GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_N Number of 'N' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	fr_tRNA_N Frequency of 'N' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_000699445.3	NC_067195	NC_067195.1	Schistosoma haematobium chromosome ZW; whole genome shotgun sequence.	28914338	28919478	15639544	15690132	5000	89168492	0.32	0.32	0.18	0.18	0.35	0.9429	0.0017	0.9983	1.9353	1059	1078	2137	16272274	17363834	8887940	8857761	0	51381809	0.31	0.33	0.18	0.18	0.35	0.9246	0.0771	0.9286	1.9316	30826	1046	1059	2105	1330552	1221078	717568	719917	3989115	0.33	0.31	0.18	0.19	0.36	0.8707	0.2569	0.7879	1.9128	0	11233023	12167363	6084611	6067468	0	35552465	0.31	0.36	0.16	0.16	0.33	0.8865	0.165	0.8606	1.8913	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	31709	22706	19706	25280	17318	13331	19014	44236	12353	17669	58761	43627	37287	9617	23629	24558	25607	15430	22839	35977	15829	18798	10644	38008	17953	10811	18752	25928	33673	16597	24149	21768	13635	33071	31936	13017	12622	4942	17096	6399	10102	4894	54512	6171	10409	28113	5690	20889	22143	28284	11510	5213	43057	14841	7337	21410	8802	4815	6375	16541	39824	18759	16720	12591
GCF_000699445.3	NC_067196	NC_067196.1	Schistosoma haematobium chromosome 1; whole genome shotgun sequence.	30394483	30487374	16210268	16212425	2000	93306550	0.33	0.33	0.17	0.17	0.35	0.9415	0.0016	0.9984	1.9318	1129	1064	2193	16279183	17379067	8750489	8689530	0	51098269	0.32	0.33	0.18	0.18	0.35	0.924	0.0766	0.9291	1.9279	35208	1108	1050	2158	1360254	1234561	725749	720370	4040934	0.33	0.3	0.17	0.19	0.36	0.8696	0.2643	0.7829	1.9105	0	11504448	12469755	6130614	6081384	0	36186201	0.31	0.36	0.16	0.16	0.32	0.8852	0.169	0.8575	1.8881	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	32098	23932	19486	24949	16645	13275	19907	45326	12399	17144	59197	43408	38047	9381	23542	25286	25369	14842	23789	36203	16146	18177	10901	37415	19564	11080	18969	25946	33950	16869	25527	21935	13398	35451	31804	13144	12856	5057	17995	6316	11026	4488	56857	6059	10552	27618	5502	21186	22876	29009	11397	5024	42326	15153	7313	21296	9663	4694	6132	15814	40374	20496	18236	12499
GCF_000699445.3	NC_067197	NC_067197.1	Schistosoma haematobium chromosome 2; whole genome shotgun sequence.	15375661	15406085	8299500	8284117	2500	47367863	0.32	0.33	0.18	0.17	0.35	0.9399	0.0019	0.9981	1.9341	533	568	1101	8162908	8715280	4450267	4414043	500	25742998	0.32	0.33	0.18	0.18	0.35	0.9241	0.0754	0.9296	1.9307	3321	527	557	1084	715882	646373	373886	369081	2105222	0.34	0.31	0.17	0.18	0.36	0.8683	0.2612	0.785	1.9063	62	5856120	6344946	3175250	3147346	500	18524162	0.31	0.36	0.16	0.17	0.33	0.8831	0.1786	0.8512	1.8892	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	16568	11520	10338	13573	8664	6751	9753	24342	6401	8473	32959	23940	20246	4822	12752	12491	13205	7391	11910	18377	7742	9481	5258	21069	9917	6123	9774	13288	18377	8556	13138	11155	6859	18456	17300	6925	6848	2290	9133	3317	4983	2254	29303	3149	5429	14332	2619	10764	12093	15649	5714	2340	23596	7411	3404	11042	4596	2323	2908	8757	21819	9901	8911	6638
GCF_000699445.3	NC_067198	NC_067198.1	Schistosoma haematobium chromosome 3; whole genome shotgun sequence.	15695812	15679487	8465730	8482247	4852	48328128	0.32	0.32	0.18	0.18	0.35	0.9411	0.0015	0.9985	1.9347	609	566	1175	8122064	8640889	4434126	4418258	1000	25616337	0.32	0.33	0.18	0.18	0.35	0.9223	0.0812	0.9251	1.9291	14861	599	551	1150	727451	656697	375185	374858	2134191	0.34	0.31	0.17	0.19	0.36	0.8687	0.2643	0.7834	1.906	0	5651270	6098256	3086603	3065541	1000	17902670	0.31	0.36	0.16	0.17	0.33	0.8827	0.1796	0.8504	1.8897	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	17403	12090	10708	13840	8799	6965	9860	24772	6197	8865	33820	23696	20787	4902	12694	12722	13210	7734	11696	18954	8017	10374	5241	21129	8986	5454	10169	13472	18803	8947	12882	11377	6711	19388	17382	6759	6690	2457	8809	3243	4815	2320	30326	3060	5212	14449	2736	11014	11829	16111	5789	2404	24119	7776	3494	11540	4412	2296	3217	8780	22038	9851	8918	6511
GCF_000699445.3	NC_067199	NC_067199.1	Schistosoma haematobium chromosome 4; whole genome shotgun sequence.	15203253	15278889	8142126	8146368	1100	46771736	0.33	0.33	0.17	0.17	0.35	0.9401	0.0027	0.9973	1.9325	573	484	1057	8035633	8577676	4341948	4293680	500	25249437	0.32	0.33	0.18	0.18	0.35	0.9237	0.0744	0.9309	1.9287	93439	564	476	1040	674754	613567	347638	345984	1981943	0.34	0.31	0.17	0.19	0.36	0.8679	0.2587	0.7862	1.9078	0	5600108	6073679	3035220	3000939	500	17710446	0.31	0.36	0.16	0.16	0.33	0.8845	0.1735	0.855	1.8896	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	15712	11159	9762	12830	8003	6144	8720	23471	5838	8419	30883	21806	19280	4411	11760	12418	12410	7305	11125	18095	7382	9426	4871	19831	8153	5289	9232	12841	17604	8334	12376	10301	6345	18218	16260	5932	6015	2325	8547	2936	4489	1984	27662	2812	4763	13469	2456	10308	11077	14800	5498	2132	21957	7222	3288	10781	4370	2058	3018	8051	20040	9885	8558	5904
GCF_000699445.3	NC_067200	NC_067200.1	Schistosoma haematobium chromosome 5; whole genome shotgun sequence.	7071025	7071903	3997496	4004229	4000	22148653	0.32	0.32	0.18	0.18	0.36	0.9387	0.0009	0.9991	1.9437	240	254	494	3713859	3948503	2099947	2079079	1000	11842388	0.31	0.33	0.18	0.18	0.36	0.9241	0.0756	0.9297	1.9349	753	234	245	479	294726	266689	145982	142842	850239	0.34	0.31	0.17	0.18	0.35	0.8624	0.2716	0.7778	1.8955	0	2557639	2763055	1461367	1444675	500	8227236	0.31	0.35	0.17	0.17	0.34	0.8948	0.1473	0.8738	1.9099	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	7273	4353	4388	5543	3342	2282	3706	10802	2348	3707	14759	8967	8584	1861	4897	4904	4956	2975	4737	7225	2827	4045	1833	8604	3214	2119	4061	5315	7902	3102	5862	3927	2618	8275	7294	2392	2436	756	3727	1077	1710	687	11584	1085	2121	5614	899	3942	4608	7045	2271	816	10338	2805	1270	4760	2021	871	1190	3605	9407	4600	3672	2505
GCF_000699445.3	NC_067201	NC_067201.1	Schistosoma haematobium chromosome 6; whole genome shotgun sequence.	8237727	8201899	4545379	4524033	500	25509538	0.32	0.32	0.18	0.18	0.36	0.9401	0.0045	0.9955	1.9389	330	314	644	4473053	4774393	2497251	2461235	500	14206432	0.32	0.33	0.18	0.18	0.35	0.9233	0.0762	0.9288	1.9325	848	322	311	633	360957	324587	182835	173118	1041497	0.34	0.31	0.17	0.18	0.35	0.8639	0.2745	0.7753	1.8954	0	3234519	3507568	1825411	1805289	0	10372787	0.31	0.35	0.17	0.17	0.34	0.8924	0.1555	0.8678	1.9056	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8835	5322	5327	6585	4146	2773	4250	12854	2989	4296	17737	10708	10391	2390	5838	6445	6121	3664	5994	8758	3648	4657	2297	10081	3889	2801	5156	6412	9622	3752	7274	5066	3202	10061	8940	2858	3215	1053	4664	1387	2148	978	14157	1390	2346	6741	1151	5051	5648	10402	2844	1128	11861	3610	1565	5615	2493	1021	1431	4126	11241	5801	4612	3097
GCF_000699445.3	NC_067202	NC_067202.1	Schistosoma haematobium chromosome 7; whole genome shotgun sequence.	6245162	6287908	3465550	3479559	3010	19481189	0.32	0.32	0.18	0.18	0.36	0.9404	0.0054	0.9946	1.9397	184	194	378	3679279	3918969	2059365	2036771	1000	11695384	0.31	0.33	0.18	0.18	0.35	0.9248	0.0737	0.9313	1.9335	4744	183	194	377	263871	236701	131920	126066	758558	0.34	0.31	0.17	0.18	0.35	0.8626	0.2789	0.7724	1.8972	0	2703521	2907751	1531008	1521108	0	8663388	0.31	0.35	0.17	0.17	0.35	0.8984	0.1333	0.8839	1.9165	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	6424	3842	3871	4945	2805	1986	3064	9417	2185	3074	12760	7351	7851	1560	4350	4763	4396	2797	4265	6331	2829	3488	1792	7010	3137	1986	3771	4723	6927	3019	5528	3538	2415	7445	6386	2277	2416	696	3435	1003	1504	532	10433	946	1706	4905	711	3748	4030	6752	2112	698	8695	2340	1002	4054	1997	725	1013	3037	8301	4651	3915	2252