GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	fr_chromo_N Frequency of 'N' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_N Number of 'N' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_N Number of 'N' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	fr_tRNA_N Frequency of 'N' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_024763615.1	NC_077222	NC_077222.1	Phlebotomus papatasi isolate M1 chromosome 1; Ppap_2.1; whole genome shotgun sequence.	37183094	37179334	18916411	18889255	107000	112275094	0.33	0.33	0.17	0.17	0	0.34	0.9408	0.0008	0.9992	1.9215	2070	2211	4281	26621825	26550016	13463057	13783283	56500	80474681	0.32	0.31	0.18	0.19	0.37	0.9156	0.0899	0.9178	1.9388	323799	1905	2011	3916	2018825	1710286	1486705	1629847	6845663	0.3	0.26	0.21	0.24	0.45	0.8825	0.2642	0.7828	1.9586	30	16459742	16714227	8043665	8107440	42500	49367574	0.31	0.36	0.16	0.17	0	0.32	0.866	0.2533	0.8007	1.8722	100	95	195	85186	78913	41504	44175	249778	0.33	0.3	0.18	0.19	0	0.37	0.8755	0.246	0.7974	1.9168	228624	235577	113242	114953	500	692896	0.32	0.38	0.15	0.15	0	0.3	0.859	0.2363	0.8087	1.8467	28	61	89	1279	1567	1655	2043	6544	0.2	0.24	0.25	0.31	0	0.56	0.8946	0.2335	0.7967	1.9695	0	3	1	4	104	93	135	144	476	0.22	0.2	0.28	0.3	0	0.59	0.8855	0.0882	0.9159	1.977	56877	62807	20853	32014	38449	54445	36275	56894	35680	40373	65811	69708	47228	23120	35506	31935	36148	43874	44643	41449	44485	24571	39454	59551	50224	23948	22773	45029	29492	52718	46776	31485	28072	27934	45844	32284	30167	22573	28070	29123	28743	13991	64697	23548	30121	31307	22671	46812	29912	36590	22348	15250	20975	27497	32995	43495	10332	17999	19167	18567	55338	15839	35158	24649
GCF_024763615.1	NC_077223	NC_077223.1	Phlebotomus papatasi isolate M1 chromosome 2; Ppap_2.1; whole genome shotgun sequence.	36994732	36914361	18886015	18879985	108000	111783093	0.33	0.33	0.17	0.17	0	0.34	0.9403	0.0012	0.9988	1.9226	2226	2221	4447	27275917	27287954	13917790	14219049	66500	82767210	0.32	0.31	0.18	0.19	0.37	0.9156	0.088	0.9195	1.9397	280431	2076	2030	4106	2035884	1719655	1511127	1667300	6933966	0.29	0.25	0.21	0.24	0.45	0.8827	0.2695	0.7796	1.9582	0	16505035	16828152	8117917	8166640	34500	49652244	0.31	0.36	0.16	0.17	0	0.32	0.8669	0.2417	0.8091	1.8713	102	106	208	81156	75918	39067	42164	238305	0.33	0.3	0.17	0.19	0	0.37	0.8709	0.2491	0.7943	1.9104	321861	328472	160724	162340	500	973897	0.32	0.38	0.14	0.15	0	0.3	0.8578	0.2273	0.8159	1.842	21	43	64	875	1084	1222	1514	4695	0.19	0.23	0.26	0.32	0	0.58	0.8868	0.2404	0.792	1.963	0	0	1	1	25	24	33	37	119	0.21	0.2	0.28	0.31	0	0.59	0.8809	0.0776	0.9259	1.9759	55973	66094	21379	32147	38708	57041	37277	55821	36110	40671	63898	72292	47354	23229	36592	32786	36226	44851	45176	42276	45984	24829	40305	60897	52688	23353	22419	45564	29200	53472	46159	32901	28452	26434	45789	32937	30158	22999	28119	30314	28626	15417	65141	24525	30337	31688	22730	48808	30085	36649	22510	15427	20726	28600	35056	44787	10089	18339	19732	19292	54722	14993	34287	24844
GCF_024763615.1	NC_077224	NC_077224.1	Phlebotomus papatasi isolate M1 chromosome 3; Ppap_2.1; whole genome shotgun sequence.	29927351	29927563	15214564	15198268	92000	90359746	0.33	0.33	0.17	0.17	0	0.34	0.9404	0.0005	0.9995	1.9214	1480	1470	2950	21569854	21587832	10925578	11155244	49500	65288008	0.32	0.31	0.18	0.19	0.37	0.9158	0.0868	0.9205	1.9391	749867	1344	1338	2682	1402944	1197025	1055742	1153957	4809668	0.29	0.25	0.21	0.24	0.45	0.8823	0.2639	0.7836	1.9599	1454	12945956	13172668	6356061	6404829	32500	38912014	0.31	0.36	0.16	0.17	0	0.32	0.8703	0.2355	0.8135	1.8747	81	65	146	50697	45912	26254	28312	151175	0.33	0.29	0.18	0.2	0	0.38	0.8711	0.249	0.7946	1.9218	350337	363938	173282	180034	0	1067591	0.32	0.38	0.15	0.15	0	0.3	0.8601	0.241	0.8038	1.8472	20	24	44	674	724	835	997	3230	0.21	0.22	0.26	0.31	0	0.57	0.8881	0.2293	0.8033	1.9684	0	28	1	29	750	673	985	1043	3451	0.22	0.2	0.29	0.3	0	0.59	0.8969	0.0828	0.9211	1.9764	39478	44755	14397	22410	26900	39276	25584	38922	25821	28454	45330	49582	33188	16433	25227	22352	25352	31581	31647	28646	32090	17126	28264	42777	35101	17241	15317	31789	19986	37038	33118	22237	20891	18488	32246	23547	21359	16147	20045	21515	19792	10459	44049	16850	21842	22024	16273	31914	21406	26052	15670	10577	14087	19525	23389	30463	6756	12734	13672	13175	37718	9859	22768	17176
GCF_024763615.1	NC_077225	NC_077225.1	Phlebotomus papatasi isolate M1 chromosome 4; Ppap_2.1; whole genome shotgun sequence.	1835998	1861481	1156624	1153057	32000	6039160	0.3	0.31	0.19	0.19	0.01	0.38	0.9388	0.0084	0.9916	1.9584	93	117	210	241614	219643	162916	168371	500	793044	0.3	0.27	0.21	0.22	0.43	0.917	0.1531	0.8638	1.9733	560	81	109	190	137978	117561	104154	105175	464868	0.3	0.25	0.22	0.24	0.45	0.895	0.245	0.8	1.9624	4	90841	89508	51352	53403	500	285604	0.31	0.32	0.18	0.19	0	0.37	0.8695	0.2516	0.7957	1.9072	6	2	8	2766	2639	1292	2209	8906	0.31	0.28	0.18	0.23	0	0.41	0.8516	0.3752	0.7057	1.9317	612	641	229	433	0	1915	0.34	0.34	0.12	0.2	0	0.32	0.8302	0.4193	0.6874	1.8468	1	0	1	13	16	20	24	73	0.18	0.22	0.27	0.33	0	0.6	0.887	0.1944	0.8229	1.9627	0	5	6	11	4890	4882	3317	4310	17399	0.28	0.28	0.19	0.25	0	0.44	0.916	0.1535	0.8649	1.9825	3440	4335	1673	2577	2969	3708	2464	4020	2186	2643	4002	4584	3627	1362	2069	2625	2558	2769	3120	3048	2559	1514	2794	4038	3237	2051	1586	3602	2002	2912	3119	2649	2153	1828	3372	2580	2168	1459	1731	1929	1681	1146	4982	1344	1794	2398	1439	3160	1780	2602	1468	1091	1746	1977	2071	3183	585	1006	1233	1482	4066	648	1310	1597
GCF_024763615.1	NC_077226	NC_077226.1	Phlebotomus papatasi isolate M1 chromosome 5; Ppap_2.1; whole genome shotgun sequence.	1499132	1488696	786881	781875	11000	4567584	0.33	0.33	0.17	0.17	0	0.34	0.9309	0.0067	0.9933	1.9277	78	74	152	1052731	1036276	559549	555951	3500	3208007	0.32	0.31	0.18	0.19	0.37	0.9136	0.0771	0.9285	1.9412	1157	73	66	139	86484	71279	63829	69552	291144	0.3	0.24	0.22	0.24	0.46	0.8839	0.2728	0.776	1.9625	0	711244	723370	372322	362969	3000	2172905	0.31	0.37	0.16	0.16	0	0.32	0.8636	0.2929	0.7769	1.8564	4	8	12	6775	6164	3016	3071	19026	0.33	0.3	0.18	0.2	0	0.37	0.8792	0.2342	0.8062	1.9188	5106	5718	2439	2444	0	15707	0.32	0.37	0.15	0.16	0	0.31	0.8715	0.2392	0.8042	1.8645	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2634	2319	1166	1103	1891	1638	1495	2286	1066	1817	2733	2691	2222	1027	1626	1337	1053	1943	1406	1566	1638	1941	1220	2738	2186	1249	1152	2123	1259	1841	1852	1037	1276	1332	2374	1284	1431	981	1185	1462	1121	604	2652	1063	1180	1537	786	1660	1374	1740	879	653	933	937	1347	2668	456	779	876	1072	2770	641	1480	1063
NA	NC_028042	NC_028042.1	Phlebotomus papatasi mitochondrion; complete genome.	5957	6106	2164	1330	0	15557	0.38	0.39	0.14	0.09	0	0.22	0.8858	0.251	0.7951	1.7591	23	14	37	5039	6272	1660	1772	0	14743	0.38	0.4	0.1	0.11	0.21	0.8282	0.3342	0.7339	1.7177	12	4	1	5	1130	1451	584	414	3579	0.32	0.42	0.15	0.12	0.26	0.8619	0.3872	0.6866	1.8021	1	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	14	8	22	604	554	130	164	1452	0.42	0.38	0.09	0.11	0	0.2	0.8128	0.2852	0.7727	1.7012	1	0	2	2	865	884	112	235	2096	0.41	0.42	0.05	0.11	0	0.17	0.7998	0.3647	0.7272	1.6381	6	2	15	28	18	3	25	104	8	1	56	24	33	2	8	13	28	1	23	76	1	9	6	24	0	5	21	2	44	47	21	24	4	52	38	1	9	5	11	11	3	2	13	4	0	38	5	12	9	34	1	1	117	32	0	17	1	0	1	6	33	4	37	14