GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_N Number of 'N' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_N Number of 'N' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_019923935.1	NC_059157	NC_059157.1	Bubalus bubalis isolate 160015118507 breed Murrah chromosome 1; NDDB_SH_1; whole genome shotgun sequence.	60462290	60210852	40870175	40799158	6100	202348575	0.3	0.3	0.2	0.2	0.4	0.9443	0.003	0.9971	1.973	901	875	1776	25307073	27512648	18090115	18623072	2200	89535108	0.27	0.29	0.22	0.23	0.44	0.9186	0.1069	0.9023	1.9726	50776	540	504	1044	455618	386190	426955	435825	1704588	0.28	0.23	0.23	0.25	0.49	0.865	0.3091	0.7518	1.9384	0	17200861	18932996	12157946	12550480	500	60842783	0.27	0.31	0.21	0.22	0	0.42	0.9014	0.1649	0.8556	1.9473	0	283	285	568	210300	205330	169696	171673	756999	0.28	0.25	0.23	0.24	0	0.47	0.8783	0.2446	0.7966	1.9573	49	2072099	2196003	1445753	1463330	200	7177385	0.28	0.3	0.21	0.21	0	0.42	0.9042	0.1576	0.8631	1.959	0	76	67	143	2082	2408	2620	3259	10369	0.2	0.23	0.25	0.31	0.57	0.8819	0.2008	0.8247	1.9733	0	1	5	6	138	154	197	225	714	0.19	0.22	0.28	0.32	0	0.59	0.8757	0.1212	0.8866	1.9721	12572	15021	4339	7897	10147	14588	9814	8328	10145	11345	8611	14952	9879	4343	7602	9030	9169	11566	9881	9431	17616	5332	10180	8820	16909	9517	4900	8644	5969	11535	8745	8615	6873	5586	10422	9506	8374	10679	6278	11982	11179	4712	14757	9972	9923	6211	8239	12470	7937	7282	3524	5070	5500	10427	9339	11972	2739	5536	5832	2764	9493	3740	8193	3433
GCF_019923935.1	NC_059158	NC_059158.1	Bubalus bubalis isolate 160015118507 breed Murrah chromosome 2; NDDB_SH_1; whole genome shotgun sequence.	55087115	55193335	38949031	38931540	3300	188164321	0.29	0.29	0.21	0.21	0.41	0.9461	0.0012	0.9988	1.9785	1268	1231	2499	25717053	28171196	18978216	19651925	1200	92519590	0.26	0.27	0.23	0.24	0.47	0.9167	0.115	0.8954	1.9751	14665	782	712	1494	651378	552263	672883	679984	2556508	0.26	0.22	0.25	0.27	0.52	0.8631	0.3088	0.7522	1.9383	476	17858061	19797057	12934823	13424479	600	64015020	0.25	0.29	0.22	0.23	0	0.45	0.8928	0.1988	0.8311	1.9431	0	332	348	680	224464	219805	190320	191130	825719	0.28	0.25	0.23	0.24	0	0.47	0.8766	0.2559	0.7905	1.9531	221	2166291	2288695	1544783	1576501	0	7576270	0.27	0.29	0.22	0.22	0	0.44	0.9012	0.1671	0.8561	1.9587	0	142	155	297	4302	5036	5623	7019	21980	0.2	0.23	0.26	0.32	0.57	0.8836	0.2255	0.8046	1.9675	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	19069	24636	5817	11186	15207	23778	15595	10835	15759	17560	10969	19291	14247	7024	10709	13120	13226	19185	14737	11834	29618	8732	16362	12268	26284	15403	6964	12631	7450	16559	13745	11813	10572	6991	14951	14865	12878	18574	9342	21068	17420	8229	18895	17145	13733	8174	14191	17016	9919	9983	5593	8427	7117	16691	15331	18941	3475	9548	9535	4323	12960	4437	11132	5201
GCF_019923935.1	NC_059159	NC_059159.1	Bubalus bubalis isolate 160015118507 breed Murrah chromosome 3; NDDB_SH_1; whole genome shotgun sequence.	49915862	50028224	37433110	37490432	4700	174872328	0.29	0.29	0.21	0.21	0.43	0.9487	0.0019	0.9981	1.9852	1445	1407	2852	24794122	27259316	19970423	20623303	2000	92649164	0.25	0.26	0.24	0.25	0.49	0.9178	0.1077	0.9014	1.9792	73488	979	918	1897	740914	627084	852275	846151	3066424	0.25	0.21	0.26	0.27	0.54	0.8628	0.3069	0.753	1.9375	0	16119058	18048111	12822964	13312044	1000	60303177	0.24	0.27	0.24	0.25	0	0.49	0.8905	0.2059	0.8251	1.9496	21839	386	394	780	274087	269508	245759	244443	1033797	0.27	0.24	0.24	0.25	0	0.49	0.877	0.2483	0.7941	1.9577	0	2552234	2727145	1869576	1893693	100	9042748	0.26	0.28	0.22	0.23	0	0.45	0.902	0.16	0.861	1.9643	0	82	79	161	2280	2753	2999	3713	11745	0.19	0.23	0.26	0.32	0.57	0.877	0.2169	0.8117	1.9704	0	0	1	1	26	26	31	36	119	0.22	0.22	0.26	0.3	0	0.56	0.8929	0.0746	0.9306	1.9862	20832	26889	6023	12377	18089	32539	19700	10455	19878	20944	10753	22107	15620	8515	11465	15432	14816	23742	17642	11942	38093	10043	21021	13814	33353	19915	7539	12307	7534	20240	17014	13171	13259	6411	16481	20188	16474	25343	11472	29194	23025	11735	18191	22898	18548	8771	18681	19554	12178	11957	6809	11014	6298	20783	18261	22516	3201	13286	12382	5528	14612	4081	12949	7191
GCF_019923935.1	NC_059160	NC_059160.1	Bubalus bubalis isolate 160015118507 breed Murrah chromosome 4; NDDB_SH_1; whole genome shotgun sequence.	48111470	47953175	34463817	34438010	4900	164971372	0.29	0.29	0.21	0.21	0.42	0.9457	0.002	0.998	1.9803	1085	1072	2157	24055355	26372723	18081458	18729772	1400	87240708	0.26	0.28	0.23	0.23	0.46	0.9191	0.1083	0.901	1.9744	1338	728	716	1444	600412	520934	628668	631353	2381367	0.26	0.22	0.25	0.26	0.51	0.863	0.3072	0.7531	1.9384	17	15977155	17759649	11841649	12312512	400	57891365	0.25	0.29	0.22	0.24	0	0.46	0.8938	0.1947	0.8338	1.9456	0	270	270	540	199450	195317	165474	168577	728818	0.27	0.25	0.24	0.24	0	0.48	0.8769	0.2415	0.7984	1.9574	0	2123097	2264458	1487488	1512992	100	7388135	0.27	0.29	0.22	0.22	0	0.44	0.9032	0.1558	0.8646	1.9604	0	65	63	128	1851	2171	2383	2898	9303	0.2	0.23	0.26	0.31	0.57	0.8809	0.2021	0.8232	1.9729	0	0	4	4	87	102	131	155	475	0.18	0.21	0.28	0.33	0	0.6	0.8747	0.1631	0.8498	1.9646	17349	21346	5415	10634	14072	22531	15053	10536	14504	16041	10198	18122	12869	6355	9673	12491	12700	17975	14152	11655	27974	7846	15824	11317	24517	14294	6589	11278	7295	15467	13274	11355	10187	6420	13458	14278	11967	17363	8894	19885	16531	7513	16861	15959	13007	7804	13423	15656	9854	9398	4995	7666	6408	15554	13574	16923	3043	8903	8379	3841	12149	3921	10445	4952
GCF_019923935.1	NC_059161	NC_059161.1	Bubalus bubalis isolate 160015118507 breed Murrah chromosome 5; NDDB_SH_1; whole genome shotgun sequence.	37665282	37683542	28581721	28565675	3800	132500020	0.28	0.28	0.22	0.22	0.43	0.9464	0.0005	0.9995	1.9863	930	923	1853	18305351	20111949	14908787	15407640	700	68734427	0.24	0.26	0.24	0.25	0.49	0.917	0.1108	0.8994	1.9733	29369	639	628	1267	502032	436817	592655	580343	2111847	0.25	0.21	0.27	0.27	0.54	0.8619	0.3045	0.7547	1.9336	0	13210952	14701821	10526414	10922308	600	49362095	0.23	0.27	0.25	0.26	0	0.5	0.8873	0.206	0.8256	1.9379	0	233	232	465	185177	189263	172054	175525	722019	0.27	0.25	0.24	0.25	0	0.49	0.8776	0.2368	0.8031	1.9571	84	1357513	1456874	996185	1015351	0	4825923	0.26	0.28	0.23	0.23	0	0.46	0.9008	0.1737	0.8512	1.9626	0	49	50	99	1390	1703	1850	2260	7203	0.19	0.24	0.26	0.31	0.57	0.8799	0.2152	0.8154	1.9697	0	0	2	2	840	778	1601	1750	4969	0.19	0.19	0.3	0.32	0	0.63	0.8966	0.0779	0.9252	1.9442	14169	17615	4194	8740	12671	20491	13371	7453	13488	15048	7165	13715	10866	6596	8184	10061	10624	16477	12437	8428	25613	6863	14406	9065	21881	13349	5353	8702	5285	13992	11104	9339	9315	4519	11206	13305	11626	17950	7595	19847	15108	8126	12456	15680	12591	6126	13190	13320	8376	8272	4876	8213	4514	15325	12936	16941	2393	9526	9337	3952	10043	2931	9168	5022
GCF_019923935.1	NC_059162	NC_059162.1	Bubalus bubalis isolate 160015118507 breed Murrah chromosome 6; NDDB_SH_1; whole genome shotgun sequence.	35078061	35039325	25121432	25177782	2300	120418900	0.29	0.29	0.21	0.21	0.42	0.943	0.0017	0.9983	1.9804	968	935	1903	16139506	17683233	12225187	12667234	1100	58716260	0.25	0.27	0.23	0.25	0.48	0.9145	0.1254	0.8873	1.9742	125249	629	566	1195	466538	399418	487685	492933	1846574	0.26	0.22	0.25	0.27	0.51	0.863	0.3105	0.7507	1.9389	0	11581090	12854643	8513345	8832762	800	41782640	0.25	0.29	0.22	0.23	0	0.46	0.8925	0.2044	0.8264	1.9459	0	213	228	441	162304	161817	143274	145872	613267	0.26	0.25	0.24	0.24	0	0.49	0.8783	0.2485	0.7954	1.956	149	919112	966457	693644	713181	0	3292394	0.26	0.29	0.22	0.23	0	0.45	0.9001	0.1822	0.8448	1.9632	0	121	124	245	3216	4168	4749	5764	17897	0.18	0.23	0.27	0.32	0.59	0.8765	0.2428	0.7925	1.9589	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	13440	16802	4101	8411	11046	17913	11648	7675	11777	12566	7718	14349	10347	4516	7900	8886	9786	13388	10842	8652	21393	6421	11909	9066	19762	11274	5200	8600	5420	12561	10124	8722	7641	4738	10625	10896	9337	13425	6768	15335	12796	5936	12768	12338	10079	5975	10671	12443	7640	7402	3570	5685	4587	12230	10987	13432	2415	6776	6498	2898	9520	2905	8192	3836
GCF_019923935.1	NC_059163	NC_059163.1	Bubalus bubalis isolate 160015118507 breed Murrah chromosome 7; NDDB_SH_1; whole genome shotgun sequence.	35197432	35190976	23297872	23309145	1700	116997125	0.3	0.3	0.2	0.2	0.4	0.9431	0.0003	0.9997	1.97	474	420	894	14585507	15874571	10127484	10464726	400	51052688	0.27	0.29	0.21	0.22	0.44	0.9202	0.0984	0.9095	1.9667	20656	286	256	542	254294	210242	228681	239410	932627	0.28	0.23	0.23	0.25	0.48	0.863	0.3106	0.7509	1.935	0	10306505	11299705	7124067	7358134	300	36088711	0.27	0.31	0.2	0.21	0	0.42	0.9004	0.1581	0.861	1.9369	0	154	126	280	114307	112079	86706	88417	401509	0.28	0.26	0.23	0.23	0	0.46	0.8739	0.2553	0.7893	1.9531	0	1350987	1438355	892380	905659	0	4587381	0.28	0.31	0.2	0.21	0	0.41	0.904	0.1468	0.8712	1.9533	0	35	35	70	1021	1172	1275	1598	5066	0.2	0.23	0.25	0.32	0.57	0.8803	0.211	0.8166	1.9726	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	6619	8680	2422	4300	5442	8326	5260	4736	5064	6001	4940	8682	5122	2321	4333	4973	4959	6311	5295	5214	9274	3049	5514	5146	9036	4877	2631	4714	3251	6217	4654	4878	3675	3160	5611	5495	4452	5433	3259	6529	6063	2690	8606	5520	4837	3611	4241	7038	4125	4121	1924	3046	3240	5378	5114	6374	1411	3118	3247	1547	5487	2106	4520	2038
GCF_019923935.1	NC_059164	NC_059164.1	Bubalus bubalis isolate 160015118507 breed Murrah chromosome 8; NDDB_SH_1; whole genome shotgun sequence.	35483365	35540691	24139534	24153198	2000	119318788	0.3	0.3	0.2	0.2	0.4	0.9417	0.0011	0.9989	1.9736	681	560	1241	18642882	20403009	13224711	13657914	900	65929416	0.26	0.28	0.22	0.23	0.45	0.9178	0.1078	0.9016	1.9739	41703	465	316	781	303732	265291	308711	308647	1186381	0.27	0.23	0.24	0.26	0.5	0.8625	0.3041	0.7554	1.938	1	12871138	14240377	9076525	9425407	700	45614147	0.26	0.3	0.21	0.22	0	0.44	0.899	0.1709	0.8519	1.9455	0	174	191	365	154595	150256	118264	121338	544453	0.28	0.26	0.23	0.24	0	0.46	0.8725	0.2592	0.7882	1.9529	0	2090665	2210395	1405891	1427931	0	7134882	0.28	0.31	0.21	0.21	0	0.41	0.9045	0.1519	0.8679	1.9546	0	40	45	85	1266	1395	1511	1977	6149	0.21	0.23	0.25	0.32	0.57	0.8872	0.2046	0.8214	1.9732	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8463	10246	2751	5883	7116	9879	7316	5664	7259	8112	5554	9447	6689	3161	5167	6095	6282	8737	6949	6363	13182	3976	7563	5867	11585	6932	3126	5710	3990	7417	6457	5769	4979	3743	7073	6572	5913	8349	4340	9600	8092	3709	9013	7588	6574	4133	6346	8283	5108	4918	2410	3987	3451	7813	7009	8245	1406	4106	4304	2017	6106	2013	5259	2335
GCF_019923935.1	NC_059165	NC_059165.1	Bubalus bubalis isolate 160015118507 breed Murrah chromosome 9; NDDB_SH_1; whole genome shotgun sequence.	32124006	32072226	23046533	23018549	1400	110262714	0.29	0.29	0.21	0.21	0.42	0.944	0.0014	0.9986	1.9804	919	870	1789	15145368	16588432	11836866	12192933	200	55763799	0.25	0.27	0.24	0.24	0.48	0.9159	0.1244	0.888	1.9756	11353	627	640	1267	463884	409432	560401	541464	1975181	0.25	0.21	0.27	0.28	0.55	0.861	0.3152	0.748	1.9321	0	8968627	10019763	7063267	7320738	200	33372595	0.23	0.26	0.25	0.26	0	0.51	0.8859	0.219	0.8158	1.9429	0	232	191	423	166393	166850	138675	141293	613211	0.27	0.25	0.23	0.24	0	0.47	0.8757	0.2539	0.7898	1.9569	0	2137495	2270831	1476547	1510798	0	7395671	0.27	0.3	0.22	0.22	0	0.43	0.9032	0.1607	0.8608	1.9593	0	50	33	83	1191	1422	1546	1893	6052	0.2	0.23	0.26	0.31	0.57	0.8798	0.2184	0.8112	1.971	0	3	0	3	844	787	1656	1826	5113	0.2	0.2	0.28	0.32	0	0.6	0.8973	0.1042	0.9037	1.9543	14345	16173	4110	8374	11762	18844	12675	6673	12741	13531	6635	12568	10313	5638	7316	9414	9335	16425	11856	8119	24968	6592	14234	8195	20316	12997	5700	8061	5227	12557	11462	8739	8787	4323	10677	12692	11130	16565	7691	19367	14266	8202	10556	15369	11123	5491	11868	11707	7560	7394	4500	8322	3910	13418	11843	15583	2015	8749	8555	3618	9504	2340	7866	4544
GCF_019923935.1	NC_059166	NC_059166.1	Bubalus bubalis isolate 160015118507 breed Murrah chromosome 10; NDDB_SH_1; whole genome shotgun sequence.	31468296	31346168	20891853	20843078	2100	104551495	0.3	0.3	0.2	0.2	0.4	0.944	0.0031	0.9969	1.9705	411	395	806	12388436	13485074	8620039	8921782	800	43416131	0.27	0.29	0.21	0.22	0.44	0.9206	0.0991	0.9088	1.9712	107955	246	225	471	233398	194081	207506	216125	851110	0.29	0.24	0.23	0.25	0.48	0.8653	0.3068	0.7538	1.9386	0	9223834	10184518	6371457	6598847	600	32379256	0.28	0.32	0.19	0.21	0	0.4	0.9036	0.1533	0.8648	1.9437	0	139	126	265	103791	102332	80288	81222	367633	0.28	0.26	0.23	0.23	0	0.46	0.8766	0.2384	0.8006	1.9586	0	990347	1031466	672967	680083	100	3374963	0.28	0.3	0.21	0.21	0	0.41	0.9034	0.1468	0.871	1.9557	54690	26	33	59	863	996	1083	1365	4307	0.2	0.23	0.25	0.32	0.57	0.8823	0.2155	0.8139	1.9697	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	6224	8010	2287	3929	4826	7315	4971	4544	4601	5474	4404	7874	4763	2096	3790	4523	4427	5621	4911	4986	8346	2763	4959	4689	8589	4443	2563	4604	3091	5604	4501	4454	3354	3030	5007	4846	4155	4982	3128	5627	5569	2251	7903	4748	4296	3359	3871	6625	3554	3632	1725	2691	3024	4972	4551	5695	1425	2735	3006	1372	5068	1982	4077	1866
GCF_019923935.1	NC_059167	NC_059167.1	Bubalus bubalis isolate 160015118507 breed Murrah chromosome 11; NDDB_SH_1; whole genome shotgun sequence.	30136328	29895314	21216634	21166256	2400	102416932	0.29	0.29	0.21	0.21	0.41	0.9451	0.0052	0.9948	1.9785	836	718	1554	16293785	17915139	11929360	12404811	1200	58544295	0.26	0.29	0.22	0.23	0.45	0.9178	0.1144	0.896	1.9766	55948	558	456	1014	406938	351327	391045	399695	1549005	0.27	0.23	0.24	0.26	0.49	0.863	0.3166	0.7472	1.9392	0	10740610	12001133	7726298	8060297	400	38528738	0.26	0.31	0.21	0.22	0	0.43	0.896	0.1874	0.8388	1.9463	0	236	202	438	167555	164166	139013	142998	613732	0.27	0.25	0.23	0.24	0	0.48	0.8783	0.2418	0.7982	1.9623	0	1711030	1828848	1241205	1265495	200	6046778	0.27	0.29	0.21	0.22	0	0.44	0.9054	0.1545	0.8653	1.9669	37754	38	52	90	1236	1558	1659	2137	6590	0.19	0.24	0.25	0.32	0.57	0.8823	0.2598	0.7778	1.9643	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	11671	14071	3880	7849	9299	14504	9535	7410	9228	10096	7268	13310	8552	3486	6796	8081	8710	11283	9324	8356	17249	4906	9983	8210	15848	8767	4411	7882	5017	9793	8435	7995	6299	4805	9001	8738	7540	9650	5570	11728	10258	4277	11996	9183	7982	5524	7817	11292	6774	6551	2896	4215	4934	9868	8702	10909	2303	5000	4498	2331	8240	3131	7420	3112
GCF_019923935.1	NC_059168	NC_059168.1	Bubalus bubalis isolate 160015118507 breed Murrah chromosome 12; NDDB_SH_1; whole genome shotgun sequence.	30444071	30432535	22756126	22751677	2000	106386409	0.29	0.29	0.21	0.21	0.43	0.9438	0.0003	0.9997	1.9849	748	657	1405	13953572	15451625	11189966	11643914	700	52239777	0.25	0.27	0.24	0.25	0.49	0.9183	0.1116	0.8985	1.9744	4090	483	429	912	382441	326756	422678	421814	1553689	0.26	0.22	0.26	0.27	0.53	0.8611	0.3039	0.7555	1.934	0	9850005	11073882	7768492	8119661	500	36812540	0.24	0.28	0.24	0.25	0	0.48	0.8911	0.1986	0.8303	1.9403	0	211	185	396	148016	145935	132078	133844	559873	0.27	0.24	0.24	0.25	0	0.49	0.879	0.2512	0.7914	1.9602	0	1472933	1564539	1078336	1105611	0	5221419	0.26	0.28	0.22	0.23	0	0.45	0.9037	0.1488	0.8692	1.9673	0	52	38	90	1257	1542	1669	2093	6561	0.19	0.24	0.25	0.32	0.57	0.8765	0.2342	0.7993	1.9685	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	10552	13400	3327	6490	9254	14908	9548	5907	9451	10548	5927	11693	8149	4443	6246	7567	7868	11480	8979	6872	18157	5000	10183	7490	16344	9374	3986	6777	4243	10181	8147	7168	6550	3796	8501	9867	8289	12021	5656	14154	11070	5996	10315	11336	8858	4934	8864	10018	6174	6313	3562	5950	3863	10448	9123	10916	1834	6785	6698	2997	7999	2474	6545	3629
GCF_019923935.1	NC_059169	NC_059169.1	Bubalus bubalis isolate 160015118507 breed Murrah chromosome 13; NDDB_SH_1; whole genome shotgun sequence.	26668054	26653977	18018568	18020033	3500	89364132	0.3	0.3	0.2	0.2	0.4	0.9428	0.0003	0.9997	1.9728	322	311	633	10751144	11747248	7749549	8067874	2800	38318615	0.26	0.28	0.22	0.23	0.46	0.9203	0.1064	0.9027	1.975	422059	172	173	345	185061	154162	172590	179151	690964	0.28	0.23	0.23	0.25	0.49	0.8664	0.3004	0.7568	1.9375	0	7162936	7939097	5100437	5334915	1000	25538385	0.27	0.31	0.21	0.22	0	0.43	0.9034	0.1642	0.8559	1.9499	0	118	106	224	91251	89738	79844	81726	342559	0.27	0.25	0.24	0.25	0	0.48	0.8816	0.2468	0.7946	1.9578	0	931743	982139	675923	689003	100	3278908	0.27	0.29	0.22	0.23	0	0.44	0.9032	0.1561	0.8657	1.9621	0	29	29	58	868	989	1053	1303	4213	0.21	0.23	0.25	0.31	0.56	0.882	0.2045	0.8209	1.9759	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4551	6397	1622	2912	3812	5978	3815	3547	4009	4152	3515	6208	3847	2046	3047	3887	3567	4818	4140	3894	6883	2191	3861	3729	6713	3802	1767	3487	2346	4556	3666	3565	2853	2230	4116	4078	3433	4438	2699	4923	4502	2147	6296	4407	3537	2740	3559	5241	2975	2925	1641	2621	2197	3864	3814	4404	1012	2547	2755	1174	3587	1542	3227	1417
GCF_019923935.1	NC_059170	NC_059170.1	Bubalus bubalis isolate 160015118507 breed Murrah chromosome 14; NDDB_SH_1; whole genome shotgun sequence.	23641314	23448969	18218043	18169930	1400	83479656	0.28	0.28	0.22	0.22	0.44	0.9479	0.0054	0.9946	1.9881	558	633	1191	11763708	12953736	9477445	9824822	400	44020111	0.25	0.27	0.23	0.24	0.48	0.92	0.1011	0.9071	1.9807	54657	341	377	718	279360	226355	312496	315714	1133925	0.26	0.21	0.26	0.27	0.53	0.8622	0.3155	0.7471	1.9341	0	8102433	9051563	6420575	6672486	200	30247257	0.24	0.28	0.23	0.24	0	0.47	0.8964	0.1835	0.8419	1.9538	0	183	211	394	134714	132028	120919	123234	510895	0.27	0.25	0.24	0.25	0	0.49	0.8751	0.2468	0.7954	1.9559	0	980053	1039186	758145	772394	0	3549778	0.26	0.29	0.22	0.23	0	0.45	0.9037	0.1543	0.8656	1.9665	0	37	37	74	1072	1274	1365	1682	5393	0.2	0.24	0.25	0.31	0.56	0.8778	0.2073	0.8222	1.9718	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	7586	10625	2202	4661	7228	11616	6965	4034	6976	7593	4028	8393	5834	3662	4444	5832	5012	8536	5922	4435	13189	3718	7246	5127	12022	6899	2661	4482	2641	7512	5802	4815	4767	2524	6031	7545	6072	9153	3978	10636	8426	4611	7305	8694	6580	3250	6736	7566	4302	4303	2893	4885	2445	7449	7084	8586	1272	5253	5139	2169	5672	1557	4711	2688
GCF_019923935.1	NC_059171	NC_059171.1	Bubalus bubalis isolate 160015118507 breed Murrah chromosome 15; NDDB_SH_1; whole genome shotgun sequence.	24062595	24044756	16862985	16860578	1400	81832314	0.29	0.29	0.21	0.21	0.41	0.9433	0.0004	0.9996	1.9776	386	399	785	9831685	10715809	7253257	7499829	500	35301080	0.26	0.27	0.23	0.24	0.47	0.9193	0.1043	0.9046	1.9711	3332	219	223	442	185095	156969	193194	199245	734503	0.26	0.22	0.25	0.26	0.51	0.8627	0.2958	0.761	1.9332	0	6397714	7062889	4655330	4821959	500	22938392	0.25	0.29	0.23	0.23	0	0.46	0.8932	0.1868	0.8401	1.9332	0	146	138	284	109476	108155	90836	91023	399490	0.28	0.25	0.24	0.24	0	0.47	0.8786	0.2456	0.7965	1.9586	64	1059587	1118978	769387	782154	0	3730106	0.27	0.29	0.22	0.22	0	0.44	0.9037	0.151	0.8686	1.964	0	24	34	58	870	977	1057	1316	4220	0.21	0.23	0.25	0.31	0.56	0.881	0.2071	0.8203	1.9743	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5057	6392	1726	3041	4470	7060	4547	3145	4215	4881	3125	5642	3683	2230	3072	3649	3499	5670	4175	3631	8450	2377	4435	3461	7856	4043	1928	3403	2098	4777	3745	3462	2980	2094	4187	4425	3814	5192	2660	6160	5241	2807	5372	5229	4057	2497	4033	5017	2840	2845	1647	3091	2140	4684	4197	5099	1012	3211	3027	1347	3573	1420	3133	1658
GCF_019923935.1	NC_059172	NC_059172.1	Bubalus bubalis isolate 160015118507 breed Murrah chromosome 16; NDDB_SH_1; whole genome shotgun sequence.	24835683	24840247	17740889	17697199	1200	85115218	0.29	0.29	0.21	0.21	0.42	0.9455	0.0013	0.9987	1.9797	670	719	1389	10890754	11932303	8278743	8578522	300	39680622	0.25	0.29	0.24	0.23	0.47	0.9128	0.1603	0.858	1.976	6713	492	544	1036	340585	337798	379246	350731	1408360	0.26	0.23	0.26	0.26	0.52	0.8651	0.3058	0.7529	1.9409	0	6969776	7760042	5242508	5485522	100	25457948	0.25	0.29	0.23	0.24	0	0.46	0.8942	0.1918	0.836	1.9488	0	138	131	269	94766	92958	85997	87192	360913	0.27	0.24	0.24	0.25	0	0.49	0.8784	0.249	0.7929	1.9596	0	977284	1032205	713184	731803	0	3454476	0.27	0.29	0.22	0.23	0	0.45	0.9035	0.1581	0.8627	1.9668	0	33	32	65	929	1144	1201	1472	4746	0.2	0.24	0.25	0.31	0.56	0.8796	0.2242	0.8056	1.9734	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	12164	10929	3424	7018	8027	11546	9221	7880	9875	8139	6151	8982	7077	3351	5332	7274	7655	11535	10834	8725	17232	4354	11334	6356	12962	9015	4115	7187	5662	8087	11135	7471	7458	4199	8054	7881	7547	10012	6244	12349	8725	4528	8813	8592	7625	5053	7145	8026	6392	5834	2389	3794	3939	8599	7246	9150	1393	4476	4129	2198	6417	1831	4863	2810
GCF_019923935.1	NC_059173	NC_059173.1	Bubalus bubalis isolate 160015118507 breed Murrah chromosome 17; NDDB_SH_1; whole genome shotgun sequence.	21050397	20933933	15309937	15306898	2200	72603365	0.29	0.29	0.21	0.21	0.42	0.946	0.0029	0.9971	1.9822	481	422	903	9125347	10085272	7354440	7620799	600	34186458	0.25	0.26	0.24	0.25	0.49	0.919	0.105	0.9039	1.9738	62271	292	263	555	241868	199338	276468	277883	995557	0.25	0.21	0.26	0.27	0.54	0.8622	0.3043	0.7552	1.9329	0	6543354	7352696	5199949	5415194	300	24511493	0.23	0.28	0.24	0.25	0	0.49	0.8939	0.1869	0.8391	1.9438	0	148	115	263	103367	100337	93011	93348	390063	0.27	0.25	0.24	0.24	0	0.48	0.8767	0.238	0.8022	1.9569	0	791155	826635	565483	578146	100	2761519	0.27	0.29	0.22	0.23	0	0.45	0.9021	0.1645	0.8582	1.9584	0	41	42	83	1171	1409	1535	1907	6022	0.19	0.23	0.25	0.32	0.57	0.8816	0.2253	0.8054	1.969	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	6502	8872	1968	3850	5989	10460	6017	3383	6122	6734	3512	7313	5103	3201	3824	4825	4548	7670	5491	3915	11656	3083	6437	4435	10874	6053	2331	3979	2319	6745	5346	4297	4243	2197	5227	6619	5350	8333	3500	9154	7366	4406	6078	7461	5534	2809	5882	6392	3677	3937	2467	4392	2129	6548	6091	7260	1099	4907	4863	2107	4844	1490	4251	2668
GCF_019923935.1	NC_059174	NC_059174.1	Bubalus bubalis isolate 160015118507 breed Murrah chromosome 18; NDDB_SH_1; whole genome shotgun sequence.	17900350	18067152	14881879	14939579	2800	65791760	0.27	0.27	0.23	0.23	0.45	0.9488	0.0066	0.9935	1.9937	864	854	1718	9368925	10300963	8507865	8766236	1200	36945189	0.24	0.26	0.25	0.26	0.51	0.9184	0.1115	0.8981	1.9808	159312	625	595	1220	430773	375139	548678	535821	1890411	0.23	0.2	0.28	0.29	0.57	0.8598	0.3101	0.7514	1.9285	4	5139670	5809195	4689447	4891357	600	20530269	0.21	0.25	0.26	0.27	0	0.54	0.882	0.254	0.791	1.9414	0	184	204	388	155108	151917	147759	149032	603816	0.26	0.23	0.25	0.25	0	0.51	0.8772	0.2422	0.7983	1.9599	0	1159728	1230234	878981	887007	100	4156050	0.25	0.27	0.24	0.24	0	0.48	0.8997	0.1769	0.8485	1.9672	0	41	43	84	1184	1448	1590	1923	6145	0.19	0.24	0.26	0.31	0.57	0.878	0.218	0.8108	1.9688	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	12346	14208	3850	7485	11530	19683	12014	5069	12827	13741	6519	10938	9922	6039	7374	9442	8864	16572	11230	6249	23537	5903	12795	6768	18907	12751	3924	7157	3556	12079	10108	7963	8234	4787	10765	11345	10420	18379	6154	19126	14326	8473	8587	15354	11572	4527	13025	12853	6735	6648	4698	8494	4103	14769	13104	14195	1713	9564	9631	3685	7285	2057	7385	4056
GCF_019923935.1	NC_059175	NC_059175.1	Bubalus bubalis isolate 160015118507 breed Murrah chromosome 19; NDDB_SH_1; whole genome shotgun sequence.	21119965	21204978	14627413	14628538	1300	71582194	0.3	0.3	0.2	0.2	0.41	0.943	0.002	0.998	1.9758	260	264	524	8604412	9402529	6165667	6365606	300	30538514	0.27	0.28	0.22	0.23	0.45	0.9184	0.1109	0.8992	1.9716	5277	149	149	298	144418	119116	131996	135987	531517	0.28	0.24	0.23	0.25	0.48	0.8659	0.3021	0.7562	1.9379	0	5534473	6123458	3998063	4142269	200	19798463	0.27	0.31	0.2	0.21	0	0.41	0.9015	0.1615	0.8581	1.9414	0	94	90	184	63850	62623	52530	54182	233185	0.28	0.25	0.23	0.24	0	0.47	0.8776	0.2437	0.7969	1.9588	0	991596	1067935	689405	709725	0	3458661	0.27	0.29	0.21	0.22	0	0.43	0.9052	0.1479	0.8698	1.9667	0	20	22	42	642	680	764	954	3040	0.21	0.22	0.25	0.31	0.57	0.89	0.1728	0.8469	1.9756	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3801	4943	1370	2518	3050	4725	2943	2724	2987	3311	2793	4836	2989	1445	2286	2953	2763	3650	3163	3006	5136	1616	3089	3004	5095	2835	1503	2577	1867	3495	2861	2609	2074	1736	3138	3186	2571	3227	2049	3848	3451	1631	5013	3198	2627	2006	2525	3872	2272	2286	1170	1859	1693	3183	2713	3574	794	1890	1894	925	2969	1202	2593	1107
GCF_019923935.1	NC_059176	NC_059176.1	Bubalus bubalis isolate 160015118507 breed Murrah chromosome 20; NDDB_SH_1; whole genome shotgun sequence.	19902394	19791267	14973849	14941862	1800	69611172	0.29	0.28	0.22	0.21	0.43	0.9462	0.0039	0.9961	1.9857	413	499	912	8794419	9801234	7083117	7372745	700	33052215	0.25	0.27	0.24	0.24	0.48	0.9183	0.1155	0.8956	1.9756	316	267	259	526	215892	182617	247683	246725	892917	0.26	0.21	0.26	0.27	0.53	0.8626	0.3015	0.7568	1.935	0	5680458	6424312	4554063	4766401	400	21425634	0.24	0.28	0.23	0.25	0	0.48	0.8934	0.1876	0.8384	1.9454	0	123	207	330	106316	108857	96829	99456	411458	0.27	0.25	0.23	0.25	0	0.48	0.8749	0.2496	0.7922	1.9577	0	1125465	1213968	806121	828764	0	3974318	0.27	0.3	0.21	0.22	0	0.44	0.9023	0.1627	0.858	1.9607	0	24	23	47	684	796	846	1083	3409	0.2	0.23	0.25	0.32	0.57	0.8786	0.2179	0.8127	1.9709	0	1	0	1	24	31	28	36	119	0.2	0.26	0.24	0.3	0	0.54	0.9153	0.2523	0.776	1.9844	5508	7638	1720	3582	5412	9355	5547	3025	5680	6371	3278	6815	4616	2825	3575	4359	4366	7000	5072	3710	10909	2727	5960	4195	9326	5582	2081	3657	2199	5321	4648	3748	3751	1957	4821	6046	4618	7258	3382	8534	6750	3721	5524	6516	5242	2609	5217	5658	3348	3438	2197	3631	2086	5940	5513	6476	1010	4089	4162	1728	4236	1210	3734	2057
GCF_019923935.1	NC_059177	NC_059177.1	Bubalus bubalis isolate 160015118507 breed Murrah chromosome 21; NDDB_SH_1; whole genome shotgun sequence.	17106407	17233359	13112460	13170981	1100	60624307	0.28	0.28	0.22	0.22	0.43	0.9451	0.0059	0.9941	1.9872	421	372	793	10909313	12142484	8776735	9135589	500	40964621	0.25	0.27	0.24	0.25	0.49	0.9212	0.107	0.902	1.9785	17788	296	229	525	229415	195856	274527	274552	974350	0.25	0.21	0.27	0.28	0.55	0.8622	0.299	0.7589	1.9362	0	7018552	7949476	5651604	5915520	100	26535252	0.23	0.27	0.25	0.26	0	0.51	0.8891	0.2062	0.8251	1.9457	0	101	118	219	85520	83864	77602	77458	324444	0.27	0.24	0.24	0.25	0	0.49	0.8788	0.2452	0.7967	1.9616	0	1049963	1118222	773079	784884	0	3726148	0.27	0.29	0.22	0.23	0	0.45	0.9069	0.144	0.874	1.9688	0	22	24	46	641	770	876	1055	3342	0.19	0.23	0.26	0.32	0.58	0.8773	0.2056	0.822	1.9679	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	6227	8462	1821	3818	5884	10179	6288	3026	6217	6790	3201	6497	4939	3213	3672	4885	4462	8352	5678	3642	12246	3152	6456	4183	10557	6450	2195	3853	2111	6271	5429	4095	4369	1862	5053	6585	5329	8003	3816	9586	7281	4137	5424	7913	5830	2626	6071	5845	3644	3743	2438	4039	1890	6568	6021	6928	962	4622	4337	2051	4397	1202	3916	2387
GCF_019923935.1	NC_059178	NC_059178.1	Bubalus bubalis isolate 160015118507 breed Murrah chromosome 22; NDDB_SH_1; whole genome shotgun sequence.	17998224	18010975	12869078	12891373	1500	61771150	0.29	0.29	0.21	0.21	0.42	0.9473	0.0012	0.9988	1.98	266	280	546	7527262	8290962	5758963	5984681	500	27562368	0.27	0.28	0.22	0.23	0.45	0.9214	0.1048	0.9039	1.9793	3162	146	144	290	138861	114516	139673	142977	536027	0.28	0.23	0.24	0.26	0.5	0.8664	0.2979	0.7586	1.9397	0	5179885	5772152	3882805	4044490	300	18879632	0.27	0.31	0.21	0.22	0	0.43	0.9058	0.1605	0.8584	1.956	0	98	111	209	76573	76673	68316	68590	290152	0.27	0.25	0.24	0.24	0	0.49	0.88	0.2393	0.8003	1.9607	0	520483	551833	389060	402788	0	1864164	0.27	0.28	0.22	0.23	0	0.45	0.9054	0.146	0.8713	1.969	0	24	17	41	607	677	757	924	2965	0.2	0.23	0.26	0.31	0.57	0.8811	0.1911	0.8337	1.9752	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3742	4822	1280	2269	3100	5047	3014	2345	3159	3222	2443	4523	2970	1738	2358	2963	2719	3888	3119	2615	5490	1718	3162	2759	5204	3048	1315	2455	1535	3454	2793	2516	2255	1509	3150	3463	2909	3602	1952	4185	3692	1988	4246	3675	2816	1936	2860	3750	2158	2190	1314	2222	1560	3253	3052	3560	679	2295	2462	1007	2684	946	2299	1391
GCF_019923935.1	NC_059179	NC_059179.1	Bubalus bubalis isolate 160015118507 breed Murrah chromosome 23; NDDB_SH_1; whole genome shotgun sequence.	14891214	14964111	11130856	11107439	1500	52095120	0.29	0.29	0.21	0.21	0.43	0.9385	0.0035	0.9965	1.9845	341	307	648	7868018	8661102	6069177	6304429	500	28903226	0.25	0.27	0.23	0.24	0.47	0.9194	0.1031	0.9051	1.9761	7929	216	178	394	167437	139467	172300	175970	655174	0.27	0.22	0.25	0.26	0.51	0.8636	0.3074	0.7527	1.9373	0	5418809	6047246	4181817	4358934	400	20007206	0.25	0.29	0.22	0.23	0	0.46	0.898	0.1778	0.8459	1.9506	0	109	106	215	78094	77802	69480	71859	297235	0.27	0.25	0.24	0.25	0	0.49	0.8798	0.235	0.8031	1.9632	0	814703	864926	594290	608224	0	2882143	0.26	0.28	0.23	0.23	0	0.46	0.9044	0.1505	0.8676	1.9691	0	15	25	40	569	685	736	910	2900	0.2	0.24	0.25	0.31	0.57	0.8781	0.2187	0.8103	1.9715	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4567	5654	1487	2869	3944	6102	4152	2753	3842	4528	2853	5464	3344	1792	2580	3357	3261	4686	3551	3142	7150	2187	4094	3171	6592	3615	1787	3052	1854	4357	3348	2960	2669	1722	3846	3861	3275	4904	2309	5358	4444	2254	5078	4536	3581	2263	3646	4640	2629	2633	1501	2547	1808	4273	3916	4866	871	2708	2666	1166	3499	1185	2979	1524
GCF_019923935.1	NC_059180	NC_059180.1	Bubalus bubalis isolate 160015118507 breed Murrah chromosome 24; NDDB_SH_1; whole genome shotgun sequence.	11207997	11134414	9928063	9901407	600	42172481	0.27	0.26	0.24	0.23	0.47	0.9492	0.0046	0.9954	1.9974	482	516	998	6532070	7293660	6195736	6406810	300	26428576	0.22	0.25	0.26	0.27	0.53	0.9163	0.1169	0.8939	1.9733	3511	339	353	692	257702	223440	362087	345183	1188412	0.23	0.2	0.29	0.29	0.58	0.8588	0.3027	0.756	1.9263	0	4887813	5550697	4511836	4696978	200	19647524	0.2	0.24	0.27	0.28	0	0.55	0.8806	0.239	0.8015	1.9344	0	107	94	201	64553	63913	62571	62950	253987	0.26	0.24	0.25	0.25	0	0.51	0.8759	0.2478	0.7937	1.9558	0	349152	372370	291209	297402	0	1310133	0.24	0.27	0.24	0.25	0	0.49	0.8981	0.1761	0.8481	1.9641	0	30	60	90	1178	1527	1720	2135	6560	0.18	0.23	0.26	0.33	0.59	0.8806	0.2534	0.7837	1.9588	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	6652	8889	1919	4221	7290	12659	7829	2706	8081	8785	2866	6576	5960	4065	3893	5055	5378	9451	6456	3481	15985	3649	8724	4025	13408	7744	2668	3942	1894	7899	5686	4763	5118	1802	5683	7557	6901	12128	3831	13121	9379	6154	4950	10295	7337	2884	8472	6673	4192	4264	3324	6060	1713	9215	7727	10872	997	7222	7066	2664	4874	1199	4608	3247
GCF_019923935.1	NC_059181	NC_059181.1	Bubalus bubalis isolate 160015118507 breed Murrah chromosome X; NDDB_SH_1; whole genome shotgun sequence.	42693137	42468516	29004178	29017702	8900	143192433	0.3	0.3	0.2	0.2	0.41	0.9423	0.0029	0.9971	1.9739	720	763	1483	16420745	18019150	11734762	11990636	2200	58167493	0.26	0.27	0.23	0.24	0.46	0.9152	0.1205	0.8909	1.9746	161970	452	465	917	359809	300218	344509	354540	1359076	0.27	0.23	0.24	0.26	0.5	0.865	0.3029	0.756	1.9443	0	10342516	11505757	7255657	7417503	1000	36522433	0.26	0.3	0.22	0.23	0	0.44	0.8943	0.1968	0.8328	1.9464	0	183	191	374	120492	120366	98019	100294	439171	0.28	0.25	0.23	0.24	0	0.46	0.8771	0.2525	0.7897	1.9576	58	1746505	1894032	1216884	1237288	0	6094709	0.27	0.3	0.21	0.22	0	0.43	0.9033	0.173	0.8521	1.9613	0	55	100	155	2303	2622	2832	3539	11296	0.2	0.23	0.25	0.31	0.56	0.8869	0.1964	0.8295	1.9739	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	10925	13090	3508	6280	8285	13935	8471	6269	7952	8562	6771	11901	7429	2871	5986	7138	7390	10079	7749	6747	14727	4775	8140	7867	13952	7877	3987	6814	4632	8767	7371	6411	5661	4307	7597	7760	6582	8875	4953	11153	8814	3781	10602	8519	6620	4542	7076	9354	5275	5703	2475	3608	3929	8759	7490	10217	1753	4146	4016	2296	7694	2278	5882	2729
NA	NC_049568	NC_049568.1	Bubalus bubalis mitochondrion; complete genome.	5415	4325	4348	2270	0	16358	0.33	0.26	0.27	0.14	0.4	0.9268	0.4259	0.6604	1.9389	29	9	38	4994	4244	3950	2326	0	15514	0.32	0.29	0.21	0.18	0.39	0.8794	0.3987	0.6867	1.9184	49	6	1	7	1512	1466	1277	821	5076	0.31	0.29	0.24	0.16	0.4	0.8861	0.5235	0.617	1.9049	40	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	14	8	22	487	456	272	301	1516	0.32	0.3	0.18	0.2	0.38	0.87	0.3329	0.7251	1.9202	1	2	0	2	944	583	556	443	2526	0.37	0.23	0.22	0.18	0	0.4	0.9138	0.3543	0.7038	1.941	28	3	42	19	49	14	21	74	30	7	25	32	42	8	10	37	16	19	59	48	33	25	37	20	3	31	100	11	31	49	68	22	23	78	67	23	38	19	32	31	15	4	36	20	10	27	26	1	2	9	4	5	43	24	0	42	0	0	4	3	29	6	37	21