GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_N Number of 'N' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_N Number of 'N' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_963082655.1	NC_081552	NC_081552.1	Stomoxys calcitrans chromosome 1; idStoCalc2.1; whole genome shotgun sequence.	82987940	83103668	52863958	52913863	95200	271964629	0.31	0.31	0.19	0.19	0.39	0.9325	0.0012	0.9988	1.964	1925	1882	3807	39963856	40209831	25521232	25355533	22200	131072652	0.31	0.3	0.2	0.2	0.4	0.9145	0.106	0.904	1.9534	634630	1411	1505	2916	1616846	1343235	1152486	1131415	5243982	0.31	0.27	0.21	0.22	0.42	0.8794	0.2721	0.7792	1.9453	3064	22478362	22891194	14406907	14315854	12400	74104717	0.31	0.35	0.17	0.17	0.34	0.868	0.2454	0.8035	1.8855	289557	293	322	615	191192	178790	115316	113837	599135	0.32	0.3	0.19	0.19	0.38	0.8736	0.2638	0.7827	1.9194	156	1498729	1521974	964646	964323	800	4950472	0.31	0.38	0.16	0.16	0.31	0.8405	0.3345	0.738	1.8445	26	29	55	816	971	1048	1344	4179	0.2	0.23	0.25	0.32	0.57	0.8876	0.2112	0.8178	1.9693	145	145	3796	3637	4639	5183	17255	0.22	0.21	0.27	0.3	0	0.57	0.92	0.0767	0.9269	1.9846	43554	41099	19193	23628	31758	30087	29303	42043	23061	27975	56451	51417	31187	16786	23078	35174	23329	27182	26288	39002	26122	23446	17312	41762	30257	25171	19462	42809	31973	23817	25319	23396	18221	35476	37936	22421	21927	21544	21635	30300	23779	15365	66768	23279	22506	27689	9991	26761	23111	33013	19807	13671	27255	21581	17230	35764	8228	10347	14844	17124	53338	15623	18143	17522
GCF_963082655.1	NC_081553	NC_081553.1	Stomoxys calcitrans chromosome 2; idStoCalc2.1; whole genome shotgun sequence.	73396649	73463400	46122887	46116077	62600	239161613	0.31	0.31	0.19	0.19	0.39	0.9384	0.0005	0.9995	1.9619	2146	2095	4241	41709793	42048356	26164367	25943151	22000	135887667	0.31	0.3	0.19	0.2	0.39	0.917	0.0965	0.9125	1.9538	52055	1796	1738	3534	1905043	1602532	1331320	1342797	6181692	0.31	0.27	0.2	0.22	0.42	0.8821	0.2553	0.7899	1.9495	35	23651448	24157771	14802710	14667332	10400	77289661	0.31	0.36	0.16	0.17	0.33	0.8641	0.2556	0.7958	1.8757	0	273	247	520	167371	155620	97923	97948	518862	0.33	0.3	0.19	0.19	0.37	0.8753	0.256	0.7879	1.9188	0	1648273	1692406	1056995	1045631	600	5443905	0.31	0.37	0.16	0.16	0.32	0.8483	0.3004	0.762	1.8508	50	62	112	1615	1907	2052	2727	8301	0.19	0.23	0.25	0.33	0.58	0.8844	0.2415	0.7921	1.9653	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	55135	46695	22257	26613	37246	34833	31420	50704	26070	35398	67320	59504	36466	19605	27182	40043	25655	33743	31430	47294	30161	28293	19674	50302	34128	29586	22993	51611	39093	28655	31822	26426	21361	42898	44807	24339	24961	24497	25380	35597	27245	17883	77827	28790	27244	32088	12176	30585	27672	39280	23292	15723	32996	24126	19916	40056	10723	12314	16962	20255	62986	20147	24217	20197
GCF_963082655.1	NC_081554	NC_081554.1	Stomoxys calcitrans chromosome 3; idStoCalc2.1; whole genome shotgun sequence.	61217395	61206379	38583966	38683561	57000	199748301	0.31	0.31	0.19	0.19	0.39	0.9402	0.0014	0.9986	1.9626	1663	1598	3261	29787321	30038495	18686892	18546050	14400	97073158	0.31	0.3	0.2	0.2	0.4	0.9152	0.1077	0.9033	1.9533	64379	1343	1255	2598	1388015	1165405	977139	979260	4509819	0.31	0.27	0.2	0.22	0.42	0.8829	0.2587	0.788	1.948	0	18214185	18581981	11458042	11358492	8800	59621500	0.31	0.36	0.16	0.17	0.33	0.8649	0.25	0.7999	1.8778	0	234	231	465	135200	126079	81819	80036	423134	0.32	0.3	0.19	0.19	0.38	0.8758	0.255	0.7889	1.9213	0	1028032	1057819	653578	653739	400	3393568	0.31	0.38	0.16	0.16	0.31	0.8484	0.3021	0.7605	1.8471	63	85	148	1978	2493	2926	3529	10926	0.18	0.23	0.27	0.32	0.59	0.8707	0.2691	0.7722	1.9513	14	14	4202	4332	2954	3660	15148	0.27	0.28	0.2	0.25	0	0.45	0.9045	0.1254	0.8862	1.9881	39369	36760	16521	20455	26964	26085	24105	36153	19223	26254	47279	45388	26025	13392	19209	29104	19443	24053	22770	34147	21777	21080	14159	36292	24604	22524	16616	38687	27873	19649	23255	19517	16059	30944	32275	18318	18231	18492	18929	26680	20274	12983	57426	20532	19674	23894	8814	21777	19602	28236	16284	11079	23839	18240	14346	29282	7260	8873	12067	15898	45727	14403	16857	14188
GCF_963082655.1	NC_081555	NC_081555.1	Stomoxys calcitrans chromosome 4; idStoCalc2.1; whole genome shotgun sequence.	57469873	57504797	35814347	35811522	47600	186648139	0.31	0.31	0.19	0.19	0.38	0.9402	0.0003	0.9997	1.9606	1713	1759	3472	31737525	31883999	19702637	19550187	16400	102890748	0.31	0.3	0.19	0.2	0.39	0.9151	0.11	0.9016	1.9514	158446	1424	1464	2888	1603034	1327230	1117817	1135222	5183303	0.31	0.27	0.2	0.22	0.42	0.8816	0.265	0.7839	1.9467	277	16212261	16535242	10074364	9966538	9200	52797605	0.31	0.36	0.16	0.17	0.33	0.8615	0.2665	0.788	1.8697	704069	191	170	361	107740	96530	60644	61631	326545	0.33	0.3	0.18	0.19	0.37	0.8715	0.2651	0.7818	1.9125	0	1574129	1607160	968626	978021	1200	5129136	0.32	0.37	0.16	0.16	0.32	0.8562	0.2738	0.7822	1.8589	73	70	143	1994	2377	2721	3390	10482	0.19	0.23	0.25	0.32	0.58	0.8925	0.2513	0.7836	1.9618	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	45080	39619	18757	22896	32303	30465	27122	41511	22032	28986	56062	55122	30227	15745	23235	33616	21629	28968	24300	38722	25183	24447	16267	42527	28827	24480	19037	42183	31894	23810	25380	22315	17809	35342	37817	20738	21469	21141	20428	29335	23373	14768	66182	24605	22949	27080	10195	25904	23738	32838	19143	13723	27639	20931	16953	34535	8066	10400	14404	16568	51638	15951	19136	16737
GCF_963082655.1	NC_081556	NC_081556.1	Stomoxys calcitrans chromosome 5; idStoCalc2.1; whole genome shotgun sequence.	49718713	49728170	31386491	31423258	36400	162293032	0.31	0.31	0.19	0.19	0.39	0.9412	0.0007	0.9993	1.9628	1711	1705	3416	29368979	29605891	18530394	18409106	14600	95928970	0.31	0.3	0.19	0.2	0.39	0.9173	0.0987	0.9105	1.9546	221267	1446	1404	2850	1491698	1266377	1044986	1059086	4862147	0.31	0.27	0.2	0.22	0.42	0.8813	0.2585	0.7879	1.9481	819	16392328	16745504	10343379	10266279	10200	53757690	0.31	0.36	0.16	0.17	0.33	0.8638	0.2604	0.7915	1.8776	0	196	171	367	113936	104837	64550	66543	349866	0.33	0.3	0.18	0.19	0.37	0.8731	0.2646	0.7827	1.914	48	1212298	1237462	770947	768099	800	3989606	0.31	0.37	0.16	0.16	0.32	0.8556	0.2836	0.7745	1.8599	55	90	145	2005	2459	2830	3426	10720	0.19	0.23	0.26	0.32	0.58	0.8832	0.2401	0.7929	1.9624	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	43287	37331	16919	20384	28592	27327	24316	39886	20451	28591	51592	46735	27976	14434	21186	32161	20196	26234	25713	38638	24423	22131	15527	38441	26463	23384	18530	42224	30578	22286	25231	21184	16924	33481	34411	19683	19740	19157	20206	28017	21646	14431	62068	23383	22311	24855	9531	24440	21804	30113	18025	12132	26125	18675	16392	30935	8002	9799	13155	15969	47991	15745	19478	16046