0	1098885	1129448	501382	499061	0	3228776	0.33	0.4	0.14	0.14	0	0.27	0.8422	0.2577	0.7947	1.8123	0	56	87	143	50614	50810	25850	26831	154105	0.32	0.33	0.16	0.19	0	0.35	0.8754	0.2243	0.8142	1.9081	0	100098	104913	46246	47942	299199	0.32	0.41	0.13	0.14	0	0.27	0.8213	0.3424	0.7301	1.7962	3	0	3	44	50	65	85	244	0.18	0.2	0.27	0.35	0	0.62	0.8765	0.1974	0.8232	1.9511	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5156	6126	2318	3686	2596	4831	3477	6364	3952	3055	7122	8085	4727	1787	3299	3723	4794	2457	3828	5908	2313	2329	3674	6125	2384	2073	2511	4124	4494	4870	3965	4382	2574	3995	3596	2919	2107	2296	2814	1951	1950	850	9613	1419	2037	3887	1621	4492	3179	4067	1660	867	4064	3685	2167	3542	1173	1069	1043	1868	6125	2170	2519	2139
GCF_016086655.2	NC_052141	NC_052141.1	Lepeophtheirus salmonis isolate Lsal2020 chromosome 11; UVic_Lsal_1.1; whole genome shotgun sequence.	7624063	7622131	3599737	3599471	5400	22450802	0.34	0.34	0.16	0.16	0.32	0.9416	0.0002	0.9998	1.9051	344	373	717	1891782	1911832	929500	930973	0	5664087	0.32	0.32	0.18	0.18	0.36	0.9091	0.1037	0.9052	1.9289	2680	263	281	544	255574	232719	162523	167010	817826	0.32	0.29	0.19	0.21	0.4	0.8798	0.2648	0.7853	1.936	4	1157958	1191738	542500	541121	0	3433317	0.33	0.4	0.14	0.13	0	0.27	0.8322	0.2985	0.7646	1.8071	0	59	57	116	44897	43202	22270	22981	133350	0.34	0.32	0.17	0.17	0	0.34	0.8728	0.2274	0.8078	1.8984	0	18862	20175	8426	8377	55840	0.34	0.4	0.13	0.13	0	0.25	0.8168	0.3255	0.7412	1.777	11	23	34	495	617	616	749	2477	0.2	0.25	0.25	0.3	0	0.55	0.9053	0.207	0.8166	1.98	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	6723	7202	2873	4400	3099	5905	3556	7896	5262	4149	8493	8567	5657	2336	4188	4600	6082	3494	5068	7607	3094	2740	5131	6873	3138	2499	3277	5479	5653	6458	5376	5574	3230	4845	4591	3584	2305	2541	3326	2308	2376	1067	11483	1795	2692	4649	2329	5382	4022	4871	2129	1077	4918	4388	2853	3997	1567	1369	1283	2144	7312	3065	3533	2582
GCF_016086655.2	NC_052142	NC_052142.1	Lepeophtheirus salmonis isolate Lsal2020 chromosome 12; UVic_Lsal_1.1; whole genome shotgun sequence.	4675902	4663625	2096604	2102098	1700	13539929	0.35	0.34	0.15	0.16	0.31	0.9373	0.0026	0.9974	1.8933	365	329	694	3201222	3221886	1436248	1453975	0	9313331	0.34	0.34	0.16	0.16	0.32	0.907	0.0862	0.921	1.8951	15373	137	128	265	153827	140298	78056	88386	460567	0.34	0.3	0.16	0.2	0.36	0.8695	0.2776	0.7737	1.9025	0	1930749	1956213	856603	860607	0	5604172	0.34	0.4	0.12	0.14	0	0.26	0.8273	0.2536	0.8037	1.7783	0	235	206	441	320993	311038	149234	153212	934477	0.35	0.33	0.16	0.17	0	0.33	0.8764	0.2062	0.8276	1.8898	0	213273	220752	94219	93601	621845	0.33	0.4	0.13	0.13	0	0.26	0.8169	0.2972	0.7607	1.7939	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3878	3704	2097	2513	1709	2282	1898	5331	1668	2184	6021	5159	3454	975	2387	2530	3178	1935	2836	4944	1770	1730	1677	4114	1802	1099	1970	3230	3875	2863	2595	2870	1362	4131	2792	1606	1244	808	1900	829	1232	488	7360	972	1352	2999	1173	2932	2561	2823	1177	542	4134	1871	1371	1867	1221	585	599	1127	4078	2451	1998	1232
GCF_016086655.2	NC_052143	NC_052143.1	Lepeophtheirus salmonis isolate Lsal2020 chromosome 13; UVic_Lsal_1.1; whole genome shotgun sequence.	16804325	16791426	7428554	7428331	4801	48457437	0.35	0.35	0.15	0.15	0.31	0.9394	0.0004	0.9996	1.8892	660	615	1275	4126046	4190778	1894440	1890592	0	12101856	0.33	0.33	0.17	0.17	0.34	0.9066	0.0966	0.912	1.9121	50070	479	448	927	433992	391073	267034	273835	1365934	0.32	0.29	0.19	0.21	0.39	0.8741	0.2718	0.7789	1.9334	0	2417062	2492778	1056608	1051633	0	7018081	0.33	0.41	0.13	0.13	0	0.26	0.8299	0.2925	0.7679	1.7932	0	150	139	289	100463	96705	49209	49590	295967	0.34	0.32	0.17	0.17	0	0.34	0.8735	0.2111	0.8211	1.8994	189	189979	194515	82283	81912	548689	0.33	0.4	0.13	0.13	0	0.26	0.8229	0.3031	0.7587	1.7911	6	4	10	143	167	208	243	761	0.19	0.22	0.27	0.32	0	0.59	0.8849	0.1744	0.8473	1.9619	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	11573	11892	5629	7644	5800	9178	6801	13153	7651	6331	14957	15230	9891	3740	6869	7286	9979	5819	8022	12610	5451	4808	7446	12071	5461	3944	5750	9091	9853	9991	8587	9674	5214	9088	7903	5609	4061	3945	5734	3786	3863	1693	19332	2947	3576	8159	3309	8617	5963	8856	3431	1824	8870	7456	4452	6899	2796	2022	1975	3466	12171	4995	5484	4507
GCF_016086655.2	NC_052144	NC_052144.1	Lepeophtheirus salmonis isolate Lsal2020 chromosome 14; UVic_Lsal_1.1; whole genome shotgun sequence.	15374376	15382453	6766372	6762926	4701	44290828	0.35	0.35	0.15	0.15	0.31	0.9394	0.0005	0.9995	1.8879	505	534	1039	4270505	4308552	1917824	1913114	101	12410096	0.32	0.33	0.18	0.17	0.36	0.9034	0.1229	0.8914	1.9191	1410	383	419	802	315080	287158	204601	201707	1008546	0.32	0.29	0.19	0.2	0.4	0.8774	0.2702	0.7808	1.9343	4	2589686	2639597	1121600	1120379	101	7471363	0.33	0.4	0.14	0.13	0	0.27	0.8397	0.2674	0.7877	1.8017	0	99	88	187	74446	74030	37213	36844	222533	0.33	0.33	0.17	0.17	0	0.34	0.8749	0.211	0.8211	1.9011	0	186237	194369	80497	79863	540966	0.32	0.4	0.14	0.13	0	0.27	0.8332	0.2966	0.7639	1.8081	9	11	20	251	350	400	465	1466	0.17	0.24	0.27	0.32	0	0.59	0.8999	0.2429	0.79	1.9634	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8170	8492	3921	5605	4332	6596	6342	9509	5864	4528	10391	10953	7439	2651	5193	5378	7475	4003	6103	9018	3949	3966	5685	8623	3822	2936	4025	6578	7433	8177	6177	6851	3772	6396	5781	4152	3052	3255	4398	3106	2958	1164	13802	2087	2647	6155	2505	6047	4274	6569	2586	1203	6363	6463	3208	6424	1899	1436	1545	2443	9050	3498	3861	3010
GCF_016086655.2	NC_052145	NC_052145.1	Lepeophtheirus salmonis isolate Lsal2020 chromosome 15; UVic_Lsal_1.1; whole genome shotgun sequence.	8297734	8292625	3814148	3820002	1900	24226409	0.34	0.34	0.16	0.16	0.32	0.9415	0.0011	0.9989	1.899	270	284	554	1903566	1929536	904086	896391	200	5633779	0.32	0.33	0.18	0.17	0.35	0.9065	0.095	0.9142	1.9181	2147	202	204	406	166867	153644	107639	107312	535462	0.32	0.29	0.19	0.2	0.39	0.8799	0.2757	0.7804	1.9271	0	1007280	1031164	458530	455629	0	2952603	0.33	0.39	0.14	0.14	0	0.28	0.8464	0.2451	0.8028	1.8213	0	56	57	113	41006	40629	19820	20183	121638	0.34	0.32	0.16	0.18	0	0.34	0.8724	0.2207	0.8189	1.8845	0	84999	86647	37737	37461	246844	0.33	0.4	0.14	0.13	0	0.27	0.8359	0.2765	0.7753	1.8095	2	7	9	119	161	175	206	661	0.18	0.24	0.26	0.31	0	0.58	0.898	0.2307	0.7957	1.9727	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4089	4727	1815	2875	2094	3524	3164	5153	3364	2529	5394	5790	3942	1448	2969	3015	4438	1960	3586	4882	1972	2013	2968	4596	1841	1601	2074	3693	3654	4256	3273	3364	2147	3363	3212	2253	1779	1834	2415	1632	1785	724	7464	1067	1758	3380	1350	3156	2643	3682	1227	621	3234	2681	1727	2705	976	829	786	1286	4639	1912	2157	1580
NA	NC_007215	NC_007215.1	Lepeophtheirus salmonis mitochondrion; complete genome.	5012	5065	2174	3194	0	15445	0.32	0.33	0.14	0.21	0.35	0.9138	0.1953	0.8351	1.9227	9	3	12	2847	4023	1729	2219	0	10818	0.26	0.38	0.15	0.21	0.36	0.8874	0.4072	0.6719	1.9085	5	3	2	5	931	1346	619	779	3675	0.26	0.37	0.17	0.2	0.37	0.8868	0.3762	0.6926	1.9226	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5	2	7	153	139	69	67	428	0.35	0.33	0.16	0.16	0	0.32	0.8198	0.2557	0.7931	1.872	1	0	1	372	344	144	149	1009	0.37	0.34	0.14	0.15	0	0.29	0.8987	0.0562	0.9456	1.8684	21	7	33	25	11	18	37	57	14	12	19	19	13	3	11	12	27	20	19	78	9	16	7	17	8	11	31	23	28	24	18	34	10	29	21	10	12	7	19	9	9	3	16	17	2	32	44	40	14	22	7	5	93	34	21	11	2	5	2	1	12	3	26	5