Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of āGā + āCā nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GCF_000002335.3 | NC_007416 | NC_007416.3 | Tribolium castaneum strain Georgia GA2 linkage group LGX; Tcas5.2; whole genome shotgun sequence. | 2359925 | 2363995 | 1354135 | 1348542 | 1249863 | 8676460 | 0.27 | 0.27 | 0.16 | 0.16 | 0.14 | 0.31 | 0.9531 | 0.0029 | 0.9971 | 1.8577 | 374 | 370 | 744 | 1806609 | 1824933 | 1069768 | 1088951 | 122456 | 5912717 | 0.3 | 0.3 | 0.19 | 0.2 | 0.01 | 0.39 | 0.9173 | 0.0997 | 0.9093 | 1.9507 | 436 | 318 | 328 | 646 | 348093 | 281272 | 282383 | 283679 | 17 | 1195444 | 0.29 | 0.24 | 0.23 | 0.24 | 0 | 0.46 | 0.8807 | 0.279 | 0.7722 | 1.9559 | 8 | 950085 | 1000595 | 504304 | 510220 | 54083 | 3019287 | 0.28 | 0.36 | 0.16 | 0.19 | 0.01 | 0.35 | 0.8317 | 0.3949 | 0.7025 | 1.8628 | 0 | 52 | 32 | 84 | 21404 | 21333 | 12527 | 12810 | 0 | 68074 | 0.3 | 0.31 | 0.19 | 0.2 | 0 | 0.39 | 0.8629 | 0.3189 | 0.7539 | 1.9042 | 0 | 8601 | 9218 | 4371 | 4522 | 196 | 26908 | 0.3 | 0.37 | 0.15 | 0.18 | 0 | 0.33 | 0.8353 | 0.3595 | 0.7218 | 1.8607 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 7410 | 9739 | 3577 | 5770 | 5785 | 7694 | 5090 | 8304 | 5309 | 5819 | 8745 | 11513 | 6270 | 7103 | 5866 | 9400 | 3997 | 6036 | 7027 | 8587 | 6140 | 3899 | 5467 | 6752 | 6399 | 6028 | 3775 | 8275 | 4628 | 6126 | 6385 | 5355 | 5621 | 5461 | 7488 | 8009 | 5720 | 5760 | 5762 | 6222 | 5575 | 4662 | 14601 | 5505 | 5023 | 6563 | 5048 | 5946 | 4973 | 4404 | 6643 | 5437 | 6310 | 4442 | 4578 | 6413 | 2297 | 4878 | 6301 | 3792 | 10088 | 3735 | 4721 | 6896 |
GCF_000002335.3 | NC_007417 | NC_007417.3 | Tribolium castaneum strain Georgia GA2 linkage group LG2; Tcas5.2; whole genome shotgun sequence. | 4730756 | 4747146 | 2538555 | 2539890 | 709169 | 15265516 | 0.31 | 0.31 | 0.17 | 0.17 | 0.05 | 0.33 | 0.9417 | 0.002 | 0.998 | 1.9087 | 743 | 749 | 1492 | 3478767 | 3515831 | 1903366 | 1968950 | 295888 | 11162802 | 0.31 | 0.3 | 0.18 | 0.2 | 0.01 | 0.38 | 0.9136 | 0.1066 | 0.9027 | 1.9412 | 12850 | 670 | 648 | 1318 | 593184 | 502987 | 443892 | 468136 | 0 | 2008199 | 0.3 | 0.26 | 0.21 | 0.23 | 0 | 0.45 | 0.8791 | 0.2799 | 0.7723 | 1.9492 | 831 | 1799442 | 1888881 | 905591 | 927118 | 220672 | 5741704 | 0.31 | 0.37 | 0.14 | 0.17 | 0 | 0.32 | 0.8228 | 0.3779 | 0.7151 | 1.8351 | 0 | 57 | 63 | 120 | 38526 | 37596 | 21709 | 22698 | 0 | 120529 | 0.31 | 0.31 | 0.18 | 0.19 | 0 | 0.38 | 0.8788 | 0.2306 | 0.8067 | 1.9206 | 0 | 32934 | 34371 | 16494 | 16539 | 420 | 100758 | 0.32 | 0.37 | 0.14 | 0.16 | 0 | 0.3 | 0.8251 | 0.3255 | 0.7464 | 1.8374 | 0 | 11 | 18 | 29 | 382 | 496 | 576 | 698 | 0 | 2152 | 0.18 | 0.23 | 0.27 | 0.32 | 0 | 0.59 | 0.8856 | 0.235 | 0.7951 | 1.9569 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 12811 | 15276 | 5773 | 9697 | 9307 | 11981 | 8596 | 16573 | 8167 | 10401 | 16331 | 20491 | 10453 | 10534 | 10151 | 15005 | 6721 | 11017 | 11919 | 17949 | 9272 | 7215 | 8448 | 12656 | 10073 | 9179 | 5869 | 16069 | 8734 | 10897 | 10934 | 9713 | 9275 | 8731 | 11954 | 12747 | 9239 | 8352 | 9913 | 10101 | 8377 | 6552 | 27548 | 8601 | 8021 | 12371 | 8357 | 10116 | 9305 | 7598 | 10199 | 7865 | 11397 | 6988 | 7655 | 10083 | 3421 | 7097 | 8700 | 6157 | 17030 | 6630 | 8156 | 10519 |
GCF_000002335.3 | NC_007418 | NC_007418.3 | Tribolium castaneum strain Georgia GA2 linkage group LG3; Tcas5.2; whole genome shotgun sequence. | 10056463 | 10056910 | 4750899 | 4738687 | 1778328 | 31381287 | 0.32 | 0.32 | 0.15 | 0.15 | 0.06 | 0.3 | 0.945 | 0.0013 | 0.9987 | 1.8764 | 968 | 958 | 1926 | 7572201 | 7699603 | 3642100 | 3771412 | 617444 | 23302760 | 0.32 | 0.31 | 0.17 | 0.19 | 0.01 | 0.36 | 0.9092 | 0.1104 | 0.9002 | 1.9219 | 13679 | 813 | 821 | 1634 | 806112 | 648594 | 577658 | 621168 | 21 | 2653553 | 0.3 | 0.25 | 0.21 | 0.23 | 0 | 0.44 | 0.878 | 0.2914 | 0.764 | 1.9471 | 42 | 4366669 | 4558731 | 1922422 | 1972463 | 473441 | 13293726 | 0.31 | 0.38 | 0.14 | 0.16 | 0.01 | 0.3 | 0.8254 | 0.3545 | 0.7337 | 1.8161 | 0 | 117 | 99 | 216 | 54753 | 54236 | 28215 | 31227 | 0 | 168431 | 0.32 | 0.31 | 0.17 | 0.2 | 0 | 0.37 | 0.8673 | 0.274 | 0.7786 | 1.9098 | 0 | 155600 | 157786 | 73985 | 74574 | 4133 | 466078 | 0.31 | 0.4 | 0.12 | 0.16 | 0 | 0.28 | 0.8218 | 0.3953 | 0.702 | 1.7987 | 0 | 27 | 20 | 47 | 614 | 795 | 898 | 1122 | 0 | 3429 | 0.18 | 0.23 | 0.26 | 0.33 | 0 | 0.59 | 0.8855 | 0.2806 | 0.7633 | 1.9543 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 17024 | 25214 | 7795 | 12560 | 11746 | 16777 | 11037 | 20243 | 10926 | 13857 | 21450 | 27837 | 13805 | 13531 | 13718 | 20943 | 8978 | 14799 | 15007 | 22236 | 13386 | 9236 | 11119 | 16228 | 14186 | 12236 | 7980 | 21632 | 10813 | 14134 | 13698 | 12098 | 11396 | 11669 | 15963 | 15894 | 12137 | 10890 | 12546 | 12984 | 11030 | 8224 | 38727 | 10869 | 10421 | 16006 | 10597 | 15309 | 11699 | 9572 | 12642 | 9613 | 14771 | 9304 | 11731 | 13849 | 4860 | 8737 | 11086 | 7481 | 22821 | 8643 | 11465 | 12768 |
GCF_000002335.3 | NC_007419 | NC_007419.2 | Tribolium castaneum strain Georgia GA2 linkage group LG4; Tcas5.2; whole genome shotgun sequence. | 3743006 | 3737182 | 2076443 | 2075982 | 658153 | 12290766 | 0.3 | 0.3 | 0.17 | 0.17 | 0.05 | 0.34 | 0.9485 | 0.0009 | 0.9991 | 1.9114 | 693 | 648 | 1341 | 2808283 | 2821848 | 1591423 | 1645181 | 257025 | 9123760 | 0.31 | 0.3 | 0.19 | 0.2 | 0 | 0.39 | 0.9133 | 0.1087 | 0.9009 | 1.948 | 21051 | 638 | 577 | 1215 | 562139 | 469302 | 424599 | 445978 | 1 | 1902019 | 0.3 | 0.25 | 0.22 | 0.23 | 0 | 0.45 | 0.8796 | 0.2836 | 0.7695 | 1.9503 | 4 | 1388696 | 1453456 | 696412 | 718623 | 95896 | 4353083 | 0.31 | 0.37 | 0.14 | 0.17 | 0 | 0.32 | 0.8205 | 0.3927 | 0.7051 | 1.8341 | 0 | 54 | 43 | 97 | 30796 | 30970 | 17752 | 18855 | 0 | 98373 | 0.3 | 0.31 | 0.19 | 0.2 | 0 | 0.39 | 0.8759 | 0.2446 | 0.7977 | 1.9264 | 0 | 32299 | 34745 | 17215 | 17482 | 3921 | 105662 | 0.31 | 0.38 | 0.14 | 0.17 | 0.01 | 0.31 | 0.8179 | 0.3688 | 0.72 | 1.8249 | 0 | 2 | 6 | 8 | 115 | 130 | 149 | 188 | 0 | 582 | 0.2 | 0.23 | 0.25 | 0.32 | 0 | 0.57 | 0.8953 | 0.2189 | 0.8085 | 1.9654 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 11955 | 15382 | 5443 | 9060 | 8500 | 11856 | 7718 | 14842 | 7968 | 9694 | 15364 | 19153 | 9739 | 10512 | 9414 | 14088 | 6227 | 10354 | 11569 | 16580 | 8670 | 7052 | 8041 | 11557 | 9531 | 9040 | 5366 | 15098 | 7927 | 10700 | 10411 | 8768 | 9086 | 8125 | 11223 | 11945 | 8951 | 8444 | 9393 | 9619 | 7691 | 6123 | 26478 | 8541 | 7258 | 11713 | 8056 | 9424 | 8546 | 7072 | 9848 | 7496 | 10768 | 6651 | 7308 | 9631 | 3205 | 6819 | 8909 | 5784 | 16457 | 6202 | 7662 | 10263 |
GCF_000002335.3 | NC_007420 | NC_007420.3 | Tribolium castaneum strain Georgia GA2 linkage group LG5; Tcas5.2; whole genome shotgun sequence. | 4653551 | 4639180 | 2518665 | 2526023 | 1122139 | 15459558 | 0.3 | 0.3 | 0.16 | 0.16 | 0.07 | 0.33 | 0.9403 | 0.003 | 0.997 | 1.896 | 834 | 831 | 1665 | 3505340 | 3526550 | 1940425 | 2021512 | 288841 | 11282668 | 0.31 | 0.3 | 0.18 | 0.2 | 0 | 0.38 | 0.9136 | 0.1099 | 0.8998 | 1.9464 | 3330 | 764 | 748 | 1512 | 687171 | 566033 | 529430 | 559930 | 0 | 2342564 | 0.3 | 0.25 | 0.22 | 0.24 | 0 | 0.45 | 0.8793 | 0.286 | 0.7679 | 1.9495 | 164 | 1831896 | 1927383 | 898750 | 927825 | 116957 | 5702811 | 0.31 | 0.37 | 0.14 | 0.17 | 0 | 0.32 | 0.8232 | 0.387 | 0.7089 | 1.8332 | 59 | 57 | 55 | 112 | 31825 | 33814 | 17809 | 18921 | 0 | 102369 | 0.31 | 0.32 | 0.17 | 0.2 | 0 | 0.37 | 0.8728 | 0.27 | 0.7831 | 1.9139 | 0 | 48274 | 50260 | 24895 | 25592 | 2060 | 151081 | 0.3 | 0.38 | 0.13 | 0.17 | 0.01 | 0.31 | 0.8244 | 0.3581 | 0.7215 | 1.8244 | 0 | 15 | 11 | 26 | 363 | 452 | 505 | 619 | 0 | 1939 | 0.19 | 0.23 | 0.26 | 0.32 | 0 | 0.58 | 0.8741 | 0.2626 | 0.7757 | 1.9633 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 14691 | 19594 | 6586 | 11001 | 10649 | 15683 | 9683 | 17316 | 10285 | 12196 | 17849 | 23315 | 12000 | 12953 | 12051 | 17653 | 8007 | 12920 | 13964 | 19635 | 11533 | 8368 | 9938 | 14140 | 12411 | 11285 | 6522 | 17936 | 9270 | 13005 | 12219 | 10474 | 10597 | 9717 | 14034 | 15037 | 10920 | 10721 | 11206 | 12111 | 10339 | 7936 | 31572 | 10705 | 9565 | 13425 | 10591 | 12107 | 10249 | 8611 | 12129 | 9533 | 12130 | 8755 | 9918 | 12180 | 3930 | 8821 | 10872 | 7213 | 19260 | 7315 | 9816 | 12074 |
GCF_000002335.3 | NC_007421 | NC_007421.3 | Tribolium castaneum strain Georgia GA2 linkage group LG6; Tcas5.2; whole genome shotgun sequence. | 2679245 | 2694249 | 1303799 | 1306476 | 2102629 | 10086398 | 0.27 | 0.27 | 0.13 | 0.13 | 0.21 | 0.26 | 0.9384 | 0.0038 | 0.9962 | 1.7802 | 439 | 443 | 882 | 1973820 | 1985394 | 996892 | 1022684 | 278280 | 6257070 | 0.31 | 0.3 | 0.18 | 0.19 | 0.02 | 0.37 | 0.9071 | 0.1175 | 0.8941 | 1.9242 | 21363 | 381 | 400 | 781 | 334879 | 283160 | 263431 | 275725 | 1 | 1157196 | 0.29 | 0.25 | 0.22 | 0.24 | 0 | 0.46 | 0.8783 | 0.2932 | 0.7627 | 1.9498 | 0 | 1076255 | 1121655 | 459246 | 467282 | 209616 | 3334054 | 0.31 | 0.37 | 0.14 | 0.17 | 0.01 | 0.31 | 0.8173 | 0.4134 | 0.6968 | 1.8066 | 0 | 31 | 28 | 59 | 10713 | 10145 | 5481 | 5870 | 0 | 32209 | 0.32 | 0.31 | 0.17 | 0.2 | 0 | 0.37 | 0.8647 | 0.3165 | 0.7454 | 1.9008 | 0 | 39525 | 40493 | 17748 | 18121 | 7876 | 123763 | 0.33 | 0.37 | 0.12 | 0.15 | 0.03 | 0.27 | 0.8118 | 0.3268 | 0.7465 | 1.7781 | 0 | 7 | 2 | 9 | 124 | 148 | 170 | 222 | 0 | 664 | 0.19 | 0.22 | 0.26 | 0.33 | 0 | 0.59 | 0.8879 | 0.253 | 0.7827 | 1.9585 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 7281 | 9473 | 3029 | 5107 | 4705 | 7371 | 3858 | 9337 | 5046 | 6407 | 8988 | 10780 | 6042 | 6665 | 5788 | 8584 | 3114 | 6851 | 7059 | 10483 | 5013 | 4166 | 4892 | 6510 | 5175 | 6177 | 3136 | 10073 | 4304 | 5719 | 6867 | 5031 | 5681 | 4454 | 6823 | 7292 | 5419 | 5667 | 5752 | 6589 | 4335 | 4523 | 16017 | 5342 | 4500 | 6777 | 5439 | 5202 | 5452 | 4077 | 6423 | 4962 | 5517 | 3785 | 4778 | 6124 | 1742 | 4483 | 5343 | 3932 | 9983 | 3427 | 5321 | 6472 |
GCF_000002335.3 | NC_007422 | NC_007422.5 | Tribolium castaneum strain Georgia GA2 linkage group LG7; Tcas5.2; whole genome shotgun sequence. | 4930029 | 4912614 | 2674152 | 2669051 | 1297017 | 16482863 | 0.3 | 0.3 | 0.16 | 0.16 | 0.08 | 0.32 | 0.946 | 0.0027 | 0.9973 | 1.8923 | 938 | 882 | 1820 | 3823892 | 3819440 | 2109685 | 2182832 | 219244 | 12155093 | 0.31 | 0.3 | 0.19 | 0.2 | 0 | 0.38 | 0.9128 | 0.1205 | 0.8914 | 1.9457 | 7336 | 826 | 777 | 1603 | 719801 | 585709 | 538424 | 570030 | 7 | 2413971 | 0.3 | 0.25 | 0.22 | 0.24 | 0 | 0.45 | 0.8792 | 0.2918 | 0.7636 | 1.9494 | 849 | 2066923 | 2152906 | 1034035 | 1056585 | 166552 | 6477001 | 0.3 | 0.38 | 0.14 | 0.17 | 0 | 0.32 | 0.8203 | 0.3929 | 0.7056 | 1.8295 | 202 | 92 | 64 | 156 | 47697 | 46160 | 26398 | 27887 | 0 | 148142 | 0.31 | 0.31 | 0.18 | 0.2 | 0 | 0.38 | 0.8765 | 0.2401 | 0.8032 | 1.9216 | 0 | 43707 | 45989 | 23631 | 24718 | 3623 | 141668 | 0.31 | 0.37 | 0.14 | 0.17 | 0.01 | 0.31 | 0.8157 | 0.3543 | 0.7288 | 1.8264 | 0 | 13 | 26 | 39 | 515 | 642 | 771 | 963 | 0 | 2891 | 0.18 | 0.22 | 0.27 | 0.33 | 0 | 0.6 | 0.8827 | 0.2524 | 0.7838 | 1.9524 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 15266 | 20079 | 6998 | 11420 | 10836 | 15861 | 10016 | 18959 | 10031 | 12338 | 18956 | 25396 | 11901 | 12663 | 11822 | 18377 | 7797 | 13504 | 14210 | 20259 | 11700 | 8628 | 10253 | 14607 | 12602 | 11406 | 7042 | 18508 | 9775 | 12850 | 13305 | 10842 | 11399 | 10379 | 14610 | 15752 | 11134 | 10788 | 11746 | 12845 | 10152 | 8179 | 34057 | 10798 | 9716 | 14188 | 10423 | 12766 | 10296 | 8803 | 11549 | 9663 | 12933 | 8434 | 9747 | 12188 | 4082 | 8564 | 10290 | 7283 | 20663 | 7694 | 10224 | 12587 |
GCF_000002335.3 | NC_007423 | NC_007423.3 | Tribolium castaneum strain Georgia GA2 linkage group LG8; Tcas5.2; whole genome shotgun sequence. | 4517115 | 4507891 | 2299270 | 2294572 | 962842 | 14581690 | 0.31 | 0.31 | 0.16 | 0.16 | 0.07 | 0.32 | 0.9381 | 0.002 | 0.998 | 1.8873 | 768 | 799 | 1567 | 3456559 | 3478481 | 1813917 | 1871832 | 332247 | 10953036 | 0.31 | 0.3 | 0.18 | 0.2 | 0.01 | 0.38 | 0.9108 | 0.1123 | 0.8983 | 1.9387 | 54447 | 693 | 714 | 1407 | 576888 | 482596 | 463655 | 485351 | 0 | 2008490 | 0.29 | 0.25 | 0.22 | 0.24 | 0 | 0.46 | 0.879 | 0.2879 | 0.7665 | 1.9523 | 79 | 1755390 | 1841200 | 793019 | 819324 | 162446 | 5371379 | 0.3 | 0.37 | 0.15 | 0.17 | 0.01 | 0.32 | 0.8229 | 0.3981 | 0.7051 | 1.8252 | 0 | 55 | 48 | 103 | 23728 | 22576 | 12347 | 13501 | 0 | 72152 | 0.33 | 0.31 | 0.17 | 0.19 | 0 | 0.37 | 0.8604 | 0.2968 | 0.7616 | 1.9059 | 0 | 48170 | 50038 | 21696 | 22355 | 12757 | 155016 | 0.33 | 0.39 | 0.12 | 0.15 | 0.01 | 0.27 | 0.8041 | 0.3875 | 0.7023 | 1.7751 | 0 | 13 | 15 | 28 | 388 | 538 | 490 | 612 | 0 | 2028 | 0.19 | 0.26 | 0.24 | 0.3 | 0 | 0.54 | 0.8871 | 0.2807 | 0.7578 | 1.9743 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 12643 | 16626 | 5366 | 8851 | 8567 | 13703 | 7690 | 14762 | 8789 | 11106 | 14548 | 19487 | 9794 | 11062 | 9696 | 14996 | 5950 | 11397 | 12204 | 17535 | 9572 | 7229 | 8948 | 10988 | 10274 | 10476 | 5753 | 16239 | 7437 | 10713 | 11113 | 8951 | 9795 | 7730 | 11292 | 13212 | 9636 | 10214 | 9996 | 11868 | 8153 | 7660 | 26640 | 9512 | 8021 | 11848 | 9843 | 9477 | 8754 | 7319 | 10684 | 8431 | 9650 | 6937 | 8386 | 10508 | 3291 | 7946 | 9614 | 6466 | 16949 | 5740 | 8411 | 11153 |
GCF_000002335.3 | NC_007424 | NC_007424.3 | Tribolium castaneum strain Georgia GA2 linkage group LG9; Tcas5.2; whole genome shotgun sequence. | 4972888 | 4947637 | 2550886 | 2535607 | 1177562 | 16184580 | 0.31 | 0.31 | 0.16 | 0.16 | 0.07 | 0.31 | 0.9386 | 0.0055 | 0.9945 | 1.8849 | 655 | 668 | 1323 | 3965904 | 4009145 | 2085609 | 2146203 | 466093 | 12672954 | 0.31 | 0.3 | 0.18 | 0.2 | 0.01 | 0.38 | 0.9137 | 0.1062 | 0.9032 | 1.9374 | 3441 | 589 | 571 | 1160 | 555368 | 459770 | 452651 | 470957 | 6 | 1938752 | 0.29 | 0.25 | 0.23 | 0.24 | 0 | 0.47 | 0.8807 | 0.2814 | 0.7709 | 1.9543 | 0 | 2110333 | 2210167 | 989619 | 1014100 | 352766 | 6676985 | 0.3 | 0.37 | 0.15 | 0.18 | 0.01 | 0.33 | 0.8287 | 0.3856 | 0.7121 | 1.8378 | 0 | 46 | 57 | 103 | 28501 | 27455 | 14595 | 15663 | 0 | 86214 | 0.32 | 0.3 | 0.17 | 0.2 | 0 | 0.37 | 0.8678 | 0.2565 | 0.7938 | 1.9101 | 0 | 40155 | 41867 | 20109 | 19976 | 513 | 122620 | 0.32 | 0.39 | 0.13 | 0.16 | 0 | 0.29 | 0.8205 | 0.363 | 0.7224 | 1.804 | 0 | 13 | 20 | 33 | 466 | 499 | 629 | 830 | 0 | 2424 | 0.2 | 0.21 | 0.25 | 0.34 | 0 | 0.59 | 0.8847 | 0.2617 | 0.7759 | 1.9519 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 11889 | 16656 | 5660 | 8821 | 8727 | 13262 | 7688 | 13757 | 8603 | 10247 | 13687 | 18333 | 10075 | 11260 | 9529 | 14211 | 6154 | 11459 | 11280 | 15507 | 10351 | 6512 | 8888 | 10611 | 10219 | 10085 | 5451 | 14540 | 6724 | 10347 | 10811 | 8836 | 9846 | 7733 | 11236 | 12541 | 9112 | 9203 | 8904 | 11181 | 8528 | 7505 | 24768 | 8924 | 7875 | 11230 | 8701 | 9478 | 8224 | 6920 | 11030 | 8729 | 9291 | 6941 | 8137 | 10386 | 3058 | 8033 | 9877 | 6210 | 15746 | 5672 | 8166 | 11059 |
GCF_000002335.3 | NC_007425 | NC_007425.3 | Tribolium castaneum strain Georgia GA2 linkage group LG10; Tcas5.2; whole genome shotgun sequence. | 2304166 | 2311003 | 1080986 | 1088523 | 438000 | 7222678 | 0.32 | 0.32 | 0.15 | 0.15 | 0.06 | 0.3 | 0.9362 | 0.005 | 0.9951 | 1.8734 | 270 | 262 | 532 | 1681818 | 1720419 | 809070 | 839124 | 165459 | 5215890 | 0.31 | 0.31 | 0.18 | 0.19 | 0.02 | 0.36 | 0.9084 | 0.114 | 0.897 | 1.9231 | 1057 | 246 | 227 | 473 | 204049 | 173427 | 158619 | 168981 | 0 | 705076 | 0.29 | 0.25 | 0.22 | 0.24 | 0 | 0.46 | 0.8745 | 0.302 | 0.7572 | 1.9457 | 0 | 1045061 | 1091974 | 446192 | 457725 | 138646 | 3179598 | 0.31 | 0.38 | 0.14 | 0.17 | 0.01 | 0.3 | 0.8144 | 0.4075 | 0.6998 | 1.7979 | 0 | 20 | 22 | 42 | 9406 | 9137 | 5049 | 5602 | 0 | 29194 | 0.31 | 0.34 | 0.17 | 0.19 | 0 | 0.36 | 0.8631 | 0.2838 | 0.7641 | 1.8909 | 0 | 11676 | 11641 | 5571 | 5716 | 0 | 34604 | 0.32 | 0.37 | 0.13 | 0.18 | 0 | 0.31 | 0.8393 | 0.3422 | 0.7369 | 1.8346 | 0 | 1 | 2 | 3 | 43 | 44 | 62 | 70 | 0 | 219 | 0.2 | 0.2 | 0.28 | 0.32 | 0 | 0.6 | 0.8672 | 0.1228 | 0.8894 | 1.961 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 4592 | 5457 | 1923 | 3163 | 2986 | 4816 | 2812 | 5520 | 2860 | 3634 | 5435 | 7204 | 3525 | 3641 | 3673 | 5041 | 2086 | 4119 | 4154 | 6416 | 3189 | 2860 | 3082 | 4449 | 3407 | 3398 | 1915 | 5739 | 2908 | 3927 | 3800 | 3034 | 3507 | 2668 | 4024 | 4465 | 3348 | 3438 | 3568 | 4045 | 2720 | 2578 | 9439 | 3395 | 2624 | 4442 | 3162 | 3273 | 3258 | 2789 | 3525 | 2837 | 3561 | 2509 | 2845 | 3593 | 956 | 2511 | 3114 | 2425 | 6158 | 2062 | 2895 | 3774 |
NA | NC_003081 | NC_003081.2 | Tribolium castaneum mitochondrion; complete genome. | 6313 | 5071 | 2935 | 1562 | 0 | 15881 | 0.4 | 0.32 | 0.18 | 0.1 | 0 | 0.28 | 0.9072 | 0.4144 | 0.6677 | 1.8342 | 23 | 14 | 37 | 4622 | 5741 | 2130 | 2131 | 0 | 14624 | 0.37 | 0.38 | 0.12 | 0.13 | 0 | 0.26 | 0.8226 | 0.3939 | 0.6981 | 1.7784 | 30 | 2 | 1 | 3 | 552 | 646 | 314 | 234 | 0 | 1746 | 0.31 | 0.39 | 0.16 | 0.14 | 0 | 0.3 | 0.8618 | 0.4116 | 0.6851 | 1.8413 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 14 | 8 | 22 | 568 | 521 | 147 | 193 | 0 | 1429 | 0.4 | 0.36 | 0.1 | 0.13 | 0 | 0.24 | 0.7939 | 0.3414 | 0.7357 | 1.7528 | 1 | 0 | 2 | 2 | 677 | 886 | 148 | 343 | 0 | 2054 | 0.33 | 0.43 | 0.07 | 0.17 | 0 | 0.24 | 0.8528 | 0.5306 | 0.6 | 1.7549 | 0 | 7 | 4 | 19 | 13 | 11 | 1 | 7 | 41 | 4 | 0 | 20 | 13 | 19 | 1 | 3 | 9 | 9 | 0 | 17 | 40 | 4 | 2 | 2 | 4 | 2 | 9 | 18 | 8 | 10 | 22 | 13 | 22 | 1 | 26 | 20 | 3 | 10 | 6 | 6 | 4 | 0 | 0 | 7 | 2 | 1 | 9 | 7 | 15 | 2 | 13 | 1 | 1 | 37 | 6 | 3 | 7 | 0 | 2 | 1 | 4 | 8 | 3 | 20 | 3 |