GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_N Number of 'N' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_N Number of 'N' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_N Number of 'N' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_002237135.1	NC_051846	NC_051846.1	Teleopsis dalmanni isolate 2A chromosome 1; ASM223713v2; whole genome shotgun sequence.	81818286	81814684	35360497	35306303	1134395	235434165	0.35	0.35	0.15	0.15	0.3	0.9366	0.0008	0.9992	1.8811	4979	5065	10044	28186761	27882816	12016367	12116072	190550	80392566	0.35	0.32	0.16	0.17	0.33	0.9009	0.1389	0.8765	1.9007	314384	4471	4546	9017	4440702	3598431	2443961	2599298	0	13082392	0.34	0.28	0.18	0.2	0.38	0.8751	0.2836	0.7706	1.9213	122	14229606	14697402	5724581	5658394	115070	40425053	0.37	0.41	0.11	0.12	0.22	0.8073	0.2956	0.7681	1.7238	0	268	275	543	120910	107414	52647	58430	339401	0.35	0.32	0.15	0.17	0.33	0.8555	0.2795	0.773	1.8704	0	443286	465086	172947	171341	1389	1254049	0.37	0.41	0.1	0.12	0.22	0.7986	0.2987	0.764	1.718	68	62	130	1851	2162	2438	3068	9519	0.2	0.23	0.25	0.32	0.57	0.892	0.2316	0.8	1.9654	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	108940	95342	69275	73554	92154	55110	69603	124813	33804	60513	165230	148758	84938	42491	68670	89568	52622	60659	59465	112142	53251	62291	31249	111456	65216	40190	55621	93570	95765	54218	60696	62337	36627	113701	109481	48383	51398	17543	60741	32532	49686	30863	207798	37646	52515	80008	17103	65820	59660	77216	37562	33188	113765	38476	29614	79938	28429	19489	26625	53116	140423	57452	49082	41836
GCF_002237135.1	NC_051847	NC_051847.1	Teleopsis dalmanni isolate 2A chromosome 2; ASM223713v2; whole genome shotgun sequence.	86429774	86556373	35998919	35991457	1026653	246003176	0.35	0.35	0.15	0.15	0.29	0.936	0.0008	0.9992	1.8719	5777	5973	11750	36079868	35826418	15056115	15209059	232096	102403556	0.35	0.33	0.16	0.17	0.32	0.901	0.1228	0.8895	1.8938	158119	5176	5343	10519	5361369	4367391	2867767	3079725	1	15676253	0.34	0.28	0.18	0.2	0.38	0.8748	0.278	0.7737	1.9205	595	17612602	18265254	6929792	6865063	142980	49815691	0.37	0.41	0.1	0.12	0.22	0.8045	0.2931	0.7695	1.7181	12892	235	272	507	125408	109950	54619	59444	349421	0.36	0.32	0.15	0.17	0.32	0.8569	0.2755	0.7742	1.8727	0	598982	622622	239252	238486	700	1700042	0.36	0.41	0.11	0.12	0.23	0.8147	0.2814	0.7746	1.7431	141	140	281	3881	4774	5429	6775	20859	0.19	0.23	0.26	0.32	0.58	0.8835	0.2385	0.7952	1.9609	8	15	23	597	629	711	800	2737	0.22	0.23	0.26	0.29	0	0.55	0.8882	0.0849	0.9192	1.9904	135457	115111	81948	88595	104941	63506	80740	151404	39994	73644	202274	176243	97830	50689	81988	106855	63543	71258	71989	141081	63117	74275	36186	132478	75988	47833	65776	112848	120212	63331	71275	74106	41701	143244	131681	54177	60521	20972	74232	37414	59224	35880	254728	43325	63936	95828	19716	78565	71062	91537	44459	37336	138487	44481	34888	89289	36806	22744	30236	63484	167631	76059	63985	47918
GCF_002237135.1	NC_051848	NC_051848.1	Teleopsis dalmanni isolate 2A chromosome X; ASM223713v2; whole genome shotgun sequence.	35635877	35653073	15378365	15348924	183319	102199558	0.35	0.35	0.15	0.15	0.3	0.9416	0.0012	0.9988	1.882	2058	1946	4004	13567543	13717249	5894365	5924382	25214	39128753	0.35	0.33	0.16	0.17	0.32	0.9018	0.121	0.8909	1.8961	18772	1752	1698	3450	1783476	1449208	983530	1052093	0	5268307	0.33	0.28	0.18	0.21	0.39	0.8779	0.2767	0.7745	1.9261	2	7719592	8079782	3233043	3182290	20994	22235701	0.36	0.41	0.11	0.12	0.23	0.8199	0.2745	0.7816	1.7468	0	246	186	432	140917	123596	60475	66062	391050	0.36	0.32	0.15	0.17	0.32	0.8561	0.269	0.7793	1.8685	20	416396	447174	172311	172456	500	1208837	0.36	0.41	0.11	0.12	0.23	0.8035	0.3054	0.7582	1.7365	26	23	49	649	787	968	1206	3610	0.18	0.22	0.27	0.33	0.6	0.8707	0.2698	0.7732	1.9463	0	5	5	130	135	155	175	595	0.22	0.23	0.26	0.29	0	0.55	0.8917	0.0795	0.9243	1.9898	45706	40604	27463	29869	34441	23101	26927	49890	13924	23889	66721	59731	33245	17265	27741	36138	21579	25031	24681	43528	22392	23835	12588	45184	27028	16484	21891	38768	38391	20160	25431	25003	15567	46571	43100	19862	21113	7166	24325	13580	20110	13036	82811	14808	21556	33580	6971	25516	23581	31360	15741	13289	42998	15071	12447	30406	11877	8378	11118	21563	55178	24185	20813	15902