Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of āGā + āCā nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GCF_013339695.2 | NC_051176 | NC_051176.1 | Rhipicephalus sanguineus isolate Rsan-2018 chromosome 1; BIME_Rsan_1.4; whole genome shotgun sequence. | 91270476 | 91106252 | 79092951 | 79134870 | 101600 | 340706149 | 0.27 | 0.27 | 0.23 | 0.23 | 0 | 0.46 | 0.9562 | 0.0012 | 0.9988 | 1.9962 | 2537 | 2324 | 4861 | 43712806 | 45343420 | 37864665 | 38428008 | 27600 | 165376499 | 0.24 | 0.26 | 0.24 | 0.26 | 0 | 0.5 | 0.923 | 0.1151 | 0.8973 | 1.9798 | 382935 | 1509 | 1475 | 2984 | 1079050 | 933581 | 1162460 | 1174084 | 0 | 4349175 | 0.26 | 0.22 | 0.25 | 0.27 | 0 | 0.52 | 0.8739 | 0.263 | 0.7844 | 1.9595 | 4 | 31738351 | 33091027 | 27198643 | 27630643 | 18800 | 119677464 | 0.27 | 0.3 | 0.21 | 0.22 | 0 | 0.43 | 0.9127 | 0.1365 | 0.8817 | 1.9706 | 0 | 249 | 229 | 478 | 130510 | 134871 | 110418 | 117119 | 0 | 492918 | 0.26 | 0.24 | 0.24 | 0.26 | 0 | 0.5 | 0.8764 | 0.2597 | 0.7867 | 1.9616 | 0 | 1896364 | 1946575 | 1622502 | 1639284 | 2900 | 7107625 | 0.26 | 0.3 | 0.21 | 0.22 | 0 | 0.43 | 0.9053 | 0.1778 | 0.8513 | 1.9644 | 0 | 720 | 556 | 1276 | 16766 | 20773 | 25521 | 31270 | 0 | 94330 | 0.18 | 0.22 | 0.27 | 0.33 | 0 | 0.6 | 0.8906 | 0.2355 | 0.7974 | 1.9522 | 0 | 0 | 7 | 7 | 182 | 154 | 238 | 259 | 0 | 833 | 0.22 | 0.18 | 0.29 | 0.31 | 0 | 0.6 | 0.8987 | 0.1256 | 0.8825 | 1.9701 | 0 | 30292 | 40184 | 11699 | 19915 | 33360 | 35349 | 29442 | 16601 | 18881 | 25496 | 15365 | 34283 | 23312 | 21165 | 17774 | 25138 | 18781 | 34963 | 26566 | 18686 | 40555 | 17853 | 25372 | 21124 | 37258 | 22843 | 13158 | 23699 | 10627 | 24444 | 21168 | 23200 | 22368 | 10433 | 26685 | 34096 | 26395 | 17897 | 20473 | 33381 | 30778 | 22557 | 25788 | 31515 | 27953 | 18344 | 14041 | 20589 | 17192 | 20082 | 19510 | 23430 | 8197 | 22085 | 20042 | 27986 | 4728 | 17857 | 20036 | 15254 | 27566 | 4586 | 15557 | 17745 |
GCF_013339695.2 | NC_051177 | NC_051177.1 | Rhipicephalus sanguineus isolate Rsan-2018 chromosome 2; BIME_Rsan_1.4; whole genome shotgun sequence. | 63399443 | 63444013 | 55982554 | 55971766 | 98200 | 238895976 | 0.27 | 0.27 | 0.23 | 0.23 | 0 | 0.47 | 0.9574 | 0.0004 | 0.9996 | 1.997 | 1491 | 1536 | 3027 | 25697076 | 26390608 | 22908076 | 23081201 | 25900 | 98102861 | 0.25 | 0.26 | 0.24 | 0.25 | 0 | 0.5 | 0.9262 | 0.0943 | 0.9144 | 1.9825 | 85931 | 988 | 1020 | 2008 | 673742 | 580902 | 803690 | 789655 | 0 | 2847989 | 0.24 | 0.21 | 0.27 | 0.27 | 0 | 0.55 | 0.8743 | 0.2619 | 0.7852 | 1.9566 | 1 | 17038611 | 17568031 | 15017362 | 15136317 | 16400 | 64776721 | 0.26 | 0.29 | 0.22 | 0.22 | 0 | 0.44 | 0.9142 | 0.1275 | 0.8879 | 1.9773 | 146956 | 170 | 187 | 357 | 80509 | 82393 | 69031 | 71721 | 0 | 303654 | 0.26 | 0.24 | 0.24 | 0.25 | 0 | 0.49 | 0.8766 | 0.2506 | 0.7927 | 1.9625 | 99 | 1088136 | 1112772 | 919218 | 925851 | 800 | 4046777 | 0.27 | 0.31 | 0.21 | 0.22 | 0 | 0.43 | 0.908 | 0.1575 | 0.8652 | 1.9664 | 0 | 280 | 266 | 546 | 7002 | 8685 | 11590 | 13592 | 0 | 40869 | 0.18 | 0.21 | 0.28 | 0.33 | 0 | 0.61 | 0.882 | 0.2561 | 0.7844 | 1.9419 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 18487 | 25161 | 6999 | 12055 | 20919 | 24191 | 18677 | 8958 | 13492 | 16699 | 7981 | 20409 | 14090 | 17299 | 10142 | 16981 | 11491 | 23466 | 19254 | 10201 | 27320 | 11237 | 18808 | 12084 | 24131 | 16149 | 7881 | 13048 | 5199 | 16085 | 14534 | 13383 | 16777 | 6179 | 16008 | 24623 | 18175 | 13223 | 14668 | 24256 | 19842 | 17341 | 14122 | 21320 | 18755 | 10832 | 9791 | 12570 | 10163 | 11372 | 15257 | 17936 | 4188 | 14187 | 13377 | 17551 | 2557 | 13953 | 16348 | 11115 | 16896 | 2525 | 8910 | 13867 |
GCF_013339695.2 | NC_051178 | NC_051178.1 | Rhipicephalus sanguineus isolate Rsan-2018 chromosome 3; BIME_Rsan_1.4; whole genome shotgun sequence. | 62117741 | 62113734 | 54840524 | 54870014 | 165702 | 234107715 | 0.27 | 0.27 | 0.23 | 0.23 | 0 | 0.47 | 0.9543 | 0.0003 | 0.9997 | 1.9968 | 1491 | 1497 | 2988 | 25550155 | 26459617 | 22645054 | 22902019 | 45300 | 97602145 | 0.26 | 0.26 | 0.24 | 0.24 | 0 | 0.48 | 0.9312 | 0.0834 | 0.9238 | 1.987 | 1443662 | 1143 | 1138 | 2281 | 743573 | 639675 | 889489 | 877122 | 0 | 3149859 | 0.25 | 0.21 | 0.27 | 0.27 | 0 | 0.54 | 0.8736 | 0.2596 | 0.7869 | 1.9577 | 0 | 17271797 | 17982726 | 15098082 | 15288666 | 25800 | 65667071 | 0.27 | 0.3 | 0.22 | 0.22 | 0 | 0.44 | 0.9132 | 0.1292 | 0.8859 | 1.9756 | 88093 | 169 | 153 | 322 | 64959 | 66442 | 58009 | 60602 | 0 | 250012 | 0.26 | 0.24 | 0.24 | 0.26 | 0 | 0.5 | 0.8754 | 0.2678 | 0.7811 | 1.9614 | 0 | 715184 | 741713 | 596660 | 601626 | 1500 | 2656683 | 0.27 | 0.31 | 0.21 | 0.22 | 0 | 0.42 | 0.9064 | 0.1646 | 0.8596 | 1.963 | 0 | 77 | 91 | 168 | 2034 | 2634 | 3485 | 4275 | 0 | 12428 | 0.16 | 0.21 | 0.28 | 0.34 | 0 | 0.62 | 0.889 | 0.2426 | 0.7926 | 1.938 | 0 | 13 | 8 | 21 | 7428 | 7118 | 7726 | 9465 | 0 | 31737 | 0.22 | 0.25 | 0.24 | 0.3 | 0 | 0.54 | 0.912 | 0.1918 | 0.8297 | 1.9836 | 0 | 20566 | 27839 | 7419 | 13413 | 22996 | 27554 | 20994 | 9711 | 14888 | 18749 | 8934 | 22402 | 15527 | 19376 | 11491 | 19110 | 12560 | 25955 | 20747 | 10970 | 30689 | 12303 | 20649 | 13041 | 26667 | 17670 | 8587 | 14255 | 5862 | 17512 | 16094 | 14911 | 18355 | 6621 | 17942 | 27168 | 19882 | 14481 | 16110 | 27051 | 22414 | 19398 | 15140 | 24031 | 20557 | 11935 | 10464 | 13970 | 11014 | 12676 | 17423 | 20315 | 4494 | 15735 | 14886 | 19505 | 2908 | 15556 | 17781 | 12425 | 18184 | 2622 | 9950 | 15030 |
GCF_013339695.2 | NC_051179 | NC_051179.1 | Rhipicephalus sanguineus isolate Rsan-2018 chromosome 4; BIME_Rsan_1.4; whole genome shotgun sequence. | 56084761 | 56033569 | 49807106 | 49828337 | 95700 | 211849473 | 0.26 | 0.26 | 0.24 | 0.24 | 0 | 0.47 | 0.9586 | 0.0007 | 0.9993 | 1.9972 | 1532 | 1690 | 3222 | 24953967 | 25693023 | 22353753 | 22503774 | 29900 | 95534417 | 0.24 | 0.26 | 0.24 | 0.26 | 0 | 0.5 | 0.9243 | 0.1048 | 0.9059 | 1.9821 | 1703882 | 1062 | 1047 | 2109 | 684256 | 585108 | 830021 | 813499 | 0 | 2912884 | 0.24 | 0.21 | 0.27 | 0.28 | 0 | 0.55 | 0.8729 | 0.2704 | 0.78 | 1.9532 | 0 | 16341067 | 16917199 | 14439470 | 14561652 | 15900 | 62275288 | 0.27 | 0.29 | 0.22 | 0.22 | 0 | 0.44 | 0.9148 | 0.1246 | 0.8899 | 1.9778 | 23700 | 185 | 200 | 385 | 63603 | 63399 | 57143 | 59832 | 0 | 243977 | 0.26 | 0.24 | 0.24 | 0.26 | 0 | 0.5 | 0.8729 | 0.2777 | 0.7754 | 1.9586 | 0 | 1337776 | 1351790 | 1158642 | 1162911 | 1700 | 5012819 | 0.26 | 0.3 | 0.21 | 0.22 | 0 | 0.44 | 0.9098 | 0.15 | 0.8736 | 1.9682 | 0 | 244 | 377 | 621 | 7682 | 10099 | 12619 | 15085 | 0 | 45485 | 0.17 | 0.22 | 0.28 | 0.33 | 0 | 0.61 | 0.8874 | 0.2294 | 0.7996 | 1.9501 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 18834 | 26186 | 7247 | 11864 | 21603 | 25490 | 19009 | 8765 | 14331 | 16664 | 7990 | 21083 | 13764 | 18445 | 10213 | 17441 | 11508 | 24203 | 19077 | 9826 | 28080 | 11408 | 19266 | 11860 | 24425 | 16877 | 8054 | 12877 | 5209 | 15995 | 14793 | 12966 | 17563 | 6105 | 16227 | 25519 | 18504 | 14052 | 14871 | 26271 | 20393 | 17829 | 14025 | 21929 | 18943 | 11066 | 9723 | 12505 | 9871 | 11631 | 16558 | 19858 | 4216 | 14790 | 13692 | 17433 | 2694 | 14568 | 17401 | 11566 | 16666 | 2420 | 8829 | 14112 |
GCF_013339695.2 | NC_051180 | NC_051180.1 | Rhipicephalus sanguineus isolate Rsan-2018 chromosome 5; BIME_Rsan_1.4; whole genome shotgun sequence. | 55667998 | 55621860 | 48622377 | 48702852 | 81100 | 208696187 | 0.27 | 0.27 | 0.23 | 0.23 | 0 | 0.47 | 0.9583 | 0.0012 | 0.9988 | 1.9965 | 1168 | 1072 | 2240 | 20799558 | 21400880 | 18444972 | 18589714 | 18900 | 79254024 | 0.26 | 0.26 | 0.24 | 0.24 | 0 | 0.48 | 0.9311 | 0.0798 | 0.9273 | 1.9871 | 763787 | 841 | 806 | 1647 | 550101 | 471000 | 657136 | 641831 | 0 | 2320068 | 0.25 | 0.21 | 0.27 | 0.27 | 0 | 0.54 | 0.8737 | 0.2643 | 0.784 | 1.9555 | 0 | 14505633 | 14996540 | 12740250 | 12864760 | 10900 | 55118083 | 0.27 | 0.29 | 0.22 | 0.22 | 0 | 0.44 | 0.9151 | 0.123 | 0.8913 | 1.9777 | 0 | 122 | 125 | 247 | 52214 | 52093 | 45678 | 48920 | 0 | 198905 | 0.26 | 0.24 | 0.24 | 0.26 | 0 | 0.5 | 0.868 | 0.2907 | 0.7685 | 1.9515 | 1 | 940781 | 965796 | 803099 | 804799 | 1900 | 3516375 | 0.26 | 0.31 | 0.2 | 0.22 | 0 | 0.43 | 0.9002 | 0.1943 | 0.8427 | 1.951 | 0 | 177 | 107 | 284 | 3909 | 4376 | 5630 | 6718 | 0 | 20633 | 0.19 | 0.21 | 0.27 | 0.33 | 0 | 0.6 | 0.8846 | 0.1752 | 0.8445 | 1.9594 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 14941 | 20138 | 5513 | 10015 | 17015 | 19010 | 14699 | 7047 | 11336 | 13455 | 6328 | 16757 | 11970 | 15237 | 8634 | 14107 | 9647 | 18286 | 15332 | 8044 | 21557 | 8869 | 15079 | 9397 | 18762 | 13227 | 6404 | 10590 | 4355 | 12998 | 11478 | 11019 | 13222 | 5091 | 13438 | 19242 | 14602 | 10644 | 11805 | 19534 | 17144 | 14644 | 11185 | 17227 | 15278 | 8759 | 7539 | 10766 | 8192 | 9107 | 13452 | 15733 | 3627 | 11376 | 11217 | 14456 | 2263 | 11587 | 13390 | 9450 | 13695 | 2218 | 7610 | 11472 |
GCF_013339695.2 | NC_051181 | NC_051181.1 | Rhipicephalus sanguineus isolate Rsan-2018 chromosome 6; BIME_Rsan_1.4; whole genome shotgun sequence. | 47200185 | 47179465 | 41798457 | 41820431 | 79800 | 178078338 | 0.27 | 0.26 | 0.23 | 0.23 | 0 | 0.47 | 0.9518 | 0.0005 | 0.9995 | 1.9971 | 1283 | 1146 | 2429 | 19629893 | 20125987 | 17429148 | 17590654 | 24000 | 74799682 | 0.25 | 0.26 | 0.24 | 0.25 | 0 | 0.49 | 0.9273 | 0.102 | 0.908 | 1.9837 | 268012 | 824 | 836 | 1660 | 552275 | 468197 | 659718 | 653972 | 0 | 2334162 | 0.25 | 0.21 | 0.27 | 0.28 | 0 | 0.55 | 0.8736 | 0.2685 | 0.7813 | 1.9547 | 0 | 13077703 | 13511758 | 11461087 | 11579252 | 12600 | 49642400 | 0.27 | 0.3 | 0.22 | 0.22 | 0 | 0.44 | 0.9128 | 0.1322 | 0.8838 | 1.9758 | 0 | 127 | 139 | 266 | 45599 | 46631 | 41129 | 43941 | 0 | 177300 | 0.26 | 0.24 | 0.24 | 0.26 | 0 | 0.5 | 0.8753 | 0.2753 | 0.776 | 1.9583 | 0 | 701877 | 728152 | 600516 | 611266 | 900 | 2642711 | 0.26 | 0.31 | 0.21 | 0.22 | 0 | 0.43 | 0.9061 | 0.1716 | 0.8565 | 1.9626 | 0 | 276 | 122 | 398 | 5484 | 6062 | 7744 | 9719 | 0 | 29009 | 0.19 | 0.21 | 0.27 | 0.34 | 0 | 0.6 | 0.8961 | 0.2454 | 0.7876 | 1.9519 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 15144 | 21633 | 5562 | 9637 | 17085 | 20730 | 14917 | 7145 | 11141 | 13473 | 6328 | 17049 | 10891 | 14707 | 8367 | 14210 | 9066 | 19381 | 15459 | 8044 | 22900 | 9378 | 15567 | 9910 | 20003 | 13132 | 6300 | 10548 | 4224 | 13430 | 11844 | 10858 | 13731 | 4870 | 12912 | 21122 | 15042 | 10978 | 12117 | 20208 | 16388 | 14092 | 11314 | 18342 | 14741 | 8901 | 7836 | 10243 | 7642 | 9048 | 12679 | 15348 | 3333 | 11366 | 11247 | 14122 | 1948 | 11497 | 13646 | 9111 | 13401 | 1885 | 6711 | 11078 |
GCF_013339695.2 | NC_051182 | NC_051182.1 | Rhipicephalus sanguineus isolate Rsan-2018 chromosome 7; BIME_Rsan_1.4; whole genome shotgun sequence. | 45830799 | 45815049 | 40605982 | 40559459 | 102500 | 172913789 | 0.27 | 0.26 | 0.23 | 0.23 | 0 | 0.47 | 0.9526 | 0.0007 | 0.9993 | 1.997 | 1074 | 1047 | 2121 | 14220221 | 14561831 | 12615445 | 12716034 | 21100 | 54134631 | 0.25 | 0.26 | 0.24 | 0.25 | 0 | 0.48 | 0.9302 | 0.0829 | 0.9243 | 1.9873 | 348091 | 777 | 754 | 1531 | 430681 | 369878 | 546029 | 531647 | 0 | 1878235 | 0.24 | 0.2 | 0.28 | 0.28 | 0 | 0.56 | 0.872 | 0.2675 | 0.7827 | 1.9492 | 1 | 8634192 | 8895072 | 7543906 | 7627605 | 11900 | 32712675 | 0.27 | 0.29 | 0.22 | 0.23 | 0 | 0.45 | 0.9164 | 0.1164 | 0.8958 | 1.9808 | 188747 | 171 | 181 | 352 | 63157 | 62516 | 56759 | 58252 | 0 | 240684 | 0.26 | 0.24 | 0.24 | 0.25 | 0 | 0.49 | 0.8731 | 0.2759 | 0.7779 | 1.9565 | 0 | 889066 | 902524 | 747240 | 752816 | 800 | 3292446 | 0.27 | 0.3 | 0.21 | 0.22 | 0 | 0.43 | 0.9083 | 0.1561 | 0.872 | 1.9633 | 0 | 79 | 69 | 148 | 1891 | 2349 | 3050 | 3643 | 0 | 10933 | 0.17 | 0.21 | 0.28 | 0.33 | 0 | 0.61 | 0.8879 | 0.2096 | 0.8163 | 1.9466 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 11066 | 16282 | 4606 | 7302 | 13187 | 16733 | 11877 | 5186 | 9468 | 10275 | 4591 | 13165 | 8452 | 12320 | 6213 | 11678 | 7068 | 15146 | 12594 | 5796 | 18241 | 7556 | 13138 | 7191 | 15495 | 11202 | 5381 | 7918 | 3050 | 10945 | 9590 | 8559 | 12538 | 3718 | 9358 | 17790 | 12102 | 9244 | 10131 | 17324 | 12501 | 12379 | 7967 | 15101 | 11969 | 7058 | 6441 | 7885 | 5905 | 7035 | 11258 | 13537 | 2560 | 9084 | 8817 | 11028 | 1582 | 10624 | 11889 | 8042 | 10660 | 1478 | 5194 | 10118 |
GCF_013339695.2 | NC_051183 | NC_051183.1 | Rhipicephalus sanguineus isolate Rsan-2018 chromosome 8; BIME_Rsan_1.4; whole genome shotgun sequence. | 45664461 | 45743865 | 40142835 | 40146697 | 94200 | 171792058 | 0.27 | 0.27 | 0.23 | 0.23 | 0 | 0.47 | 0.9586 | 0.0009 | 0.9991 | 1.9967 | 1093 | 1053 | 2146 | 15017282 | 15332630 | 13087678 | 13229209 | 16200 | 56682999 | 0.25 | 0.26 | 0.24 | 0.25 | 0 | 0.49 | 0.9291 | 0.0874 | 0.9205 | 1.9858 | 373843 | 768 | 695 | 1463 | 438561 | 370210 | 509405 | 507892 | 0 | 1826068 | 0.25 | 0.21 | 0.27 | 0.27 | 0 | 0.54 | 0.8747 | 0.2669 | 0.7825 | 1.9553 | 0 | 9091489 | 9342784 | 7826940 | 7920539 | 8700 | 34190452 | 0.27 | 0.29 | 0.22 | 0.22 | 0 | 0.44 | 0.9163 | 0.1149 | 0.8976 | 1.9786 | 111295 | 167 | 173 | 340 | 66386 | 64716 | 56822 | 58892 | 0 | 246816 | 0.27 | 0.24 | 0.24 | 0.25 | 0 | 0.49 | 0.876 | 0.2528 | 0.79 | 1.9639 | 1 | 1267031 | 1291554 | 1077483 | 1078483 | 1800 | 4716351 | 0.27 | 0.3 | 0.21 | 0.22 | 0 | 0.43 | 0.9134 | 0.1303 | 0.8856 | 1.9722 | 0 | 123 | 143 | 266 | 3348 | 4382 | 5464 | 6639 | 0 | 19833 | 0.17 | 0.22 | 0.27 | 0.33 | 0 | 0.61 | 0.8778 | 0.2398 | 0.7931 | 1.9494 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 11843 | 16144 | 4635 | 7314 | 12722 | 15779 | 10857 | 5707 | 8674 | 10364 | 5430 | 14115 | 8435 | 11692 | 6331 | 11330 | 6935 | 14407 | 12088 | 6442 | 16850 | 7141 | 12060 | 7647 | 14285 | 10061 | 5193 | 8140 | 3811 | 10668 | 9406 | 8479 | 11279 | 4325 | 10119 | 16506 | 11613 | 8101 | 9727 | 15259 | 12294 | 10865 | 9404 | 13336 | 11898 | 7307 | 6085 | 8420 | 6353 | 7358 | 10220 | 12432 | 2970 | 8343 | 8901 | 10544 | 1974 | 9618 | 10618 | 7418 | 10903 | 1985 | 5544 | 9627 |
GCF_013339695.2 | NC_051184 | NC_051184.2 | Rhipicephalus sanguineus isolate Rsan-2018 chromosome 9; BIME_Rsan_1.4; whole genome shotgun sequence. | 40458695 | 40366488 | 36093246 | 36127216 | 1731274 | 154776919 | 0.26 | 0.26 | 0.23 | 0.23 | 0.01 | 0.47 | 0.9586 | 0.0016 | 0.9984 | 1.9914 | 815 | 860 | 1675 | 12597959 | 13000102 | 11243141 | 11339437 | 11100 | 48191739 | 0.25 | 0.26 | 0.24 | 0.25 | 0 | 0.49 | 0.9303 | 0.0847 | 0.9231 | 1.9874 | 179654 | 658 | 675 | 1333 | 433212 | 366269 | 549124 | 533686 | 0 | 1882291 | 0.24 | 0.2 | 0.28 | 0.28 | 0 | 0.56 | 0.8728 | 0.2585 | 0.7878 | 1.9527 | 1 | 8261386 | 8587973 | 7237531 | 7318035 | 6200 | 31411125 | 0.27 | 0.29 | 0.22 | 0.22 | 0 | 0.44 | 0.9143 | 0.123 | 0.8909 | 1.9791 | 0 | 95 | 118 | 213 | 40111 | 40675 | 35008 | 36986 | 0 | 152780 | 0.26 | 0.24 | 0.24 | 0.26 | 0 | 0.49 | 0.8652 | 0.3083 | 0.7593 | 1.944 | 0 | 632213 | 648899 | 543499 | 549473 | 700 | 2374784 | 0.26 | 0.3 | 0.21 | 0.22 | 0 | 0.43 | 0.903 | 0.1813 | 0.8558 | 1.9556 | 0 | 37 | 35 | 72 | 900 | 1048 | 1490 | 1820 | 0 | 5258 | 0.17 | 0.2 | 0.28 | 0.35 | 0 | 0.63 | 0.8891 | 0.2227 | 0.8064 | 1.9349 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 11793 | 17175 | 4167 | 7386 | 13171 | 17376 | 11438 | 5378 | 9017 | 10597 | 4434 | 13478 | 8348 | 12415 | 6368 | 11743 | 6980 | 15715 | 12647 | 5666 | 18332 | 7270 | 13086 | 7420 | 15641 | 11061 | 4814 | 7608 | 2900 | 10582 | 10115 | 8351 | 12133 | 3554 | 9466 | 18740 | 12576 | 9621 | 10008 | 17464 | 13448 | 12642 | 7924 | 14935 | 11976 | 6882 | 6520 | 7474 | 5875 | 6781 | 11170 | 13043 | 2199 | 9442 | 8844 | 11402 | 1306 | 10178 | 12349 | 7958 | 10404 | 1318 | 5036 | 9865 |
GCF_013339695.2 | NC_051185 | NC_051185.1 | Rhipicephalus sanguineus isolate Rsan-2018 chromosome 10; BIME_Rsan_1.4; whole genome shotgun sequence. | 40542276 | 40587304 | 35912732 | 35866312 | 81200 | 152989824 | 0.26 | 0.27 | 0.23 | 0.23 | 0 | 0.47 | 0.9576 | 0.0012 | 0.9988 | 1.997 | 1173 | 1008 | 2181 | 14568433 | 14981104 | 12944959 | 13031860 | 17600 | 55543956 | 0.25 | 0.25 | 0.24 | 0.25 | 0 | 0.5 | 0.9235 | 0.0953 | 0.9135 | 1.9833 | 400277 | 717 | 733 | 1450 | 470128 | 399249 | 583846 | 569480 | 0 | 2022703 | 0.24 | 0.2 | 0.28 | 0.28 | 0 | 0.56 | 0.8743 | 0.2528 | 0.7921 | 1.9552 | 4 | 9811472 | 10134122 | 8629317 | 8687640 | 10500 | 37273051 | 0.27 | 0.29 | 0.22 | 0.23 | 0 | 0.45 | 0.9159 | 0.1191 | 0.8941 | 1.9806 | 0 | 140 | 125 | 265 | 56284 | 56341 | 48558 | 50026 | 0 | 211209 | 0.26 | 0.24 | 0.24 | 0.25 | 0 | 0.49 | 0.8751 | 0.2569 | 0.7885 | 1.9634 | 0 | 805679 | 828217 | 683297 | 687952 | 1200 | 3006345 | 0.26 | 0.31 | 0.21 | 0.22 | 0 | 0.43 | 0.9078 | 0.167 | 0.8588 | 1.9663 | 0 | 172 | 119 | 291 | 3875 | 4378 | 5792 | 7288 | 0 | 21333 | 0.18 | 0.21 | 0.27 | 0.34 | 0 | 0.61 | 0.8788 | 0.2262 | 0.8025 | 1.9465 | 0 | 106 | 0 | 106 | 2650 | 2334 | 3708 | 3920 | 0 | 12612 | 0.21 | 0.19 | 0.29 | 0.31 | 0 | 0.6 | 0.8929 | 0.0912 | 0.9133 | 1.9666 | 0 | 12161 | 17654 | 4564 | 8392 | 14161 | 18049 | 12489 | 5770 | 10450 | 10859 | 5243 | 15010 | 9352 | 13948 | 7238 | 12714 | 7999 | 16292 | 13295 | 6326 | 19066 | 8027 | 13604 | 8100 | 16376 | 11859 | 5314 | 8486 | 3266 | 11483 | 10477 | 9025 | 13085 | 3970 | 11048 | 18978 | 12960 | 9760 | 9779 | 17948 | 14056 | 13378 | 9111 | 15077 | 13659 | 7593 | 6914 | 8860 | 6902 | 7666 | 12449 | 14272 | 2537 | 9975 | 9706 | 11901 | 1618 | 10754 | 12957 | 8735 | 11147 | 1459 | 5876 | 10550 |
GCF_013339695.2 | NC_051186 | NC_051186.1 | Rhipicephalus sanguineus isolate Rsan-2018 chromosome 11; BIME_Rsan_1.4; whole genome shotgun sequence. | 38485276 | 38589419 | 34110919 | 34128850 | 75900 | 145390364 | 0.26 | 0.27 | 0.23 | 0.23 | 0 | 0.47 | 0.9582 | 0.0016 | 0.9984 | 1.997 | 1035 | 1024 | 2059 | 15352821 | 15791109 | 13656308 | 13786533 | 20800 | 58607571 | 0.26 | 0.26 | 0.24 | 0.24 | 0 | 0.48 | 0.9306 | 0.0815 | 0.9259 | 1.9879 | 332597 | 727 | 762 | 1489 | 427418 | 357036 | 522743 | 515359 | 0 | 1822556 | 0.24 | 0.2 | 0.27 | 0.28 | 0 | 0.55 | 0.8716 | 0.2754 | 0.7771 | 1.9503 | 1 | 9773313 | 10141987 | 8565840 | 8675087 | 9700 | 37165927 | 0.27 | 0.29 | 0.22 | 0.22 | 0 | 0.44 | 0.9151 | 0.1204 | 0.893 | 1.979 | 0 | 188 | 151 | 339 | 81748 | 81672 | 67246 | 70940 | 0 | 301606 | 0.27 | 0.25 | 0.24 | 0.25 | 0 | 0.49 | 0.8762 | 0.2634 | 0.7852 | 1.9598 | 0 | 831218 | 850235 | 710723 | 715785 | 500 | 3108461 | 0.27 | 0.3 | 0.21 | 0.22 | 0 | 0.43 | 0.9119 | 0.1473 | 0.8747 | 1.9684 | 0 | 78 | 67 | 145 | 1976 | 2294 | 2823 | 3502 | 0 | 10595 | 0.19 | 0.22 | 0.27 | 0.33 | 0 | 0.6 | 0.8904 | 0.2252 | 0.803 | 1.9551 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 11835 | 16975 | 4474 | 7276 | 13038 | 16584 | 11214 | 5203 | 8971 | 10486 | 4762 | 13373 | 7977 | 12288 | 6269 | 11065 | 6636 | 14959 | 11920 | 5895 | 18131 | 6974 | 12475 | 7246 | 15098 | 10767 | 4825 | 7641 | 2933 | 10037 | 9402 | 7928 | 11580 | 3817 | 9902 | 17166 | 11862 | 8850 | 9323 | 16462 | 12736 | 11541 | 8404 | 13858 | 11470 | 6654 | 6247 | 7788 | 5730 | 6830 | 10454 | 13053 | 2408 | 8750 | 8888 | 10848 | 1484 | 9668 | 11405 | 7149 | 10042 | 1401 | 5118 | 9424 |