GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	fr_chromo_N Frequency of 'N' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_N Number of 'N' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_N Number of 'N' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_N Number of 'N' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	fr_tRNA_N Frequency of 'N' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_022045245.1	NC_060949	NC_060949.1	Lucilia cuprina isolate Lc7/37 chromosome X; ASM2204524v1; whole genome shotgun sequence.	5734967	5733037	2460146	2460470	96577	16485197	0.35	0.35	0.15	0.15	0.01	0.3	0.9219	0.0002	0.9998	1.879	134	127	261	1972772	1951637	843096	836730	22067	5626302	0.36	0.33	0.16	0.16	0.32	0.9008	0.1285	0.8866	1.8877	55	103	98	201	109468	85857	61796	58776	0	315897	0.35	0.28	0.18	0.2	0.38	0.8729	0.3017	0.7574	1.9142	0	1282203	1286935	539186	535032	15067	3658423	0.36	0.39	0.12	0.13	0.01	0.24	0.8403	0.2078	0.8294	1.7739	0	27	28	55	17100	14367	7528	7012	46007	0.37	0.3	0.16	0.16	0.33	0.8536	0.3213	0.743	1.864	67917	69847	29630	29807	800	198001	0.36	0.41	0.11	0.12	0.23	0.8004	0.3289	0.7438	1.7276	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2697	2129	1647	1808	1824	1249	1591	3062	1044	1193	4657	3557	2287	971	1663	2478	1697	1260	1214	2521	1194	1392	839	2619	1755	1070	1445	2040	2120	1236	1374	1487	887	2874	2864	1161	1192	720	1196	968	1219	641	5156	839	980	1998	396	1401	1308	2183	1012	649	2814	1186	702	1930	559	484	703	1065	3857	1269	839	933
GCF_022045245.1	NC_060950	NC_060950.1	Lucilia cuprina isolate Lc7/37 chromosome 2; ASM2204524v1; whole genome shotgun sequence.	24932095	24938733	10539396	10507707	430000	71347931	0.35	0.35	0.15	0.15	0.01	0.29	0.9316	0.0016	0.9984	1.8747	1333	1280	2613	12108602	12022744	5149151	5149978	135498	34565973	0.34	0.33	0.16	0.17	0.33	0.8966	0.1283	0.8854	1.8949	38914	1105	1083	2188	1202685	1035609	707090	724499	3	3669886	0.33	0.29	0.18	0.2	0.38	0.8763	0.2751	0.7763	1.9209	0	6670928	6789874	2732835	2712196	88111	18993944	0.35	0.41	0.11	0.13	0	0.24	0.8133	0.3308	0.7461	1.7491	0	102	87	189	56574	48549	23171	23764	152058	0.37	0.32	0.15	0.16	0.31	0.851	0.2928	0.7623	1.8414	475995	480786	190795	193289	6299	1347164	0.35	0.39	0.12	0.13	0.25	0.8291	0.258	0.7955	1.7794	84	65	149	1995	2494	2883	3570	10942	0.18	0.23	0.26	0.33	0	0.59	0.8842	0.2393	0.7949	1.9529	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	32157	25118	18137	18694	17989	15234	20125	33830	12113	19509	47464	40154	21449	10172	18105	24113	16999	17359	16306	33135	13428	20570	10108	31826	17449	15358	16075	28557	28329	12654	17713	16455	11250	30482	28463	10537	13651	11172	16392	15625	12116	7282	55128	11960	12968	22939	5015	18368	17530	22112	11490	6374	32174	13889	8916	20131	8528	5875	8681	15211	38515	17691	14267	9244
GCF_022045245.1	NC_060951	NC_060951.1	Lucilia cuprina isolate Lc7/37 chromosome 3; ASM2204524v1; whole genome shotgun sequence.	23952345	23950941	9736879	9752775	304059	67696999	0.35	0.35	0.14	0.14	0	0.29	0.9318	0.0008	0.9992	1.8658	1451	1516	2967	13759224	13670635	5619118	5630620	117972	38797569	0.34	0.33	0.16	0.17	0.33	0.8959	0.1239	0.8887	1.8921	48315	1246	1270	2516	1393129	1178143	812401	838430	100	4222203	0.33	0.29	0.18	0.2	0.38	0.8749	0.2775	0.7749	1.9204	1072	6036581	6149505	2364642	2342100	65549	16958377	0.35	0.41	0.11	0.12	0	0.24	0.8107	0.3357	0.7426	1.7422	0	100	110	210	71474	62468	28554	29396	191892	0.37	0.32	0.15	0.16	0.31	0.8445	0.3231	0.7459	1.8397	1197347	1232752	469128	474356	8071	3381654	0.35	0.39	0.12	0.13	0.26	0.8369	0.2503	0.8014	1.7862	66	99	165	2319	2770	3114	3871	12074	0.2	0.23	0.25	0.32	0	0.57	0.8956	0.2405	0.792	1.9656	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	36511	29130	20753	21242	21361	18287	23727	37718	14352	21101	55387	48567	24538	11601	21537	27052	19317	20459	17446	37651	15454	23921	11187	38002	20182	17328	18332	32414	31482	15132	19127	17871	12384	35037	33097	12221	15311	13280	17354	18336	14309	8571	65588	14249	14816	25901	5361	21428	20858	25622	12877	7335	37507	16806	10171	23681	9532	6583	10048	17867	44691	19536	15700	10192
GCF_022045245.1	NC_060952	NC_060952.1	Lucilia cuprina isolate Lc7/37 chromosome 4; ASM2204524v1; whole genome shotgun sequence.	36004073	36043521	14678273	14686976	349561	101762404	0.35	0.35	0.14	0.14	0	0.29	0.9302	0.0008	0.9992	1.8667	1818	1887	3705	19155854	19027564	7787105	7791836	136533	53898892	0.35	0.33	0.15	0.16	0.32	0.898	0.1173	0.8942	1.8881	31424	1585	1675	3260	1803114	1527178	1033667	1070856	137	5434952	0.33	0.29	0.18	0.2	0.38	0.8749	0.275	0.7761	1.9211	607	10380956	10581921	4063177	4039511	95549	29161114	0.36	0.41	0.11	0.12	0	0.23	0.8137	0.3185	0.7543	1.7409	6035	140	125	265	95944	82812	38715	40011	257482	0.37	0.32	0.15	0.16	0.31	0.8506	0.3053	0.7534	1.8463	980340	991583	380481	379599	8258	2740261	0.35	0.4	0.12	0.13	0.25	0.8335	0.2632	0.7909	1.7737	68	48	116	1708	1981	2188	2787	8664	0.2	0.23	0.25	0.32	0	0.57	0.8875	0.2313	0.7996	1.9672	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	48052	37162	26332	27005	27138	21736	30394	51266	17675	27641	71631	58802	32927	15616	27161	35950	23824	25176	23609	49963	19781	30063	13764	46850	26319	21945	22974	41602	41661	20273	25390	22695	15725	45408	43203	15745	19123	15946	24015	22304	18674	10532	84334	18038	19318	33708	7396	28216	26325	32560	17385	9487	47641	19593	12817	30238	12606	8359	12260	21991	58241	27663	22120	13912
GCF_022045245.1	NC_060953	NC_060953.1	Lucilia cuprina isolate Lc7/37 chromosome 5; ASM2204524v1; whole genome shotgun sequence.	24951120	24922002	10372440	10384756	393744	71024062	0.35	0.35	0.15	0.15	0.01	0.29	0.9314	0.0012	0.9988	1.8713	1458	1440	2898	12923914	12828852	5414845	5420798	143460	36731869	0.35	0.33	0.16	0.16	0.32	0.8949	0.1284	0.8851	1.8921	114009	1293	1248	2541	1346747	1141052	802820	811223	0	4101842	0.33	0.29	0.18	0.2	0.38	0.8717	0.2902	0.7666	1.918	1824	6230277	6376233	2506209	2502241	77957	17692917	0.35	0.41	0.11	0.13	0	0.24	0.8128	0.3327	0.7449	1.7479	0	89	124	213	62673	53280	24192	25362	165507	0.38	0.32	0.15	0.16	0.3	0.8438	0.3044	0.7548	1.8406	828508	849946	342618	347123	12703	2380898	0.35	0.4	0.12	0.13	0.25	0.8366	0.2443	0.8035	1.7769	37	33	70	1055	1205	1309	1739	5308	0.2	0.23	0.25	0.33	0	0.57	0.8807	0.2044	0.8239	1.9689	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	35076	29479	19978	20767	20161	16895	25381	36106	14028	20238	52178	43976	23962	11540	20648	28224	18752	19335	17299	36269	15082	22552	11007	34821	20275	17120	18125	31999	31215	14789	19009	17002	12069	33434	31828	11500	14834	13740	17705	18556	14374	8091	61945	13569	14338	25837	5237	21453	19408	24452	13080	7159	35130	16515	10322	23453	9306	6328	9885	17296	44780	19549	15836	10056
GCF_022045245.1	NC_060954	NC_060954.1	Lucilia cuprina isolate Lc7/37 chromosome 6; ASM2204524v1; whole genome shotgun sequence.	22478353	22473946	9566958	9533916	396623	64449796	0.35	0.35	0.15	0.15	0.01	0.3	0.9267	0.0018	0.9982	1.8764	1489	1466	2955	12092471	11968321	5156771	5176804	142629	34536996	0.34	0.33	0.16	0.17	0.33	0.8959	0.1238	0.8888	1.895	100160	1278	1287	2565	1379968	1187561	797133	826970	0	4191632	0.33	0.29	0.18	0.2	0.38	0.8742	0.278	0.7742	1.9193	875	6228472	6350688	2564912	2557237	85373	17786682	0.35	0.41	0.11	0.13	0	0.24	0.81	0.342	0.738	1.7479	103041	104	85	189	61993	53506	25501	25707	166707	0.37	0.32	0.15	0.16	0.31	0.8485	0.2974	0.7587	1.8436	518393	529172	209940	214578	9581	1481664	0.35	0.4	0.12	0.13	0.25	0.8337	0.2587	0.793	1.7742	74	44	118	1596	2014	2315	2753	8678	0.18	0.23	0.27	0.32	0	0.58	0.8915	0.2125	0.8132	1.9648	1	1	48	50	35	47	180	0.27	0.28	0.19	0.26	0	0.46	0.8929	0.1667	0.8523	1.9871	36275	29699	19759	20008	19720	16938	23051	38927	14174	22056	54066	45044	24063	11349	20772	27572	18444	19153	18868	39684	15545	24011	11283	36495	19792	17201	18379	33054	33162	14859	20171	18150	12379	35270	32035	11700	14902	12820	18433	17654	14335	8320	64664	14080	14974	25630	5408	22101	20518	24738	13365	7009	37042	14964	10108	22367	10295	6702	9465	17798	43912	21453	16912	10906