GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_N Number of 'N' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_N Number of 'N' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_029784155.1	NC_073691	NC_073691.1	Uranotaenia lowii strain MFRU-FL chromosome 1; ASM2978415v1; whole genome shotgun sequence.	68386742	68357797	39511437	39521707	467500	216245183	0.32	0.32	0.18	0.18	0.37	0.9443	0.0003	0.9997	1.9467	2578	2621	5199	39062359	38468757	22645494	22616484	164000	122957094	0.3	0.29	0.2	0.21	0.41	0.9171	0.1071	0.9028	1.9617	52380	1891	1961	3852	1930193	1588774	1657224	1689269	6865460	0.28	0.23	0.24	0.25	0.49	0.8866	0.258	0.7886	1.9632	1384	21927549	21873865	12416530	12301135	99500	68618579	0.3	0.36	0.17	0.17	0.33	0.8637	0.2655	0.7874	1.8781	571	543	1114	394600	353802	253358	264000	1265760	0.31	0.27	0.2	0.22	0.42	0.8821	0.2299	0.8074	1.9503	583834	601034	310274	309074	2500	1806716	0.31	0.4	0.14	0.15	0.29	0.8239	0.3338	0.7353	1.8174	63	57	120	1629	2120	2315	2825	8889	0.18	0.24	0.26	0.32	0.58	0.8783	0.2702	0.7706	1.9591	8	0	8	3339	3061	2779	3280	12459	0.28	0.24	0.23	0.26	0.48	0.9073	0.1337	0.8785	1.993	45767	54954	24105	28406	38823	44031	37588	40751	35222	36955	45447	73581	36479	35939	30009	54118	26821	37592	47052	38180	48265	31741	27966	55497	46564	38172	24755	41488	24318	46621	50945	29604	29594	25032	37741	39229	30555	23063	31894	38090	36428	22760	68719	29351	29305	39111	20662	30907	25930	32071	40489	26661	21468	24971	23327	40269	9378	33810	38353	25571	55045	12905	22066	41886
GCF_029784155.1	NC_073692	NC_073692.1	Uranotaenia lowii strain MFRU-FL chromosome 2; ASM2978415v1; whole genome shotgun sequence.	140666694	140452236	77542362	77563305	915756	437140353	0.32	0.32	0.18	0.18	0.35	0.9401	0.0009	0.9991	1.9379	4320	4285	8605	74934843	73998181	41659516	41558671	262169	232413380	0.31	0.29	0.2	0.21	0.41	0.9172	0.106	0.9044	1.9595	997311	3528	3495	7023	3650634	3012700	3021542	3073624	12758500	0.28	0.24	0.23	0.25	0.48	0.8863	0.2643	0.785	1.9595	377	41949021	41862133	22748242	22563619	145021	129268036	0.31	0.37	0.16	0.16	0.32	0.8577	0.2712	0.7843	1.8653	625	568	1193	357338	320048	231154	241762	1150302	0.31	0.27	0.2	0.22	0.42	0.8814	0.2385	0.8012	1.95	601892	630725	325770	323242	1500	1883129	0.31	0.4	0.14	0.15	0.29	0.8264	0.341	0.7305	1.8218	100	113	213	2988	3592	3986	4999	15565	0.19	0.23	0.25	0.32	0.57	0.894	0.2343	0.8	1.9657	2	1	3	87	84	88	98	357	0.24	0.24	0.25	0.27	0.52	0.8808	0.0715	0.9318	1.9973	85576	102180	45762	55242	71375	81654	69424	80365	63800	68771	90545	141643	69701	63578	55096	102133	50642	67822	87411	74509	85101	56620	51650	106752	83713	68101	46160	80387	48494	85166	92449	57770	54121	48967	71629	69953	56795	41611	60115	65973	64664	40327	134229	50323	54093	77143	35375	58964	49993	62354	71381	45797	43001	46777	43324	76077	17364	57755	65641	46939	105490	23810	40186	75454
GCF_029784155.1	NC_073693	NC_073693.1	Uranotaenia lowii strain MFRU-FL chromosome 3; ASM2978415v1; whole genome shotgun sequence.	118875543	119138830	65669745	65616236	970020	370270374	0.32	0.32	0.18	0.18	0.35	0.9407	0.0015	0.9985	1.9376	3744	3801	7545	67380104	66315357	37366298	37188090	275520	208525369	0.31	0.29	0.2	0.21	0.4	0.9171	0.1072	0.9035	1.9589	261562	3083	3061	6144	3064028	2506657	2575678	2620451	10766814	0.28	0.23	0.24	0.25	0.48	0.8854	0.2626	0.7856	1.9614	33	37805327	37635006	20391883	20156960	154500	116143676	0.31	0.36	0.16	0.16	0.32	0.86	0.2662	0.7878	1.869	515	550	1065	329365	295212	211206	221656	1057439	0.31	0.27	0.2	0.22	0.42	0.8817	0.2394	0.8003	1.9493	570276	574936	299623	295173	2500	1742508	0.31	0.4	0.14	0.15	0.29	0.8249	0.3397	0.7306	1.8202	87	68	155	2179	2714	2917	3661	11471	0.19	0.24	0.25	0.32	0.57	0.8905	0.2404	0.7927	1.9666	1	0	1	29	28	29	33	119	0.24	0.24	0.24	0.28	0.52	0.8809	0.0821	0.9222	1.9971	71656	89407	37130	46666	59799	69491	59673	65494	54029	57080	73456	119796	58227	54967	47053	85373	42113	56975	73608	60318	73602	48477	43606	88079	73101	59013	38172	65931	39435	73549	79192	47129	45699	39941	59517	60342	47356	36197	50412	57403	56140	34137	110610	43023	45046	65304	30270	49540	41015	50796	61906	39896	34551	39790	37013	64714	14391	50602	58955	39982	88185	19551	33987	64458