GBRAP

Genome-Based Retrieval and Analysis Parser


MAMMALIAN : Bos_javanicus
Assembly Assembly Locus_ID Locus_ID Version Version Definition Sequence description bp_chromo_A Total number of 'A' nucleotides in the whole sequence bp_chromo_T Total number of 'T' nucleotides in the whole sequence bp_chromo_C Total number of 'C' nucleotides in the whole sequence bp_chromo_G Total number of 'G' nucleotides in the whole sequence bp_chromo_N Total number of 'N' nucleotides in the whole sequence bp_chromo_tot Total number of nucleotides in the whole sequence fr_chromo_A Frequency of 'A' nucleotides in the whole sequence fr_chromo_T Frequency of 'T' nucleotides in the whole sequence fr_chromo_C Frequency of 'C' nucleotides in the whole sequence fr_chromo_G Frequency of 'G' nucleotides in the whole sequence fr_chromo_N Frequency of 'N' nucleotides in the whole sequence GC_chromo Percentage of ā€˜Gā€™ + ā€˜Cā€™ nucleotides in the whole sequence topo_entropy_chromo Topological entropy of the whole sequence chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee shannon_chromo Shannon entropy of the whole sequence n_gene_pos Number of genes in the positive strand n_gene_neg Number of genes in the negative strand n_gene_tot Total number of genes in the chromosome bp_gene_A Number of 'A' bases in total genes bp_gene_T Number of 'T' bases in total genes bp_gene_C Number of 'C' bases in total genes bp_gene_G Number of 'G' bases in total genes bp_gene_N Number of 'N' bases in total genes bp_gene_tot Total number of bases in total genes fr_gene_A Frequency of 'A' bases among total gene bases fr_gene_T Frequency of 'T' bases among total gene bases fr_gene_C Frequency of 'C' bases among total gene bases fr_gene_G Frequency of 'G' bases among total gene bases fr_gene_N Frequency of 'N' bases among total gene bases GC_gene Percentage of 'G' and 'C' bases in total genes topo_entropy_gene Topological entropy calculated from total gene sequences chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes shannon_gene Shannon entropy score for total genes bp_gene_overlap_tot Number of bases overlapping between genes on two strands n_cds_pos Number of CDS in the positive strand n_cds_neg Number of CDS in the negative strand n_cds_tot Total number of CDS in the chromosome bp_cds_A Number of 'A' bases in total CDS (coding sequences) bp_cds_T Number of 'T' bases in total CDS bp_cds_C Number of 'C' bases in total CDS bp_cds_G Number of 'G' bases in total CDS bp_cds_N Number of 'N' bases in total CDS bp_cds_tot Total bases in total CDS fr_cds_A Frequency of 'A' bases among total CDS bases fr_cds_T Frequency of 'T' bases among total CDS bases fr_cds_C Frequency of 'C' bases among total CDS bases fr_cds_G Frequency of 'G' bases among total CDS bases fr_cds_N Frequency of 'N' bases among total CDS bases GC_cds Percentage of 'G' and 'C' bases in total CDS topo_entropy_cds Topological entropy calculated from total CDS sequences chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS shannon_cds Shannon entropy score for total CDS bp_cds_overlap_tot Number of bases overlapping between CDS on two strands bp_cds_intron_A Number of 'A' bases in total introns between CDS bp_cds_intron_T Number of 'T' bases in total introns between CDS bp_cds_intron_C Number of 'C' bases in total introns between CDS bp_cds_intron_G Number of 'G' bases in total introns between CDS bp_cds_intron_N Number of 'N' bases in total introns between CDS bp_cds_intron_tot Total bases in total introns between CDS fr_cds_intron_A Frequency of 'A' bases in total introns between CDS fr_cds_intron_T Frequency of 'T' bases in total introns between CDS fr_cds_intron_C Frequency of 'C' bases in total introns between CDS fr_cds_intron_G Frequency of 'G' bases in total introns between CDS fr_cds_intron_N Frequency of 'N' bases in total introns between CDS GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS shannon_cds_intron Shannon entropy score for total introns between CDS bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands n_ncRNA_pos Number of ncRNA in the positive strand n_ncRNA_neg Number of ncRNA in the negative strand n_ncRNA_tot Total number of ncRNA in the chromosome bp_ncRNA_A Number of 'A' bases in total ncRNA bp_ncRNA_T bp_ncRNA_T bp_ncRNA_C Number of 'C' bases in total ncRNA bp_ncRNA_G Number of 'G' bases in total ncRNA bp_ncRNA_N Number of 'N' bases in total ncRNA bp_ncRNA_tot Total bases in total ncRNA fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA shannon_ncRNA Shannon entropy score for total ncRNA bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands bp_nc_intron_A Number of 'A' bases in total introns between ncRNA bp_nc_intron_T Number of 'T' bases in total introns between ncRNA bp_nc_intron_C Number of 'C' bases in total introns between ncRNA bp_nc_intron_G Number of 'G' bases in total introns between ncRNA bp_nc_intron_N Number of 'N' bases in total introns between ncRNA bp_nc_intron_tot Total bases in total introns between ncRNA fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA shannon_nc_intron Shannon entropy score for total introns between ncRNA bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands n_tRNA_pos Number of tRNA in the positive strand n_tRNA_neg Number of tRNA in the negative strand n_tRNA_tot Total number of tRNA in the chromosome bp_tRNA_A Number of 'A' bases in total tRNA bp_tRNA_T Number of 'T' bases in total tRNA bp_tRNA_C Number of 'C' bases in total tRNA bp_tRNA_G Number of 'G' bases in total tRNA bp_tRNA_N Number of 'N' bases in total tRNA bp_tRNA_tot Total bases in total tRNA fr_tRNA_A Frequency of 'A' bases among total tRNA bases fr_tRNA_T Frequency of 'T' bases among total tRNA bases fr_tRNA_C Frequency of 'C' bases among total tRNA bases fr_tRNA_G Frequency of 'G' bases among total tRNA bases fr_tRNA_N Frequency of 'N' bases among total tRNA bases GC_tRNA Percentage of 'G' and 'C' bases in total tRNA topo_entropy_tRNA Topological entropy calculated from total tRNA sequences chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA shannon_tRNA Shannon entropy score for total tRNA bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands n_rRNA_pos Number of rRNA in the positive strand n_rRNA_neg Number of rRNA in the negative strand n_rRNA_tot Total number of rRNA in the chromosome bp_rRNA_A Number of 'A' bases in total rRNA bp_rRNA_T Number of 'T' bases in total rRNA bp_rRNA_C Number of 'C' bases in total rRNA bp_rRNA_G Number of 'G' bases in total rRNA bp_rRNA_N Number of 'N' bases in total rRNA bp_rRNA_tot Total bases in total rRNA fr_rRNA_A Frequency of 'A' bases among total rRNA bases fr_rRNA_T Frequency of 'T' bases among total rRNA bases fr_rRNA_C Frequency of 'C' bases among total rRNA bases fr_rRNA_G Frequency of 'G' bases among total rRNA bases fr_rRNA_N Frequency of 'N' bases among total rRNA bases GC_rRNA Percentage of 'G' and 'C' bases in total rRNA topo_entropy_rRNA Topological entropy calculated from total rRNA sequences chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA shannon_rRNA Shannon entropy score for total rRNA bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands ATG ATG AAG AAG GTA GTA ACT ACT GCA GCA GAG GAG GCT GCT ATT ATT TCC TCC TGG TGG AAT AAT GAA GAA TCA TCA ACG ACG AGT AGT AAC AAC TCT TCT GTG GTG TTC TTC TTT TTT CTG CTG GGT GGT CTC CTC GAT GAT CAG CAG ACC ACC CTA CTA TTG TTG TAT TAT GGA GGA ATC ATC CTT CTT GTC GTC ATA ATA ACA ACA GAC GAC CAC CAC CCC CCC TAC TAC GCC GCC AGC AGC CGC CGC AAA AAA GGC GGC TGC TGC GTT GTT GGG GGG AGA AGA TGT TGT CAT CAT TCG TCG GCG GCG TTA TTA CCT CCT AGG AGG CCA CCA TAG TAG CGG CGG CCG CCG CGT CGT CAA CAA TAA TAA TGA TGA CGA CGA
GCF_032452875.1NC_083868NC_083868.1Bos javanicus breed banteng chromosome 1; ARS-OSU_banteng_1.0; whole genome shotgun sequence.473320834705598031592839315588462001575399480.30.30.20.200.40.93920.00350.99651.97146156291244193566982101303213594673140110480679754510.270.290.220.2200.440.91850.11080.89951.969922403433402835361518308789333304341039013446500.280.230.230.2500.490.86460.31160.74991.937901348374614787541940553897138340473906590.270.310.20.2100.420.90120.16430.85611.9458013617230825207324906418155818842608711210.290.260.220.2300.450.88190.23390.80541.9562014355251501398964749969126048707980.280.30.210.2100.410.90820.13640.87981.958304446901312152916422049065320.20.230.250.3100.560.88190.21020.81721.973400112327323701190.190.230.270.3100.580.87470.15250.85841.9774010120119303417626579951130178276772797990016957119667861320860586961730590847856768113815420478597059133837393398570815017902369396910539944798336739064108222501691508732354611744779281355012638799826336585825933673443881987189955521934055420220927681293564212654
GCF_032452875.1NC_083869NC_083869.1Bos javanicus breed banteng chromosome 2; ARS-OSU_banteng_1.0; whole genome shotgun sequence.4040833440411178277534732772086101362938460.30.30.20.200.410.94160.00060.99941.97496436081251180736591976265912851189132913440639788510.260.280.220.2300.460.920.10310.90561.972799307434397831427197353679410480418999016103550.270.220.240.2600.50.86370.30710.7531.938901285319814222836902430493336950454340330.260.30.210.2200.430.89510.18050.84411.9405016016632621489821139516517817207707635480.290.260.220.2300.460.8810.2330.80531.9576014462601518806978047993498049366110.280.30.210.2100.420.90290.14910.87171.955704139801149134314871825058040.20.230.260.3100.570.88230.20450.82281.97120000000000NANANANANANANANANANA0122511590339497111973414237936972869226108747714131399378415170828461817111620908678241782855539676822616613903147008433496310420822176366242496698879047807010724597712303106114768134601012986865429802211234633466323392490050821007690711208925535394561426428947332875043272
GCF_032452875.1NC_083870NC_083870.1Bos javanicus breed banteng chromosome 3; ARS-OSU_banteng_1.0; whole genome shotgun sequence.352730883522163125279396253325372001211068520.290.290.210.2100.420.9430.00180.99821.98059219191840165763131809768712485148129154450600745930.250.270.230.2500.480.91530.12420.88841.97391663866175741191464732397549485209491347018388370.260.220.250.2700.520.86330.30770.75241.939901164073212930662857456289036720420496280.250.290.220.2400.460.89270.20410.82671.9461017519136623118422308818806818932908316690.280.250.230.2400.470.88250.22740.80781.96180946537973646698478706257033249180.270.290.220.2200.440.90220.16290.86011.9636011713825532854302500060350186220.180.230.270.3200.590.87640.24450.79111.95650000000000NANANANANANANANANANA01340616795415782461102917606115697663115521268076711418810084455377048986949013379108138582214656334119779062196661115051718576537212430101038791770047701050810956923713332680315313125945894128461234410074585310655125227642723135675625462312178108441337224396848642329659467289682703934
GCF_032452875.1NC_083871NC_083871.1Bos javanicus breed banteng chromosome 4; ARS-OSU_banteng_1.0; whole genome shotgun sequence.358214903584368224444538244774723001205874820.30.30.20.200.410.94160.0010.9991.9742607485109218327630200304991305909613463557100648808820.260.280.220.2300.460.91830.10940.90071.972816989420310730297048258417297256297601011503220.270.230.240.2600.50.86360.30420.7551.939701330911314723343942277497500690472052990.260.30.210.2200.430.90020.16750.85471.9465012813326123623723760517329517948108266180.290.260.220.2400.460.88020.24390.79791.95390169675417970651159356117344510058267200.280.30.210.2100.430.90610.15170.86941.958705140911328151216282116065840.20.230.250.3200.570.8860.20660.81991.97240000000000NANANANANANANANANANA08251101152696540567889669699255267003773955309451652029844983604360598384687562641262338527335586611354663930595618398871876397568348753692685763835785801542789077776435299032730661564171602279994892478123403694348975046708778713513905414019736000196149762246
GCF_032452875.1NC_083872NC_083872.1Bos javanicus breed banteng chromosome 5; ARS-OSU_banteng_1.0; whole genome shotgun sequence.350784273519589325205115252029352001206825700.290.290.210.2100.420.94220.00170.99831.9804822808163017031562185731121286933113321295100617954000.260.280.230.2300.460.91960.10970.89981.9744363625935911184473635416268503192502097018951920.260.220.250.2600.510.86240.3090.75161.937201134355212572698843269187643840411133250.250.290.230.2400.460.89160.20170.82861.9428017616534122601321822918462718752008163890.280.250.230.2400.470.8810.23520.80391.956601379388141245396043397412610047265000.280.290.220.2200.440.90390.14840.86961.960204341841218142615661895061050.20.230.260.3100.570.88080.19780.82751.973201012325343701190.190.210.290.3100.60.87470.08390.91951.97160137141685843468641111031810312014845611702127488175141101003250647535100741022714302115929436224836293128498935193341141452948949597312240106138969832350581049211350961413991723615953131166257130201293810271621710620120427837749740146097501012303106751321922857264667230779636295080053978
GCF_032452875.1NC_083873NC_083873.1Bos javanicus breed banteng chromosome 6; ARS-OSU_banteng_1.0; whole genome shotgun sequence.354660303544970423527137235115761001179545470.30.30.20.200.40.93990.00060.99941.970244146190215407560167131161072553811072283100539185970.270.290.210.2300.440.92010.10170.90691.96673288230427357726633722009424027125197609786780.280.230.230.2500.480.86360.30740.75311.935901057910211603370734008075879140371104660.270.310.20.2100.420.90090.15520.86331.9387011213624818623218340313026613405406339550.290.260.220.2200.440.87980.23510.80321.955801693194177577811213401128981057192930.290.30.20.200.40.90740.12990.88491.953403246781129131114081803056510.20.230.250.3200.570.88670.22350.80641.97050000000000NANANANANANANANANANA07023924524934543566988635537496352416265511990295283241545945301511867895605554299153128580054229529524227264910343664365002504539803335582759244695572534456998644427988917588549793720456572514278422620193201333455835446666314253193333815595730217246232046
GCF_032452875.1NC_083874NC_083874.1Bos javanicus breed banteng chromosome 7; ARS-OSU_banteng_1.0; whole genome shotgun sequence.320182333207435323049404230749695001102174590.290.290.210.2100.420.94620.00140.99861.9807857822167915083794165014201186651112228915200556808400.250.270.240.2400.490.91730.12020.8911.9764595636376121249457991406844552377536076019532880.250.210.270.2800.550.86130.3130.74931.9322090124731008193271011057372340100335679500.230.260.250.2600.510.88620.21870.8161.943017315632922066321320218029218291707970740.280.250.230.2400.470.88180.23760.80211.956902414569255479416354771665015082698550.270.290.220.2200.440.90620.15240.86831.961104140811161137815171847059030.20.230.260.3100.570.87890.20760.8191.971501124955597502380.210.230.250.3200.560.90140.17710.84181.9805014129160274047840511608186251251465801263013588652112327103175727727893479342161941171981652472664891388482662018312841539081025185124711120787588700434810616124841100116403755519123141068075106401510711016547311814114657742739744968129390513197116571493719898634845636058914233578254418
GCF_032452875.1NC_083875NC_083875.1Bos javanicus breed banteng chromosome 8; ARS-OSU_banteng_1.0; whole genome shotgun sequence.332979893352047423382541234543632001136555670.290.290.210.2100.410.94250.00490.99521.97764805281008145375931594602910741032110922010523168550.270.280.220.2300.450.92050.1020.9061.977658563336357693300571252805300368303573011573170.270.220.240.2600.50.86470.30670.75351.94010937727810453904695154172033960339861190.260.30.210.2200.440.90180.170.8521.9555012213926124931924857619130419561008848090.290.260.220.2300.460.88550.220.81511.9624013523221442732965207978227047384880.280.290.210.2100.430.90760.14470.87251.9653029275681392410261291040540.20.230.250.3200.570.88910.20740.81851.972400112626313601190.220.220.260.300.560.89290.07460.93061.9862084881036426595232683011042704149647024746852579758653027504900616462788702678155241286037647541602911933691631025372350178966338556149563126681970735811789743549500798833588819744261203919606583605059500922193304317475596714829714363919372518506134200450592381
GCF_032452875.1NC_083876NC_083876.1Bos javanicus breed banteng chromosome 9; ARS-OSU_banteng_1.0; whole genome shotgun sequence.312134003133283620773359208384351001041581300.30.30.20.200.40.94070.00350.99651.9707378380758128104871388912489187629226731100448452040.270.290.210.2200.440.92150.10270.9061.97121238023823547323343119484520803221684508531530.290.240.230.2500.480.86510.30660.75361.93750917375210118912633784265743640322048700.280.320.190.2100.40.90380.15270.86511.944309711321017420216741112893213243706029820.290.260.220.2300.450.88330.23910.8011.957601276517128974284062484645610042534390.290.30.20.2100.410.90830.12830.8861.95550412667972114412211545048820.20.230.250.3200.570.88390.21880.81031.971800112224314001170.190.210.260.3400.610.86820.17020.84581.959206214798022683996488073144959460946415504436879044810212438164533439056384924501583952851501146228629440325574544306756824528448433542958495748534247501231635640550622747877483843463357386966283698362717072694307849224563563013982663300113945066199241541871
GCF_032452875.1NC_083877NC_083877.1Bos javanicus breed banteng chromosome 10; ARS-OSU_banteng_1.0; whole genome shotgun sequence.299954933021680421285928213338901001028322150.290.290.210.2100.410.94440.00480.99521.97886367201356149573591643522411033250114956640539214970.270.290.220.2300.450.91880.11320.89691.976424929454536990404851348741390714399546015438520.280.230.240.2600.50.86360.31490.7481.939701052645711755817756042279075510377502470.260.30.210.2200.430.89610.18710.8391.9467012114426520079419389316029116552107204990.280.250.230.2400.470.88560.21910.81441.9640920451958510681364691224032515490.270.290.220.2200.440.90620.15120.86881.965904736831168142815151958060690.190.240.250.3200.570.88390.23950.79351.96730000000000NANANANANANANANANANA011578140673881763893021465994757411909810083719613313839634966810799385671120393308307172314895991182671568387784390773050569862839579976361471288688759761797565603118221013843461199993147933545178381109467066565284142564788987487421087622125048458623218233307671973165
GCF_032452875.1NC_083878NC_083878.1Bos javanicus breed banteng chromosome 11; ARS-OSU_banteng_1.0; whole genome shotgun sequence.305735883057127722941568229320142001070186470.290.290.210.2100.430.9440.00020.99981.98536826471329137726621522049211098157115492730516405840.250.270.240.2500.490.91930.1090.90061.974758690469452921386235330540423600424236015646110.260.220.260.2700.530.8620.30190.75661.935324963492510834508763088679839440360842630.240.280.240.2500.480.89160.19780.83071.9414016815232023812424168421262521792109103540.270.250.240.2400.480.88230.22570.81041.9611012425811318176917740929047044075440.260.280.220.2300.460.9040.15130.86911.965404336791110136514301831057360.190.240.250.3200.570.87550.24940.78791.96840000000000NANANANANANANANANANA01056313492339665529286148789636600495211076860071172982144599625776427862115389105708818134504610205751316310944239756927431510328817573096551391785849950823411988566414160111735887104701128389215034892410379634263343611587339261042292151102618726703668129628010256667053639
GCF_032452875.1NC_083879NC_083879.1Bos javanicus breed banteng chromosome 12; ARS-OSU_banteng_1.0; whole genome shotgun sequence.26062428261461451765488717685432400875492920.30.30.20.200.40.94180.00250.99751.973325298623101291271106487872956817599297100360890830.270.280.220.2300.450.92080.10260.90571.97392275818916435317858314729516727217354806666980.280.230.230.2500.490.86610.30160.7561.936706981771774470249729205196190100248956830.270.310.210.2200.420.90320.16510.85511.948201099720618736718661414646015042806708690.280.260.220.2400.460.88220.22790.81011.9547010966301156179770927786289038100250.280.30.210.2200.420.9040.14470.87571.95470353065953108911891486047170.20.230.250.3200.570.87910.19740.82761.97390000000000NANANANANANANANANANA0442263591561284036755938358533593846393533025942363019612920387333334765402236686798208537613605648236521729335322444215355133332820217340784176341042612592486844542113606643513408254934144889280227801644259721463601367641839382501268311073371142529561420
GCF_032452875.1NC_083880NC_083880.1Bos javanicus breed banteng chromosome 13; ARS-OSU_banteng_1.0; whole genome shotgun sequence.23440873235618131818799418235631200834265110.280.280.220.2200.440.94690.00390.99611.9884587519110612152997133257299830103101866460454954750.250.270.230.2500.480.92080.10160.90661.980486897383346729287574232508318649323687011624180.260.210.260.2700.530.86230.31380.74851.9352082973449266189658539968451980309941300.240.280.230.2400.470.89660.18370.84181.9534017013130123517722980920781921228808850930.270.250.240.2500.490.88470.22940.80831.96490779976818865604784610664028142890.260.280.230.2300.460.90220.16670.85731.96590303868965115012611578049540.190.230.250.3200.570.88130.20710.81951.97030000000000NANANANANANANANANANA0773310836230148167366120517175417571547787414988595940369045596017519387276086455113490386274465449123396936269746332745783458524977486625746262768762629262403610819854446337647886766723403686677344437436129054939250975917286871212875286521922305907159048212801
GCF_032452875.1NC_083881NC_083881.1Bos javanicus breed banteng chromosome 14; ARS-OSU_banteng_1.0; whole genome shotgun sequence.24117420241972181697722916988089200822801560.290.290.210.2100.410.94540.0020.9981.97793633447071006152510989918745620377008330362084790.260.270.230.2400.470.91930.10510.90371.9703884022521243718907416068119764220277407501710.260.220.250.2600.510.86280.29540.7611.93362769825607712575506981552482130250131630.250.290.220.2300.460.89360.18560.84111.9332010710421114869214932012167512709505467820.280.250.230.2400.470.88350.23070.80791.959309799391036427714318720695034513790.270.290.220.2200.440.90510.14970.86891.9625031265784593410561310041450.20.230.250.3200.570.880.1870.83571.97330000000000NANANANANANANANANANA0511765091751319345397239455331814374499132345778378122993151381236335767420337088527241445513612797442381967348722274863386435303074214141824568389853092762630653912867547853514152256441185044297429701671309021814814420652079973237303613533638141631231657
GCF_032452875.1NC_083882NC_083882.1Bos javanicus breed banteng chromosome 15; ARS-OSU_banteng_1.0; whole genome shotgun sequence.24621748246039941759680417650305200844730510.290.290.210.2100.420.94420.00190.99811.98026606231283109118571192827583100758597393100397477000.250.280.240.2300.460.91480.15340.86361.976631088510484994335642331275372385346899013862010.260.230.260.2600.520.86560.30560.75271.941807366705815066954916875726258100267354190.250.290.230.2400.460.89460.1910.83671.948801089720516005116007713192913467905867360.280.250.230.2400.470.88340.23240.80461.96260506625521868386665387498018026560.270.290.220.2200.440.90540.1560.86421.96670323163915108611671431045990.20.240.250.3100.560.88020.21390.81421.97360000000000NANANANANANANANANANA011974107973331690577221153089837605962781156036887070683356529172257567115341067584651692241931119161531279889213979715753477970108407266731740807862786073459857622112035863244378758848475164913709480096349573623833813385582987290891514404413411021786313182848892746
GCF_032452875.1NC_083883NC_083883.1Bos javanicus breed banteng chromosome 16; ARS-OSU_banteng_1.0; whole genome shotgun sequence.23388490234378771744499517448770100817202320.290.290.210.2100.430.94490.00120.99881.9846455476931112797961243072188949689226200100418317850.250.270.230.2400.480.92050.09810.90971.975370965314324638288361239588311054312561011515640.260.220.260.2700.520.86370.29980.7581.937707925829886423961633516420573100293740920.240.280.230.2400.470.89410.18020.84411.9443012011923916311216412114544214604606187210.270.250.240.2400.480.88220.23420.80491.95770774967818074578367587578027589860.260.280.230.2300.460.90260.15230.86641.9664027325985999910881337042830.20.230.250.3100.570.88170.20250.82371.97270000000000NANANANANANANANANANA0779110352252949387037111267149428870808064452686366152346048125574578884416296461613140359675815202122306877311350922954771357315228497028936406687561678809391810270836640147794776164203506648579834521463625724309299677687407874315264810483021625942193853562695
GCF_032452875.1NC_083884NC_083884.1Bos javanicus breed banteng chromosome 17; ARS-OSU_banteng_1.0; whole genome shotgun sequence.21078540212086041554643715541235200733750160.290.290.210.2100.420.94450.00320.99681.983140842483294319561039791676545997936128100354206990.250.260.240.2500.490.91950.10280.90541.97397621289271560245324202135285330286930010197190.250.210.260.2800.540.86240.3050.75451.9314276519612735259952271085445389100245448080.230.270.240.2500.50.89330.18840.83811.942156339210519715754415424413259413502705794090.280.250.230.2400.480.88340.23240.80611.9567010785291108971761861780125037294860.270.280.220.2300.450.90610.14510.87241.96650323668950116512991527049410.190.240.260.3100.570.87720.20960.81751.97070000000000NANANANANANANANANANA06497888819893885623410671622834236260691334537429511333473883490145247874550739071196031806533447311043624924093950227170035389437743552209529967355491872535669555758345496005785456722872622865203773396326444775214868086270751810925251517822204970148143002785
GCF_032452875.1NC_083885NC_083885.1Bos javanicus breed banteng chromosome 18; ARS-OSU_banteng_1.0; whole genome shotgun sequence.18008740181983851504636815083965400663378580.270.270.230.2300.450.94830.00650.99351.993981080316138889905975704882422128482991100353722560.240.250.250.2600.510.91950.10860.90071.98092323036265861212433401376613558219545645019138780.230.20.280.2900.570.85930.30950.75171.9293335081784574570346727244875660100203759710.210.250.260.2700.540.88190.2550.79011.9421013214928120072819732118582318500807688800.260.240.250.2500.50.88320.23240.80711.95880654189687088536543542782024206020.250.270.240.2500.480.89590.19580.83731.957603741781073135314831805057140.190.240.260.3200.580.87710.2260.80511.96710000000000NANANANANANANANANANA0123171448736637677114921994012152490212895140706517107271028061747374940889281681511117624424005605212980678519345127583969700736361228799397983835343661075911605106681891362961962314465878287311580611629456313407129636925672147658904383014921134111448717499884989637277411198475074226
GCF_032452875.1NC_083886NC_083886.1Bos javanicus breed banteng chromosome 19; ARS-OSU_banteng_1.0; whole genome shotgun sequence.17559678175657741497158314945583100650427180.270.270.230.2300.460.9420.0010.9991.99547948701664100300641104109791691309496431100397368220.240.250.250.2600.510.91660.11680.89391.9797269405646421206453176386537569980556944019666370.240.20.270.2800.550.86210.30630.75311.9368067054377597661590972661778540263906780.220.260.250.2600.520.8850.22430.81131.9468254017016933918099017609917246917448007040380.260.240.250.2500.50.88280.22330.8121.9642213570232603356484913494470021529710.250.270.240.2500.480.8990.17130.85381.965805245971340166818392254071010.190.240.260.3200.580.87740.21940.80791.96901013027283301180.250.230.240.2800.520.85490.13460.87421.9957012522169213520743311602221341307956221337313753565912580938259256680970789941552511286666925773655913997791322129136094669712641571274910967786686343347986813454111321812973722012315321851996901585013023503112875114657456712547107940323613629119061478918059538882336998747213180424943
GCF_032452875.1NC_083887NC_083887.1Bos javanicus breed banteng chromosome 20; ARS-OSU_banteng_1.0; whole genome shotgun sequence.21088711211508101466180314669786200715713100.290.30.20.200.410.94330.00170.99831.97642382344728555274929537961979596389296100304380080.270.280.220.2300.450.92110.10140.9071.9716015715030714944812298513668414092505500420.280.240.230.2500.480.86660.30070.75711.9383056888046293420415407243000330204363290.270.310.20.2100.410.90230.160.85931.9424068661349192289908762537826003363430.280.250.230.2400.470.88150.22760.80931.95690943803977680656677667742032459020.270.290.220.2200.430.90690.13860.87981.96190181634513571612769024650.210.230.250.3100.560.88880.20510.82041.973601012227313901190.180.230.260.3300.590.86170.21630.80481.9688039465132142726123201480830952814307334902794505031541497237830032839381931943081536516913188312454012939154126481885361029102688216017763304326126413406212639173559167851993267271820982627397823242334122018661760331928523726826194019419823089124426601166
GCF_032452875.1NC_083888NC_083888.1Bos javanicus breed banteng chromosome 21; ARS-OSU_banteng_1.0; whole genome shotgun sequence.198281121991175514988074150142450697421860.280.290.210.2200.430.94590.0030.9971.985946437083485331829490939691389272056160321436290.250.260.240.2500.490.91840.11440.89621.97554861825026151121709918333724969124906608991930.260.210.260.2700.530.86310.30260.7561.9341056044136359828450674247156670211866500.240.280.230.2500.480.89350.18920.83711.944501928327515425115760213087213303105757560.270.250.240.2500.480.87950.23670.80121.96060839147893568618569639586029908700.270.290.220.2300.450.90430.15520.86371.964602520456407498401039032680.190.230.260.3200.580.87560.22070.80961.96720000000000NANANANANANANANANANA05484786917513564539596145510300456396315324368624601284936054383435872245140375210996274959414268955855532093366321825279469838473871199947736252467573493356879667873729555565975206260252705625331334382239366120876032541864879934166417517374252119936622079
GCF_032452875.1NC_083889NC_083889.1Bos javanicus breed banteng chromosome 22; ARS-OSU_banteng_1.0; whole genome shotgun sequence.17192180173142761322961413279034200610153040.280.280.220.2200.430.94530.00540.99461.9876416330746105370411169089884655178819313100395128690.250.260.240.2500.490.92130.10670.90261.97813953429723052723287619837927815627876409881750.250.210.270.2800.550.86230.29870.7591.93606979987791231856255895895287100264132810.230.270.250.2600.510.88940.20630.8251.94640898217112448412216610603210576404584460.270.250.240.2400.480.88420.21790.81551.9636011981631248240851269868505041661770.270.280.220.2300.450.90880.14110.87721.96890211536508610678823026190.190.230.260.3100.570.87850.2170.81311.9686080829212768475952440156920.20.20.290.3100.60.90930.07260.93031.963506316857218743813598110306634430766192696132466568495232703685492944628451572837301242632586535416210740648622913875213163205436415843911918511166845458806738419661733142185573801058352697620258883675383724464188195866476093711710004724450221314522125240132451
GCF_032452875.1NC_083890NC_083890.1Bos javanicus breed banteng chromosome 23; ARS-OSU_banteng_1.0; whole genome shotgun sequence.15036716149524211147549411455251300529201820.280.280.220.2200.430.94530.00370.99631.9871572567113972828017981523594231461549640273616020.250.260.240.2500.490.91410.12930.88351.97761554433436770123526020693727263827129109861260.250.210.260.2800.540.86110.31340.74971.936045543605127271363342237964390171114920.230.280.240.2500.490.88790.23470.80511.947878501229021214119013977712251112735605308340.270.250.230.2400.480.88050.23830.80281.95580575041598316451177458178020827120.260.280.220.2300.450.90140.17960.8471.9634011010121130533546403650730157080.190.230.260.3200.580.88430.23060.80021.96470000000000NANANANANANANANANANA0702590622053428056211001964883776679668623422652250963019383649495223778459994226123143277702242521014465682358420524946289575443204532217653926053505381103517922270153594589271975249295064446175378034732389357420576675658769529404139411217574175117738382069
GCF_032452875.1NC_083891NC_083891.1Bos javanicus breed banteng chromosome 24; ARS-OSU_banteng_1.0; whole genome shotgun sequence.181102011810188113022278129953860622297460.290.290.210.2100.420.94240.00130.99871.980624025549575417348247971580813560278010276256410.270.280.220.2300.450.92280.1020.90621.97812327214414929314165411708514286514600105476050.280.230.240.2600.50.86640.29710.7591.9408051815535792215394644341177650190379760.260.310.210.2200.430.90570.15960.85911.9565087801679990392305812888284803563440.280.240.230.2400.480.88480.22350.81141.96350599033623636445653452931021212530.270.290.220.2200.440.90810.13890.87741.96980142539578625722898028230.20.220.260.3200.570.89020.18960.83231.97350000000000NANANANANANANANANANA038274911130823033151519831082394324633012492460530711836242230542730406132362695568916913220280253113160133024511577348528822507231315593216349829223690201843213759200343203702286420002896379022232223134622291616331331333626659238625581039272194923181430
GCF_032452875.1NC_083892NC_083892.1Bos javanicus breed banteng chromosome 25; ARS-OSU_banteng_1.0; whole genome shotgun sequence.11222975112862371000596510048470100425637470.260.270.240.2400.470.94790.00490.99511.997649245394566977537450699638865165915490271286520.220.240.260.2700.540.91730.11490.89581.97289906367337704256855222883359272350405011894150.230.20.290.2900.580.85890.30.75781.9271049616245647850458622647715650199672650.20.250.270.2800.550.8810.23880.80161.93480807715716512416788915474115994406476980.250.230.260.2600.520.88270.23250.80571.9571026343626651723267323121609938420.240.260.250.2500.50.89830.17560.85021.96310433275937127214571804054700.170.230.270.3300.60.87690.27040.77191.95320000000000NANANANANANANANANANA0675090891828421471731294179502690818789982800668957064298388351865377975165623479158713768847941001336180532438391918777943577245935275170955447797688411963396013507971361424943105467413276088596783426339543388624116699020769892669697138692927064751120345453192
GCF_032452875.1NC_083893NC_083893.1Bos javanicus breed banteng chromosome 26; ARS-OSU_banteng_1.0; whole genome shotgun sequence.14674975147601601103398611014690100514839110.290.290.210.2100.430.93860.00380.99621.985129424954370957417838200555998157891560262830780.260.270.230.2400.470.92180.10190.90651.97697920517037516746413902616933817377706496050.270.220.250.2600.510.86430.30510.75411.9389054726576117476422712644083710202256300.250.290.220.2300.450.89810.17920.84491.9509075581339709393910840288640603614370.270.250.240.2400.480.88450.21830.81581.96490378691403761288607290256013613150.260.290.230.2300.450.89950.16480.85831.95980141832467536597717023170.20.230.260.3100.570.87840.18870.83451.97490000000000NANANANANANANANANANA0448657731498284439166045402227473786447928985484339617812664335132274679354031837095209840473232648735991777306218824353335430042657173637303845331846232372530043262148517744583536222735524630260026821432248817934162382746918462559255711533486118329561561
GCF_032452875.1NC_083894NC_083894.1Bos javanicus breed banteng chromosome 27; ARS-OSU_banteng_1.0; whole genome shotgun sequence.132497321330861694689469518084300455456780.290.290.210.2100.420.94340.00480.99521.9820519740258541606346284440956045380530211480570.260.280.220.2300.460.91920.09960.90871.97783754117992169153276244908039286103514400.280.230.240.2600.50.86680.2940.76221.9391033918243761299256214126488900123641540.270.310.210.2200.430.90350.16130.85861.952407167138101727101818844998420503722490.280.260.230.2300.470.88180.22520.8111.96140770927787903532162537176026281680.280.290.210.2200.430.90780.14760.87051.96510132538536651703870027600.190.240.250.3200.570.87740.21880.81071.9707044819621027230709850.20.210.280.3100.590.88150.13130.8791.97270239830338811641208429842034150920842356161128441996119414941936176824731870178736861099213817823371205990715441033237117751680152511092088210617452309128126662358123029402203186711851884244515501392926134810722156205723545141487154770317977391745792
GCF_032452875.1NC_083895NC_083895.1Bos javanicus breed banteng chromosome 28; ARS-OSU_banteng_1.0; whole genome shotgun sequence.13663612136536491006184610038177200474174840.290.290.210.2100.420.93930.00150.99851.983223232355569927987761235527235954972580255236500.240.260.240.2600.490.91050.11440.89451.9748520615113728813770111583013835414000305318880.270.220.240.2600.510.86560.30110.75841.9423053128645961301394604341262090193464170.260.30.220.2300.440.9020.1680.85331.9563061461077971780509664066786102944930.280.250.230.2400.470.8850.2220.81241.9641027918829395620997821077809939000.270.290.220.2100.440.90440.1560.86571.96470201131448522577709022560.20.230.260.3100.570.87670.21180.8141.97250012712727943174419149520151110.180.210.280.3300.610.87460.14690.86331.963703894482711812301318449003276232132273501232144022982148022972751282439442978258458871725335127135461312014142632152834912890260322651467321131762778370519674229376414504063337929011783291038802189210410991639145135953107398674118101834853267196624081111
GCF_032452875.1NC_083896NC_083896.1Bos javanicus breed banteng chromosome 29; ARS-OSU_banteng_1.0; whole genome shotgun sequence.14361229144191191138308111417115400515809440.280.280.220.2200.440.94110.00350.99651.99034344188527064473768244760838476251137200270821040.240.260.250.2500.510.91550.12330.8891.97332540335327662225759205470294125277865010032190.230.210.280.2800.560.86030.30830.75191.929705140067567174543434274490647100196459860.210.240.270.2800.540.87940.23680.80311.93080797215110773510436610017710354404158220.270.240.240.2500.480.87980.2440.79671.95670573055598933410859417081019999280.260.280.230.2300.460.90070.16130.86141.9610151530427525561678021910.190.240.260.3100.570.87670.23040.80331.9690000000000NANANANANANANANANANA0661676201699398058221003263613345667271202906557348823304355747304974837864983926132373356733641351044667252447388225026441580542484596171150296687607994473878998071834239499580646180266166025430394436842450408416427390582387828734941452418544401101838132294
GCF_032452875.1NC_083897NC_083897.1Bos javanicus breed banteng chromosome X; ARS-OSU_banteng_1.0; whole genome shotgun sequence.4302636943098655293795602930041722001448072010.30.30.20.200.410.93990.00220.99781.9739648696134415052162165177571084640011095585500535124040.260.270.230.2400.470.91480.12260.88961.9747187400456492948368166307365352616365586013937330.270.230.240.2600.50.86570.30570.75441.9443099713941113566570368067196546400353408110.260.30.220.2300.440.89410.19720.83251.9464011513525018452418739314155514454606580180.280.260.220.2400.460.88210.22810.80861.96070745785795461543964543280026284900.270.30.220.2100.430.90370.18820.84361.9575066481141657192221122618083090.20.230.250.3200.570.88390.19960.82611.97220000000000NANANANANANANANANANA011140137823465642585471530888606363814286426910124137431288962187191776410415806167711518951808310845414506808439776769479888387678666059214258769279346696896551561162889513888108228824679747437163944152985887256435853823896476301025316624139403824077699220157872680
GCF_032452875.1NC_083898NC_083898.1Bos javanicus breed banteng chromosome Y; ARS-OSU_banteng_1.0; whole genome shotgun sequence.186051718542211310326132881450063543780.290.290.210.2100.420.93170.00870.99141.9792262753318023364735224973245424011531550.270.280.220.2300.450.91470.13990.87281.96880182038151181255511559136490528810.30.250.210.2400.460.86720.32240.7411.945016265019670410435311226105759680.270.330.180.2100.390.88210.2450.7931.9124064102305212116841896080060.270.250.230.2500.480.87660.27120.77541.956805907258340393364295501997030.250.280.240.2300.470.90090.19360.83621.96660000000000NANANANANANANANANANA0000000000NANANANANANANANANANA04944631852723716503432732112933095692839728722626547731629648421924934657225616535420639825328222623936621922924015729625549489228165245207347177325581512393483363681149185793199925181
NANC_012706NC_012706.1Bos javanicus mitochondrion; complete genome.54584442424021990163390.330.270.260.1300.390.9280.41960.66621.93371211335883269304614970114000.320.290.260.1300.390.88950.49340.6351.907848617155514891252780050760.320.30.230.1500.380.88360.49470.63211.901940000000NANANANANANANANANANA0000000000NANANANANANANANANANA0000000NANANANANANANANANANA063920519911411206300.330.320.180.1800.360.86210.30150.75651.89980000000000NANANANANANANANANANA0258511946112671216243542853926126246132230172321089315765272380712730243332174312192621121632632003902233163819