GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_N Number of 'N' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_N Number of 'N' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_001704415.1	NC_030808	NC_030808.1	Capra hircus breed San Clemente chromosome 1; ASM170441v1; whole genome shotgun sequence.	47218014	46952702	31642283	31590251	278	157403528	0.3	0.3	0.2	0.2	0.4	0.9402	0.0036	0.9964	1.9719	457	466	923	17364987	18958949	12250911	12686081	25	61260953	0.27	0.29	0.22	0.22	0.44	0.9226	0.1066	0.9025	1.9707	26065	385	372	757	343905	293915	314943	323619	1276382	0.28	0.23	0.23	0.25	0.48	0.8644	0.3112	0.7505	1.9385	0	12889344	14177324	9042383	9359353	0	45468404	0.27	0.31	0.2	0.21	0	0.42	0.9014	0.1666	0.8543	1.9461	32	60	92	32382	31286	24057	24997	112722	0.28	0.25	0.23	0.24	0	0.47	0.8707	0.2889	0.7706	1.9423	443715	474215	290849	293567	0	1502346	0.28	0.3	0.21	0.21	0	0.42	0.9015	0.1579	0.8631	1.9561	28	23	51	764	868	904	1153	3689	0.21	0.24	0.24	0.31	0.56	0.8842	0.2118	0.8168	1.9738	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	9520	11345	3237	5955	7648	10769	7375	6499	7559	8655	6670	11345	7495	3068	5856	6606	6842	8713	7610	7297	13222	3906	7462	6709	12698	6838	3711	6798	4728	8490	6592	6558	5037	4278	7919	6992	6113	7688	4659	8661	8357	3209	11219	7286	7748	4796	5939	9547	5941	5590	2495	3425	4266	7724	6886	9070	2142	3817	3963	1985	7168	2866	6242	2502
GCF_001704415.1	NC_030809	NC_030809.1	Capra hircus breed San Clemente chromosome 2; ASM170441v1; whole genome shotgun sequence.	40430582	40420299	27832201	27827658	207	136510947	0.3	0.3	0.2	0.2	0.41	0.9461	0.0002	0.9998	1.9753	454	464	918	16278412	17948805	11691994	12122675	56	58041942	0.26	0.28	0.23	0.24	0.47	0.9228	0.0978	0.9098	1.9728	6421	354	393	747	398878	331357	382982	390687	1503904	0.27	0.23	0.24	0.26	0.5	0.8638	0.3091	0.7519	1.9386	0	12343987	13690011	8723788	9037952	56	43795794	0.26	0.3	0.21	0.22	0	0.43	0.8955	0.179	0.8454	1.9408	45	30	75	24149	23026	22109	22159	91443	0.26	0.24	0.24	0.25	0	0.5	0.8732	0.2598	0.7861	1.9504	278351	307139	215645	220866	0	1022001	0.26	0.28	0.23	0.23	0	0.46	0.9025	0.1581	0.8616	1.9676	44	27	71	1029	1179	1325	1599	5132	0.2	0.23	0.26	0.31	0.57	0.8813	0.1869	0.8362	1.9734	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	11544	14760	3617	6626	9192	13046	8795	6759	8618	10373	7190	12115	8941	3885	6630	7881	7567	10810	8607	7326	16569	5119	9019	7706	15344	8458	4420	8034	4640	9729	7608	7198	5800	4623	9282	8366	7598	10029	5625	11286	9949	4314	12476	9363	8111	5031	7532	10605	5892	6202	3106	4588	4760	9474	8558	11394	2443	4987	5268	2421	8252	3255	7187	2982
GCF_001704415.1	NC_030810	NC_030810.1	Capra hircus breed San Clemente chromosome 3; ASM170441v1; whole genome shotgun sequence.	34859830	34886823	25166391	25124866	349	120038259	0.29	0.29	0.21	0.21	0.42	0.9461	0.0012	0.9988	1.981	690	720	1410	14338274	15786953	10906099	11337377	31	52368734	0.25	0.27	0.24	0.24	0.48	0.9183	0.1182	0.8929	1.9749	1630	536	577	1113	445940	382453	465687	470820	1764900	0.26	0.22	0.25	0.26	0.51	0.8633	0.3101	0.7508	1.9395	0	11424433	12707101	8444062	8780811	31	41356438	0.25	0.29	0.22	0.23	0	0.46	0.8929	0.2056	0.8256	1.9457	55	52	107	24019	22885	22729	22136	91769	0.26	0.24	0.25	0.25	0	0.5	0.8643	0.3079	0.7551	1.945	238157	248550	188715	192774	0	868196	0.26	0.29	0.22	0.23	0	0.45	0.9031	0.1703	0.8531	1.9688	77	69	146	1957	2455	2825	3373	10610	0.18	0.23	0.27	0.32	0.58	0.8788	0.2286	0.8035	1.9625	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	12872	16173	3934	7967	10406	16947	11124	7347	10998	12102	7288	13699	9786	4368	7465	8584	9252	12932	10414	8299	20523	6056	11505	8679	18970	10724	5000	8226	5203	11681	9733	8432	7384	4520	10069	10506	8837	12741	6588	14602	12209	5669	12237	11873	9681	5601	10097	11891	7319	6911	3463	5384	4462	11677	10363	12787	2433	6513	6260	2867	9173	2860	7980	3755
GCF_001704415.1	NC_030811	NC_030811.1	Capra hircus breed San Clemente chromosome 4; ASM170441v1; whole genome shotgun sequence.	35847785	35810574	24537520	24537399	1688	120734966	0.3	0.3	0.2	0.2	0.41	0.9461	0.0005	0.9995	1.9746	376	455	831	15813554	17422927	11384706	11792025	167	56413379	0.26	0.28	0.22	0.23	0.46	0.9203	0.1114	0.8985	1.9736	5011	295	370	665	286317	247958	285731	287692	1107698	0.27	0.23	0.24	0.26	0.5	0.8635	0.3057	0.754	1.9387	1	13378540	14825993	9526121	9871561	13	47602228	0.26	0.3	0.21	0.22	0	0.43	0.9008	0.167	0.8546	1.9476	37	38	75	26512	24530	19751	22876	93669	0.27	0.26	0.22	0.25	0	0.47	0.8696	0.3112	0.7555	1.9352	244874	263483	180226	186296	0	874879	0.27	0.3	0.21	0.22	0	0.43	0.9055	0.168	0.857	1.9552	32	33	65	956	1065	1156	1516	4693	0.2	0.23	0.25	0.32	0.57	0.8893	0.2006	0.824	1.9723	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	7823	9719	2577	5135	6546	9411	6781	5326	6764	7432	5264	9117	6154	2992	4819	5845	5736	7987	6603	6038	12173	3608	6946	5671	10967	6329	2924	5383	3886	6966	6097	5419	4671	3535	6572	6276	5580	7599	4321	8759	7662	3423	8667	7102	5933	3984	5794	7751	4783	4552	2304	3749	3279	7067	6420	7407	1339	3780	3996	1846	5753	1929	4905	2223
GCF_001704415.1	NC_030812	NC_030812.1	Capra hircus breed San Clemente chromosome 5; ASM170441v1; whole genome shotgun sequence.	34495902	34619068	24958412	24945665	1541	119020588	0.29	0.29	0.21	0.21	0.42	0.9435	0.002	0.998	1.9811	623	652	1275	14240705	15689524	10931659	11355905	25	52217818	0.25	0.28	0.23	0.24	0.47	0.921	0.1093	0.8999	1.9747	12403	532	542	1074	436491	378955	458275	461449	1735170	0.26	0.22	0.25	0.26	0.51	0.8627	0.3104	0.7505	1.9378	0	10834775	12043928	8110021	8426336	25	39415085	0.25	0.29	0.23	0.24	0	0.46	0.8922	0.2024	0.828	1.9441	43	56	99	29758	28743	29922	29738	118161	0.25	0.23	0.25	0.26	0	0.51	0.865	0.286	0.7717	1.9445	326062	341733	245641	252173	0	1165609	0.25	0.28	0.23	0.24	0	0.47	0.9008	0.1729	0.8528	1.9664	27	30	57	824	949	1071	1287	4131	0.2	0.23	0.26	0.31	0.57	0.8829	0.1897	0.8352	1.9721	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	12584	15528	3972	7900	10302	16776	11014	7622	10553	11739	7455	13190	9219	4662	7044	9287	9215	13034	10456	8416	20529	5705	11466	8185	18006	10378	4760	8146	5350	11332	9637	8184	7494	4643	9563	10510	8669	12577	6678	14617	12189	5550	12007	11826	9434	5642	9721	11182	7171	6954	3748	5561	4570	11165	9752	12056	2157	6552	6047	2791	8934	2784	7598	3642
GCF_001704415.1	NC_030813	NC_030813.1	Capra hircus breed San Clemente chromosome 6; ASM170441v1; whole genome shotgun sequence.	35331763	35341120	23475033	23489299	5160	117642375	0.3	0.3	0.2	0.2	0.4	0.9408	0.0004	0.9996	1.9705	330	305	635	12620069	13778166	8836739	9169782	121	44404877	0.27	0.29	0.21	0.23	0.44	0.924	0.0953	0.9117	1.9655	4862	262	243	505	241418	199773	212389	223586	877166	0.29	0.24	0.23	0.25	0.48	0.8643	0.3082	0.7528	1.9368	0	9934217	10895350	6838928	7083840	71	34752406	0.28	0.32	0.2	0.21	0	0.41	0.902	0.1551	0.8633	1.9396	33	30	63	17852	17139	15375	15610	65976	0.28	0.24	0.23	0.25	0	0.48	0.8676	0.2766	0.7747	1.9451	219330	227204	150666	151908	0	749108	0.28	0.29	0.21	0.22	0	0.43	0.9019	0.1616	0.8598	1.9517	21	22	43	629	713	784	981	3107	0.2	0.23	0.25	0.32	0.57	0.889	0.2071	0.8175	1.9734	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	6350	8277	2333	4078	4948	7891	4982	4602	4673	5511	4778	8373	4838	2042	4219	4829	4638	6051	5085	5023	8741	2840	5096	4860	8494	4557	2525	4502	3180	5695	4512	4608	3490	3048	5229	5282	4125	4894	3146	6077	5799	2308	8233	5100	4463	3481	3875	6657	3901	3832	1811	2845	3118	4990	4645	5901	1334	2736	2801	1348	5248	2009	4221	1785
GCF_001704415.1	NC_030814	NC_030814.1	Capra hircus breed San Clemente chromosome 7; ASM170441v1; whole genome shotgun sequence.	31446541	31407507	22805817	22773565	206	108433636	0.29	0.29	0.21	0.21	0.42	0.9453	0.0013	0.9987	1.9816	651	700	1351	11476140	12740360	9437436	9755573	50	43409559	0.24	0.26	0.25	0.25	0.5	0.9172	0.124	0.8882	1.976	56243	564	600	1164	431796	381473	525605	512933	1851807	0.25	0.2	0.27	0.28	0.55	0.8606	0.3143	0.7488	1.9317	0	8631475	9679087	6888030	7150000	25	32348617	0.23	0.26	0.25	0.26	0	0.51	0.8862	0.2201	0.8149	1.9425	40	52	92	29150	27536	28508	28598	113792	0.26	0.24	0.25	0.26	0	0.5	0.8675	0.2852	0.7707	1.9482	518486	576430	412389	423523	0	1930828	0.26	0.29	0.23	0.23	0	0.45	0.9057	0.1473	0.8722	1.9644	35	30	65	925	1076	1219	1506	4726	0.2	0.23	0.26	0.32	0.58	0.8807	0.2133	0.8145	1.9687	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	13179	15182	3795	7936	11049	18161	11939	6087	11989	12941	6068	11633	9719	5635	6955	8815	8816	15586	11015	7497	23503	6054	12947	7805	19208	12289	4829	7504	4720	11747	10513	8069	8128	3964	10061	12050	10343	15658	7068	18323	13731	7858	9817	14560	10688	5074	11275	10807	7167	6823	4405	8082	3569	12618	11164	14002	1861	8421	8278	3361	8179	2146	7458	4280
GCF_001704415.1	NC_030815	NC_030815.1	Capra hircus breed San Clemente chromosome 8; ASM170441v1; whole genome shotgun sequence.	32945783	33168382	23252693	23304646	1363	112672867	0.29	0.29	0.21	0.21	0.41	0.9436	0.0045	0.9955	1.9781	379	387	766	11983588	13223241	9030094	9373605	90	43610618	0.26	0.28	0.23	0.24	0.46	0.9211	0.1068	0.9023	1.9767	50625	294	321	615	274001	228261	270666	275218	1048146	0.27	0.22	0.24	0.26	0.5	0.8645	0.3055	0.7542	1.9399	0	9216413	10249529	6874053	7124146	65	33464206	0.26	0.3	0.22	0.22	0	0.44	0.9016	0.172	0.8504	1.9555	44	36	80	22931	22037	19039	19957	83964	0.27	0.25	0.23	0.25	0	0.48	0.8635	0.2892	0.7712	1.9426	502548	528076	352578	359287	0	1742489	0.27	0.29	0.21	0.23	0	0.44	0.9028	0.1705	0.8559	1.9603	27	21	48	703	780	893	1092	3468	0.2	0.22	0.26	0.31	0.57	0.8854	0.1915	0.8309	1.9727	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	7737	9515	2426	4737	6268	10004	6406	4514	6263	6777	4867	8942	5960	2530	4577	5527	5549	7824	6018	5045	11559	3374	6634	5593	10845	6254	2861	4986	3153	7102	5692	4998	4400	2891	6134	6424	5260	7035	3896	8468	7409	3126	8183	6692	5471	3532	5442	7563	4379	4515	2041	2992	2928	6848	6052	7468	1297	3619	3376	1652	5561	1792	4549	2171
GCF_001704415.1	NC_030816	NC_030816.1	Capra hircus breed San Clemente chromosome 9; ASM170441v1; whole genome shotgun sequence.	27288121	27396236	18418741	18465238	290	91568626	0.3	0.3	0.2	0.2	0.4	0.9423	0.0032	0.9968	1.9726	251	254	505	9983758	11001799	7057466	7344388	71	35387482	0.27	0.29	0.21	0.22	0.44	0.9243	0.0991	0.9086	1.9716	294	197	207	404	210526	174714	184555	192715	762510	0.29	0.24	0.23	0.25	0.47	0.8658	0.304	0.7555	1.9406	0	8102873	9008495	5652406	5870825	71	28634670	0.28	0.32	0.19	0.21	0	0.4	0.9042	0.1553	0.863	1.9447	23	22	45	13869	14112	13083	12841	53905	0.26	0.25	0.24	0.25	0	0.49	0.8691	0.2833	0.7715	1.946	170295	178939	122958	122421	0	594613	0.27	0.3	0.2	0.23	0	0.43	0.8983	0.1871	0.8424	1.9465	25	17	42	628	705	777	960	3070	0.2	0.23	0.25	0.31	0.57	0.8828	0.1924	0.8325	1.9732	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5609	7223	2057	3570	4316	6556	4395	4128	4115	4941	3968	7235	4372	1892	3439	4087	3976	5060	4450	4433	7440	2365	4426	4172	7782	3949	2281	4146	2743	4983	4003	4042	3026	2646	4484	4432	3718	4332	2862	4960	4940	1948	7135	4118	3905	3020	3336	6024	3278	3342	1542	2288	2753	4357	4052	5029	1255	2254	2530	1263	4545	1810	3834	1700
GCF_001704415.1	NC_030817	NC_030817.1	Capra hircus breed San Clemente chromosome 10; ASM170441v1; whole genome shotgun sequence.	29649916	29357931	21090428	20989010	275	101087560	0.29	0.29	0.21	0.21	0.42	0.946	0.0074	0.9927	1.9797	519	523	1042	13359213	14793340	9898488	10355706	0	48406747	0.26	0.29	0.22	0.23	0.46	0.9203	0.1166	0.8939	1.9755	22288	429	435	864	370704	320129	362797	370228	1423858	0.27	0.23	0.24	0.26	0.5	0.863	0.3163	0.7477	1.9382	0	10250968	11480772	7457560	7804635	0	36993935	0.26	0.3	0.21	0.22	0	0.44	0.8964	0.1882	0.8382	1.9471	40	36	76	28762	28405	22614	23312	103093	0.28	0.25	0.23	0.25	0	0.47	0.8706	0.2706	0.7805	1.9458	291423	301099	215112	219276	0	1026910	0.27	0.3	0.21	0.22	0	0.43	0.9064	0.1649	0.8579	1.9618	30	36	66	915	1129	1240	1564	4848	0.19	0.23	0.25	0.32	0.58	0.8809	0.234	0.7989	1.9653	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	10472	12736	3543	6944	8616	13456	8887	6638	8487	9259	6631	12143	7780	3317	6215	7321	7853	10394	8628	7524	15893	4478	9135	7629	14318	8187	4017	7032	4631	9051	7707	7238	5797	4256	8100	8180	6935	9098	5179	11145	9525	4136	10853	8714	7554	4988	7272	10316	6185	5925	2778	4098	4398	9183	8100	10075	2076	4841	4434	2191	7338	2801	6601	2988
GCF_001704415.1	NC_030818	NC_030818.1	Capra hircus breed San Clemente chromosome 11; ASM170441v1; whole genome shotgun sequence.	30325760	30283360	22824107	22791544	231	106225002	0.29	0.29	0.21	0.21	0.43	0.9448	0.0014	0.9986	1.9856	505	514	1019	11923615	13325928	9715470	10143088	30	45108131	0.24	0.26	0.25	0.25	0.5	0.9205	0.1118	0.8978	1.9729	18994	420	423	843	359223	307735	393576	395375	1455909	0.26	0.22	0.26	0.27	0.53	0.8616	0.3051	0.7545	1.9353	0	9637874	10853950	7621576	7971675	30	36085105	0.24	0.28	0.23	0.25	0	0.48	0.8923	0.1966	0.8319	1.9426	42	47	89	25915	24219	27435	27803	105372	0.25	0.23	0.26	0.26	0	0.52	0.8699	0.2734	0.7774	1.9449	335708	364130	267530	268276	0	1235644	0.25	0.27	0.24	0.24	0	0.48	0.9056	0.1453	0.8722	1.9717	29	28	57	809	950	1065	1298	4122	0.2	0.23	0.26	0.32	0.57	0.8783	0.1987	0.8274	1.9722	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	9819	12722	3110	6039	8628	13828	8904	5600	8958	9962	5638	11004	7470	4216	5935	7179	7163	10833	8592	6569	17232	4492	9703	7051	15112	8761	3698	6354	4069	9566	7690	6729	6203	3653	7795	9331	7657	11026	5351	13164	10637	5583	9644	10454	8360	4672	8176	9630	5849	5810	3392	5495	3668	9439	8611	9970	1774	6357	6188	2748	7270	2418	6379	3383
GCF_001704415.1	NC_030819	NC_030819.1	Capra hircus breed San Clemente chromosome 12; ASM170441v1; whole genome shotgun sequence.	26087922	26095312	17545958	17547546	494	87277232	0.3	0.3	0.2	0.2	0.4	0.9439	0.0002	0.9998	1.9722	192	189	381	8608535	9444678	6130354	6407202	131	30590900	0.26	0.29	0.22	0.23	0.45	0.9239	0.1065	0.9021	1.9729	1577	146	144	290	163206	135928	147075	152573	598782	0.29	0.24	0.23	0.25	0.48	0.8663	0.2995	0.7573	1.9391	0	7063291	7792434	4939663	5162500	125	24958013	0.27	0.32	0.2	0.21	0	0.41	0.9053	0.1584	0.8603	1.9501	17	27	44	9612	9214	7821	7783	34430	0.27	0.25	0.24	0.24	0	0.48	0.8611	0.2971	0.7624	1.9395	307791	321124	216550	222352	0	1067817	0.27	0.3	0.21	0.22	0	0.43	0.9082	0.1438	0.8742	1.9632	22	12	34	483	575	616	781	2455	0.2	0.23	0.25	0.32	0.57	0.8825	0.2256	0.805	1.9696	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4060	5598	1487	2639	3249	5041	3221	3225	3370	3563	3185	5507	3415	1693	2751	3487	3061	4136	3674	3459	5811	1799	3327	3308	5679	3206	1620	3150	2092	3795	3257	3141	2460	2075	3658	3526	3007	3647	2402	4109	3875	1756	5655	3656	3021	2475	2882	4568	2648	2518	1474	2147	2050	3189	3214	3698	941	1986	2296	972	3200	1448	2853	1248
GCF_001704415.1	NC_030820	NC_030820.1	Capra hircus breed San Clemente chromosome 13; ASM170441v1; whole genome shotgun sequence.	23242205	23399059	18171431	18219750	1738	83034183	0.28	0.28	0.22	0.22	0.44	0.9474	0.0047	0.9953	1.989	425	395	820	10157364	11257982	8297572	8630267	0	38343185	0.25	0.27	0.24	0.25	0.49	0.9233	0.0994	0.908	1.9797	23523	358	316	674	261486	212371	294240	298293	1066390	0.26	0.21	0.26	0.27	0.53	0.8627	0.3148	0.7478	1.9347	4	7857572	8775606	6276719	6524973	0	29434870	0.24	0.28	0.23	0.24	0	0.47	0.8971	0.1833	0.8421	1.9554	41	42	83	23308	22254	24117	23548	93227	0.25	0.23	0.25	0.26	0	0.51	0.872	0.2783	0.7758	1.9483	228295	245615	195970	204530	0	874410	0.25	0.28	0.23	0.24	0	0.47	0.9041	0.1519	0.8661	1.9684	12	26	38	532	649	708	875	2764	0.19	0.23	0.26	0.32	0.57	0.8822	0.2128	0.8159	1.9696	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	6963	9897	2055	4326	6817	11081	6530	3773	6544	7264	3709	7880	5480	3506	4140	5474	4737	7975	5512	4205	12455	3504	6930	4898	11293	6464	2516	4271	2486	7174	5366	4489	4445	2295	5728	7004	5727	8599	3738	10043	8014	4312	6672	8232	6199	3062	6410	7069	4002	3960	2744	4684	2271	6992	6774	8112	1158	4919	4909	2058	5252	1448	4424	2600
GCF_001704415.1	NC_030821	NC_030821.1	Capra hircus breed San Clemente chromosome 14; ASM170441v1; whole genome shotgun sequence.	27933508	27916748	19404822	19417442	213	94672733	0.3	0.29	0.2	0.21	0.41	0.9443	0.0006	0.9994	1.9765	269	279	548	9372873	10311897	6944756	7223414	26	33852966	0.25	0.28	0.23	0.24	0.47	0.922	0.1031	0.905	1.9684	3866	217	204	421	184236	155226	184410	190966	714838	0.27	0.23	0.24	0.26	0.51	0.8625	0.3024	0.757	1.9328	0	7392889	8186230	5351710	5554100	1	26484930	0.26	0.3	0.22	0.23	0	0.45	0.8964	0.1807	0.8445	1.9375	23	42	65	22317	22227	18674	19487	82705	0.27	0.24	0.24	0.25	0	0.49	0.8683	0.2947	0.7637	1.9479	441466	468400	327205	336462	0	1573533	0.27	0.3	0.22	0.22	0	0.43	0.9031	0.1624	0.8607	1.9522	22	24	46	671	750	862	1068	3351	0.2	0.22	0.26	0.32	0.58	0.8844	0.1966	0.8276	1.9705	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4996	6292	1711	3043	4436	6394	4284	3244	3996	4849	3190	5744	3682	2088	3022	3651	3468	5292	4035	3710	7794	2381	4187	3463	7435	3889	1905	3431	2176	4827	3544	3489	2874	2220	4214	4124	3658	4912	2572	5594	5047	2457	5553	4900	3964	2517	3783	5090	2887	2857	1606	2833	2207	4517	4078	5000	1078	2868	2825	1238	3682	1485	3159	1624
GCF_001704415.1	NC_030822	NC_030822.1	Capra hircus breed San Clemente chromosome 15; ASM170441v1; whole genome shotgun sequence.	23756431	23814964	17183271	17145965	3926	81904557	0.29	0.29	0.21	0.21	0.42	0.9468	0.0023	0.9977	1.981	468	536	1004	8762930	9686588	6843092	7128279	106	32420995	0.24	0.28	0.24	0.23	0.47	0.9131	0.166	0.8537	1.9752	29884	401	458	859	307142	294997	340039	320396	1262574	0.26	0.22	0.26	0.26	0.52	0.8644	0.3066	0.7528	1.9407	0	6825542	7587074	5137271	5384205	56	24934148	0.25	0.29	0.23	0.24	0	0.46	0.8942	0.1933	0.8349	1.9478	25	28	53	15071	15071	14385	14274	58801	0.25	0.24	0.25	0.25	0	0.5	0.8703	0.2865	0.7674	1.9474	176303	184946	134581	138637	0	634467	0.26	0.28	0.23	0.23	0	0.46	0.899	0.156	0.8627	1.9553	25	21	46	667	805	845	1025	3342	0.2	0.24	0.25	0.31	0.56	0.8778	0.2146	0.8147	1.9728	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	10299	9985	2875	6132	7310	10894	8146	6475	8699	7695	5466	8520	6560	3156	4893	6472	6785	10245	9263	7250	15526	3843	9909	5772	11978	8002	3623	6337	4640	7362	9026	6549	6453	3630	7085	7247	6651	9066	5435	11155	8106	4170	8110	7897	6900	4342	6443	7529	5549	5120	2289	3682	3447	7739	6715	8322	1392	4271	3898	2020	5838	1722	4695	2603
GCF_001704415.1	NC_030823	NC_030823.1	Capra hircus breed San Clemente chromosome 16; ASM170441v1; whole genome shotgun sequence.	22690764	22746181	16945441	16985000	2786	79370172	0.29	0.29	0.21	0.21	0.43	0.9458	0.0024	0.9976	1.9848	356	354	710	9700105	10767352	7740789	8060412	1341	36269999	0.25	0.27	0.24	0.25	0.48	0.9222	0.1009	0.9069	1.9747	21691	303	284	587	276252	230889	296361	300026	1103528	0.26	0.22	0.26	0.27	0.52	0.8638	0.2976	0.7595	1.9383	0	7693936	8611109	5964747	6213913	1341	28485046	0.25	0.28	0.23	0.24	0	0.47	0.8944	0.1832	0.8419	1.9445	32	39	71	20639	19693	21116	20911	82359	0.25	0.23	0.26	0.26	0	0.52	0.8692	0.26	0.7883	1.9523	173490	186562	149642	153754	0	663448	0.24	0.28	0.24	0.24	0	0.48	0.9002	0.1713	0.852	1.9699	15	19	34	490	575	612	781	2458	0.2	0.23	0.25	0.32	0.57	0.8841	0.2114	0.8153	1.9719	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	7585	9799	2427	4699	6823	10829	6879	4070	6737	7773	4298	8258	5924	3383	4660	5251	5607	8143	6007	4438	12746	3453	7212	4983	11731	6552	3005	4962	2850	7381	5399	5055	4747	2761	6107	6581	5808	8230	3758	9678	7917	3747	7406	7413	6193	3524	6278	7784	4302	4570	2490	4007	2882	7471	7013	8366	1556	4492	4550	2077	5728	1882	5235	2555
GCF_001704415.1	NC_030824	NC_030824.1	Capra hircus breed San Clemente chromosome 17; ASM170441v1; whole genome shotgun sequence.	20655637	20606146	14947352	14927425	1225	71137785	0.29	0.29	0.21	0.21	0.42	0.9464	0.0019	0.9981	1.9814	285	259	544	7591891	8468952	6101862	6355995	106	28518806	0.25	0.27	0.23	0.25	0.48	0.924	0.102	0.9057	1.9772	0	220	216	436	202945	167533	220434	223702	814614	0.26	0.21	0.26	0.27	0.52	0.864	0.3075	0.7528	1.9366	0	5906179	6658343	4622966	4830941	50	22018479	0.24	0.29	0.23	0.24	0	0.47	0.8979	0.1805	0.8438	1.9517	30	11	41	19758	19051	17014	17687	73510	0.29	0.24	0.23	0.24	0	0.47	0.8685	0.3367	0.7379	1.9315	223208	236096	157111	160964	0	777379	0.27	0.3	0.21	0.22	0	0.43	0.9021	0.1756	0.8489	1.9512	23	26	49	689	819	919	1127	3554	0.19	0.23	0.26	0.32	0.58	0.8809	0.2102	0.8158	1.9695	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5461	7429	1742	3318	4797	8526	4769	3093	4882	5438	3138	6293	4188	2487	3276	4090	3772	6361	4607	3507	9408	2478	5142	3905	8845	4927	1960	3505	2164	5489	4474	3578	3466	1976	4332	5350	4260	6582	2897	7090	5942	3127	5273	5789	4318	2431	4556	5449	3078	3254	2001	3164	1976	5168	4931	5836	932	3678	3683	1578	4082	1272	3490	2096
GCF_001704415.1	NC_030825	NC_030825.1	Capra hircus breed San Clemente chromosome 18; ASM170441v1; whole genome shotgun sequence.	18215885	18427265	15289850	15341832	1070	67275902	0.27	0.27	0.23	0.23	0.46	0.949	0.0075	0.9926	1.9942	700	661	1361	7357297	8176099	7022987	7277106	57	29833546	0.23	0.25	0.25	0.26	0.52	0.9193	0.1123	0.8976	1.979	72745	587	528	1115	404295	346468	516125	506439	1773327	0.23	0.2	0.29	0.29	0.57	0.8592	0.3092	0.752	1.9287	1	5018742	5675124	4654893	4851917	25	20200701	0.21	0.25	0.26	0.28	0	0.54	0.8819	0.2518	0.7925	1.9414	42	60	102	35577	35169	35858	36546	143150	0.25	0.23	0.26	0.26	0	0.53	0.8743	0.2847	0.7691	1.9488	247972	271490	218457	224892	25	962836	0.25	0.27	0.24	0.25	0	0.48	0.8995	0.1848	0.8414	1.9651	31	28	59	825	995	1123	1366	4309	0.19	0.23	0.26	0.32	0.58	0.8782	0.2135	0.8151	1.9681	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	11516	13532	3440	6992	10710	19123	11292	4432	11630	12824	5954	10404	9506	5762	6886	8736	8047	15864	10363	5528	22561	5432	11935	6291	18113	12018	3666	6449	3186	11375	9167	7260	7751	4223	9891	10819	9825	17056	6021	18529	13608	8230	8256	14654	10592	4046	12096	12035	6177	6224	4589	8224	3703	13838	11958	13101	1547	9270	9113	3391	6929	2013	6841	3963
GCF_001704415.1	NC_030826	NC_030826.1	Capra hircus breed San Clemente chromosome 19; ASM170441v1; whole genome shotgun sequence.	16773615	16808608	14477313	14456658	256	62516450	0.27	0.27	0.23	0.23	0.46	0.9445	0.0018	0.9982	1.996	646	718	1364	8654214	9618965	8035443	8349223	112	34657957	0.23	0.25	0.26	0.26	0.52	0.9186	0.1134	0.8965	1.9802	26659	530	594	1124	426902	365027	539072	528106	1859107	0.24	0.2	0.28	0.28	0.56	0.862	0.306	0.7535	1.9365	0	6470300	7337522	5757233	6025909	56	25591020	0.22	0.26	0.25	0.27	0	0.52	0.8849	0.2255	0.8103	1.9473	70	65	135	32780	30998	35030	34817	133625	0.25	0.23	0.26	0.27	0	0.52	0.8674	0.2846	0.7708	1.9439	200756	214745	194085	200066	0	809652	0.24	0.27	0.24	0.25	0	0.49	0.8944	0.1882	0.8391	1.9655	32	43	75	1061	1282	1411	1749	5503	0.19	0.23	0.26	0.32	0.57	0.8825	0.2125	0.8135	1.9698	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	11620	15822	3202	7016	11050	21013	12373	5252	12675	13062	5259	11876	8911	5642	6412	9159	8474	14703	10697	6287	24455	6050	13144	7586	20896	12726	4306	6610	3919	12135	10456	7382	8259	3085	9120	12808	10352	17046	7066	18996	14657	8179	9052	15137	12362	4754	12129	10739	7124	6730	4592	7587	2945	12877	11226	13867	1695	9125	8445	3550	8307	2009	7726	4732
GCF_001704415.1	NC_030827	NC_030827.1	Capra hircus breed San Clemente chromosome 20; ASM170441v1; whole genome shotgun sequence.	21082596	21170863	14773049	14755850	1897	71784255	0.29	0.29	0.21	0.21	0.41	0.9441	0.0027	0.9973	1.9772	176	174	350	6836995	7525789	5027665	5209333	25	24599807	0.26	0.29	0.22	0.23	0.45	0.9252	0.102	0.9059	1.9709	0	136	140	276	139585	115456	128126	132415	515582	0.28	0.24	0.23	0.25	0.48	0.8658	0.3034	0.7554	1.9389	0	5369940	5956239	3933874	4079851	25	19339929	0.27	0.31	0.2	0.21	0	0.42	0.902	0.1617	0.8578	1.9409	24	18	42	11869	10520	10100	10224	42713	0.27	0.24	0.25	0.25	0	0.49	0.8707	0.269	0.7817	1.9545	132550	139159	102167	104380	0	478256	0.27	0.29	0.22	0.23	0	0.44	0.9079	0.1345	0.8794	1.9704	13	15	28	418	478	499	639	2034	0.2	0.24	0.24	0.32	0.56	0.8881	0.2143	0.8136	1.9724	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3722	4748	1344	2460	3025	4521	2920	2603	2895	3273	2660	4682	2904	1385	2255	2807	2676	3498	3037	2901	5039	1554	2977	2855	5027	2736	1435	2489	1778	3482	2718	2488	2035	1679	3031	3089	2466	3133	1914	3705	3345	1543	4755	3068	2621	1970	2436	3768	2200	2203	1148	1835	1653	3185	2690	3469	770	1803	1849	913	2903	1174	2559	1119
GCF_001704415.1	NC_030828	NC_030828.1	Capra hircus breed San Clemente chromosome 21; ASM170441v1; whole genome shotgun sequence.	19681021	19779745	14969772	14992464	2953	69425955	0.28	0.28	0.22	0.22	0.43	0.9466	0.0033	0.9967	1.9864	357	290	647	7113682	7985907	5865057	6131882	1803	27098331	0.24	0.27	0.24	0.25	0.49	0.9163	0.1234	0.8891	1.973	25596	231	239	470	205174	172237	231830	232502	841743	0.26	0.21	0.26	0.27	0.53	0.8632	0.3032	0.7561	1.9356	0	5328798	6049333	4299029	4505174	40	20182374	0.24	0.28	0.23	0.24	0	0.48	0.8952	0.1855	0.8397	1.9479	93	27	120	27785	29183	26058	27233	110259	0.26	0.25	0.24	0.25	0	0.49	0.8621	0.3066	0.7575	1.9343	235552	258126	184077	190954	0	868709	0.26	0.29	0.22	0.23	0	0.45	0.8982	0.1915	0.8364	1.9469	20	16	36	491	621	668	837	2617	0.19	0.24	0.25	0.32	0.57	0.8753	0.2485	0.7875	1.9662	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5261	7578	1636	3341	5015	9137	5146	2897	5332	5847	3090	6506	4375	2599	3434	4120	4091	6713	4752	3579	10230	2532	5522	4000	9036	5146	2012	3414	2075	4995	4353	3622	3639	1862	4473	5931	4301	6652	3090	8160	6463	3392	5335	5966	4794	2439	4827	5332	3119	3229	2122	3361	1991	5608	4970	5905	974	3758	3960	1577	4003	1188	3525	1934
GCF_001704415.1	NC_030829	NC_030829.1	Capra hircus breed San Clemente chromosome 22; ASM170441v1; whole genome shotgun sequence.	16906638	17084227	13119511	13170444	2246	60283066	0.28	0.28	0.22	0.22	0.44	0.9465	0.0072	0.9929	1.9882	329	257	586	8598264	9644514	7079646	7413247	13	32735684	0.24	0.26	0.24	0.26	0.5	0.9239	0.1052	0.9031	1.9792	7290	265	211	476	209113	178003	246963	247864	881943	0.25	0.21	0.26	0.28	0.54	0.863	0.3024	0.7562	1.9359	0	6682813	7571890	5371648	5635858	13	25262222	0.23	0.27	0.24	0.26	0	0.5	0.89	0.205	0.8258	1.9482	34	28	62	26823	24839	25787	25495	102944	0.25	0.22	0.26	0.26	0	0.52	0.8722	0.2644	0.7817	1.945	244307	257045	184338	187569	0	873259	0.25	0.26	0.24	0.25	0	0.49	0.8976	0.1623	0.86	1.9645	12	9	21	287	345	404	484	1520	0.19	0.23	0.27	0.32	0.58	0.8881	0.2083	0.8211	1.9652	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5652	7704	1704	3431	5369	9336	5661	2812	5501	6179	2962	5910	4487	2865	3279	4333	3994	7559	5186	3349	11049	2802	5919	3774	9797	5710	2020	3512	1998	5665	4892	3773	3929	1756	4590	5977	4861	7042	3426	8593	6627	3651	4984	6933	5254	2385	5401	5360	3237	3360	2171	3634	1731	5957	5398	6318	923	4076	3820	1879	4004	1133	3651	2187
GCF_001704415.1	NC_030830	NC_030830.1	Capra hircus breed San Clemente chromosome 23; ASM170441v1; whole genome shotgun sequence.	13683833	13776351	10692388	10713815	162	48866549	0.28	0.28	0.22	0.22	0.44	0.9494	0.0044	0.9956	1.9889	448	442	890	5617777	6257843	4695951	4913363	7	21484941	0.23	0.26	0.25	0.26	0.51	0.9134	0.1373	0.8767	1.9787	6835	318	310	628	213731	187653	251619	250443	903446	0.25	0.21	0.27	0.28	0.54	0.8625	0.3056	0.7547	1.9377	0	4252836	4801629	3441550	3622979	0	16118994	0.23	0.27	0.24	0.25	0	0.5	0.888	0.2354	0.8046	1.9487	23	19	42	13648	13975	13342	13315	54280	0.25	0.23	0.25	0.27	0	0.52	0.869	0.286	0.7746	1.9364	86585	89796	77890	77533	0	331804	0.24	0.28	0.24	0.24	0	0.48	0.893	0.2143	0.8223	1.9578	92	97	189	2784	3193	3627	4522	14126	0.2	0.23	0.26	0.32	0.58	0.8858	0.2239	0.8053	1.9666	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	6262	8449	1858	3879	5127	9293	5953	3288	6185	6282	2964	5747	4583	2853	3444	4570	4733	7182	5390	3814	11287	2997	6613	3775	9469	6069	2065	3837	2244	5795	5250	3932	4088	1863	4806	5667	4645	7427	3345	8485	6613	3443	5245	6827	4839	2631	5930	5540	3396	3176	2197	3533	1824	6162	5988	6345	863	3925	3932	1615	3745	1067	3603	1909
GCF_001704415.1	NC_030831	NC_030831.1	Capra hircus breed San Clemente chromosome 24; ASM170441v1; whole genome shotgun sequence.	18101550	18076327	13072603	13059518	68	62310066	0.29	0.29	0.21	0.21	0.42	0.9428	0.0012	0.9988	1.9812	177	157	334	5993913	6660252	4703285	4913941	25	22271416	0.26	0.29	0.22	0.23	0.45	0.9264	0.1051	0.9033	1.9784	0	132	126	258	127697	104573	128389	130951	491610	0.27	0.23	0.24	0.26	0.5	0.8659	0.2981	0.7587	1.9398	0	4736985	5319233	3652157	3819987	0	17528362	0.26	0.31	0.21	0.22	0	0.43	0.9058	0.1605	0.8585	1.9566	26	13	39	18872	17783	14101	13885	64641	0.28	0.24	0.23	0.25	0	0.48	0.876	0.2675	0.785	1.9457	111821	113931	85668	87227	25	398672	0.27	0.28	0.22	0.22	0	0.44	0.9038	0.1363	0.878	1.9684	13	12	25	357	418	456	575	1806	0.2	0.23	0.25	0.32	0.57	0.8844	0.2037	0.8221	1.9708	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3419	4465	1158	2068	2821	4652	2757	2103	2870	3004	2221	4224	2723	1689	2095	2739	2399	3631	2828	2405	5203	1485	2896	2498	4817	2820	1198	2232	1429	3102	2592	2266	2087	1407	2883	3216	2667	3292	1835	3920	3412	1828	3926	3380	2573	1747	2476	3413	1993	2031	1241	2048	1387	2941	2762	3253	620	2061	2255	892	2473	860	2112	1285
GCF_001704415.1	NC_030832	NC_030832.1	Capra hircus breed San Clemente chromosome 25; ASM170441v1; whole genome shotgun sequence.	11298718	11389111	10074691	10095639	350	42858509	0.26	0.27	0.24	0.24	0.47	0.9486	0.005	0.995	1.9975	440	390	830	6056229	6764694	5724148	5922766	175	24468012	0.22	0.24	0.27	0.28	0.54	0.9166	0.1188	0.8924	1.9712	584	345	324	669	241127	209943	332607	325408	1109085	0.23	0.2	0.28	0.29	0.58	0.8589	0.3007	0.7575	1.9266	0	4602970	5240521	4221022	4402871	25	18467409	0.21	0.25	0.27	0.28	0	0.55	0.8814	0.2387	0.8014	1.9358	32	29	61	16341	16162	19236	18968	70707	0.23	0.22	0.27	0.28	0	0.55	0.8721	0.2707	0.7784	1.9467	74228	77455	71081	71961	0	294725	0.22	0.25	0.26	0.27	0	0.53	0.8903	0.1869	0.8383	1.964	46	25	71	910	1186	1347	1727	5170	0.18	0.23	0.26	0.33	0.59	0.8836	0.2651	0.7738	1.9541	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	6346	8491	1773	4073	6676	12025	7458	2608	7583	8391	2755	6397	5380	3941	3711	4773	5075	8951	6168	3422	14768	3470	8051	3916	12336	7355	2291	3711	1847	7502	5444	4254	4849	1685	5194	7258	6339	10939	3723	12408	9075	5746	4774	9818	6943	2658	7913	6333	3974	3709	3121	5749	1632	8308	7227	8431	917	6678	6255	2417	4390	1122	4292	2967
GCF_001704415.1	NC_030833	NC_030833.1	Capra hircus breed San Clemente chromosome 26; ASM170441v1; whole genome shotgun sequence.	14700219	14638877	11038057	11044175	225	51421553	0.29	0.28	0.21	0.21	0.43	0.9491	0.0024	0.9976	1.9856	193	224	417	6341308	7061553	4991924	5219947	76	23614808	0.25	0.28	0.23	0.24	0.47	0.9231	0.1017	0.9059	1.9728	1170	163	192	355	158409	131852	161159	164702	616122	0.27	0.22	0.25	0.26	0.51	0.8645	0.3049	0.7543	1.9389	0	5250697	5883272	4059254	4243680	76	19436979	0.25	0.29	0.22	0.23	0	0.45	0.8979	0.1796	0.8446	1.9502	16	12	28	8768	8917	10351	10444	38480	0.25	0.24	0.25	0.27	0	0.51	0.868	0.27	0.7797	1.9482	73095	78774	56607	58838	0	267314	0.24	0.27	0.24	0.25	0	0.49	0.9003	0.1576	0.8604	1.9599	12	7	19	272	323	350	428	1373	0.2	0.24	0.25	0.31	0.56	0.876	0.218	0.8109	1.9724	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4237	5509	1428	2686	3697	5757	3774	2576	3682	4116	2744	5204	3201	1625	2488	3179	3045	4472	3393	3035	6851	1919	3886	3066	6208	3412	1705	2942	1769	4136	3207	2823	2497	1639	3473	3674	3130	4430	2265	4997	4196	2155	4857	4278	3338	2125	3322	4419	2420	2477	1408	2377	1745	3967	3527	4377	812	2430	2434	1069	3241	1111	2793	1509
GCF_001704415.1	NC_030834	NC_030834.1	Capra hircus breed San Clemente chromosome 27; ASM170441v1; whole genome shotgun sequence.	13022257	12975646	9375880	9335188	63	44709034	0.29	0.29	0.21	0.21	0.42	0.9475	0.004	0.996	1.9807	128	130	258	4279615	4716457	3286079	3413757	3	15695911	0.26	0.28	0.22	0.24	0.46	0.9231	0.0995	0.9084	1.9771	3592	96	101	197	85234	70941	85477	87319	328971	0.28	0.23	0.24	0.26	0.5	0.8669	0.298	0.7598	1.9406	0	2822552	3149671	2146828	2237508	1	10356560	0.26	0.31	0.21	0.22	0	0.43	0.9035	0.1631	0.8573	1.9516	14	15	29	8825	8483	7249	7521	32078	0.27	0.24	0.24	0.25	0	0.49	0.8755	0.2664	0.781	1.9632	102204	110366	76715	78125	0	367410	0.27	0.29	0.22	0.22	0	0.44	0.9088	0.1467	0.8707	1.9715	13	14	27	370	445	520	618	1953	0.19	0.23	0.27	0.32	0.58	0.8761	0.1916	0.8329	1.9654	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2167	2866	779	1543	1863	2913	1894	1362	1982	2180	1527	2731	1803	1074	1413	1791	1690	2325	1795	1610	3450	1023	2063	1700	3186	1897	822	1467	950	2236	1691	1537	1363	971	1901	1973	1666	2227	1252	2595	2230	1179	2723	2148	1727	1131	1745	2334	1486	1312	876	1308	977	2023	1945	2182	436	1342	1444	653	1635	645	1550	773
GCF_001704415.1	NC_030835	NC_030835.1	Capra hircus breed San Clemente chromosome 28; ASM170441v1; whole genome shotgun sequence.	12868837	12866473	9470151	9466841	0	44672302	0.29	0.29	0.21	0.21	0.42	0.9473	0.0003	0.9997	1.9832	164	162	326	5992823	6704731	4570407	4804471	0	22072432	0.25	0.28	0.23	0.24	0.47	0.9249	0.1005	0.9067	1.9788	0	131	125	256	127239	106199	129277	131514	494229	0.27	0.22	0.25	0.27	0.51	0.8649	0.3001	0.7597	1.9407	0	4818086	5411295	3599127	3784854	0	17613362	0.26	0.3	0.22	0.23	0	0.45	0.9019	0.1691	0.8524	1.956	20	14	34	12178	12165	11757	12033	48133	0.25	0.24	0.26	0.26	0	0.51	0.8791	0.2375	0.8025	1.9584	110289	122094	89544	91597	0	413524	0.26	0.28	0.22	0.23	0	0.46	0.9094	0.1684	0.853	1.9728	11	15	26	358	419	501	612	1890	0.19	0.22	0.26	0.32	0.59	0.8784	0.1876	0.8356	1.9639	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3506	4566	1076	2098	3000	4540	3061	2072	2989	3387	2098	3986	2774	1378	2072	2533	2555	3610	2734	2314	5561	1577	3169	2481	5177	2889	1292	2389	1387	3262	2612	2309	2082	1328	2918	3006	2540	3481	1795	4060	3558	1419	3746	3229	2735	1613	2747	3642	2039	1871	1067	1698	1319	3231	2860	3757	694	1765	1741	828	2449	921	2325	1042
GCF_001704415.1	NC_030836	NC_030836.1	Capra hircus breed San Clemente chromosome 29; ASM170441v1; whole genome shotgun sequence.	14231148	14346309	11358186	11396705	348	51332696	0.28	0.28	0.22	0.22	0.44	0.9426	0.0057	0.9943	1.9907	349	343	692	5916428	6504465	5240349	5392842	157	23054241	0.23	0.25	0.26	0.26	0.52	0.9162	0.1236	0.8887	1.9711	3444	305	288	593	203848	185255	269126	256662	914891	0.23	0.21	0.28	0.28	0.56	0.8602	0.3058	0.7534	1.9304	0	4963400	5482987	4179723	4319808	25	18945943	0.21	0.24	0.27	0.28	0	0.54	0.8793	0.2372	0.8028	1.9305	19	26	45	17682	16320	17827	17685	69514	0.25	0.23	0.25	0.27	0	0.52	0.8708	0.2765	0.7773	1.9438	112700	125531	106581	109936	0	454748	0.24	0.26	0.24	0.26	0	0.5	0.8987	0.1852	0.8399	1.9629	13	13	26	372	447	476	598	1893	0.2	0.24	0.25	0.32	0.57	0.8804	0.217	0.8166	1.9667	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5778	7052	1579	3571	5341	9221	5912	2900	5940	6593	2566	5051	4447	3082	3130	4317	4468	7509	5804	3441	12138	3150	6629	3768	9299	6231	2219	3448	2174	5927	5168	3858	4188	1537	4601	6283	5337	8710	3535	9435	6779	4057	4414	7680	5714	2381	6275	4891	3491	3319	2299	3976	1436	7033	5225	7025	778	4583	4431	1765	4089	958	3446	2072
NA	NC_005044	NC_005044.2	Capra hircus isolate V07-146 mitochondrion; complete genome.	5585	4546	4333	2179	0	16643	0.34	0.27	0.26	0.13	0.39	0.9268	0.4333	0.6584	1.9295	28	9	37	4917	4271	3761	2106	0	15055	0.33	0.3	0.2	0.17	0.37	0.8788	0.3765	0.7071	1.9062	48	6	1	7	1561	1509	1239	764	5073	0.32	0.3	0.24	0.14	0.38	0.8753	0.521	0.6215	1.8935	40	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	14	8	22	505	471	250	287	1513	0.33	0.31	0.17	0.19	0.35	0.8731	0.2935	0.757	1.9075	2	2	791	513	466	372	2142	0.36	0.23	0.23	0.18	0	0.4	0.9127	0.3508	0.7055	1.9441	28	4	50	24	52	15	19	88	17	4	21	31	44	5	8	41	25	9	51	57	12	24	38	17	2	31	108	7	33	54	61	26	14	82	69	28	33	26	30	32	16	5	34	20	9	29	22	1	2	13	4	3	54	23	0	37	0	2	0	3	30	6	40	18