GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	fr_chromo_N Frequency of 'N' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_N Number of 'N' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_N Number of 'N' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_019393635.1	NC_057861	NC_057861.1	Dromiciops gliroides isolate mDroGli1 chromosome 1; mDroGli1.pri; whole genome shotgun sequence.	233826863	234011175	148106071	148061078	6291	764011478	0.31	0.31	0.19	0.19	0	0.39	0.9431	0.0005	0.9995	1.9633	2499	2431	4930	90584349	96352683	60804617	62034524	431	309776604	0.28	0.28	0.22	0.22	0.44	0.918	0.1065	0.9035	1.9713	283983	1985	1924	3909	1751983	1477725	1584755	1630635	0	6445098	0.28	0.24	0.23	0.25	0.49	0.8653	0.3049	0.7546	1.9456	0	63099061	67457944	42078309	42930339	231	215565884	0.27	0.3	0.21	0.22	0.43	0.8971	0.1874	0.8405	1.9497	0	259	286	545	62693	55970	44773	47557	210993	0.3	0.25	0.21	0.23	0.44	0.8686	0.2911	0.7651	1.9438	1449909	1508906	955930	970270	4885015	0.29	0.3	0.2	0.21	0.41	0.9038	0.1529	0.8671	1.9569	31	44	75	1105	1266	1391	1775	5537	0.2	0.23	0.25	0.32	0.57	0.8823	0.2312	0.8009	1.9684	1	0	1	24	28	30	37	119	0.2	0.24	0.25	0.31	0	0.56	0.9153	0.1814	0.834	1.9822	51373	61050	18381	30690	36617	58858	38764	32328	37545	41961	35306	57796	36704	11041	28892	34506	34956	45598	38265	34289	65283	20975	39464	36555	65369	35555	20932	34538	23341	44152	36838	34874	26161	21327	39616	35654	29975	41365	23766	45496	40852	12970	53780	36461	30300	23283	33119	47860	27777	30392	10500	12768	20729	42175	35734	45852	10430	18157	15989	8924	37920	12812	30123	12895
GCF_019393635.1	NC_057862	NC_057862.1	Dromiciops gliroides isolate mDroGli1 chromosome 2; mDroGli1.pri; whole genome shotgun sequence.	212584146	212947267	137856395	138037748	157361	701582917	0.3	0.3	0.2	0.2	0	0.39	0.9437	0.0015	0.9985	1.9668	2754	2630	5384	89562128	95374166	60670319	61957354	700	307564667	0.28	0.29	0.21	0.22	0.43	0.9191	0.1047	0.9049	1.9722	105053	2252	2154	4406	1924827	1629352	1698470	1755145	0	7007794	0.28	0.24	0.23	0.25	0.48	0.865	0.3134	0.749	1.9456	43	64167645	68716877	43080186	43976353	600	219941661	0.28	0.31	0.2	0.21	0.42	0.8988	0.1791	0.846	1.9512	0	284	253	537	80829	75989	61756	63285	281859	0.3	0.26	0.21	0.23	0.45	0.8709	0.2715	0.7768	1.9516	1413829	1462471	929258	933363	4738921	0.28	0.3	0.21	0.21	0.42	0.9052	0.1631	0.8599	1.9572	35	34	69	912	1194	1306	1713	5125	0.18	0.24	0.25	0.33	0.58	0.8802	0.2921	0.7532	1.9562	1	0	1	22	28	30	39	119	0.18	0.24	0.25	0.33	0	0.58	0.8929	0.2504	0.7775	1.97	57210	66615	20579	34821	40330	63177	42286	36040	40963	45619	39162	64821	40678	11228	31524	38310	39078	49038	41203	37661	70084	23407	42741	41972	68655	37598	23863	39474	26167	47251	40027	38975	28320	24147	43283	38643	32031	43129	25676	46794	43733	12712	59928	37770	33318	25984	34213	52607	30619	32728	10938	12543	23019	45597	39049	49898	11369	18494	15691	9196	41737	14105	32986	13609
GCF_019393635.1	NC_057863	NC_057863.1	Dromiciops gliroides isolate mDroGli1 chromosome 3; mDroGli1.pri; whole genome shotgun sequence.	205652374	205441129	129301827	129317026	1063544	670775900	0.31	0.31	0.19	0.19	0	0.39	0.9417	0.0006	0.9994	1.9615	2410	2563	4973	79026287	83663013	52490574	53461472	1132	268642478	0.27	0.28	0.22	0.23	0.45	0.9144	0.1198	0.8929	1.969	373753	1970	2072	4042	1696041	1463180	1542510	1567449	0	6269180	0.28	0.23	0.24	0.25	0.49	0.8636	0.3121	0.7498	1.9413	0	54284106	57705402	35717950	36400605	823	184108886	0.27	0.3	0.21	0.22	0.43	0.8945	0.1922	0.8373	1.9441	0	239	295	534	59751	54954	44818	47924	207447	0.29	0.25	0.22	0.24	0.45	0.8696	0.2789	0.7723	1.9488	1571273	1637577	997797	998538	5205185	0.29	0.3	0.21	0.21	0.42	0.9017	0.1638	0.8607	1.953	11	9	20	288	363	372	472	1495	0.19	0.24	0.25	0.32	0.57	0.8776	0.2424	0.7902	1.9699	0	1	1	27	27	30	35	119	0.23	0.23	0.25	0.29	0	0.55	0.8682	0.0769	0.9286	1.9915	52354	56227	18805	29628	34232	55922	37347	32333	38014	39964	36581	55158	36576	10217	27202	34446	33841	46130	39640	33750	64614	20449	38905	32920	60700	34307	20832	35162	23226	41733	38688	35534	26418	23209	38483	32698	29745	41325	22688	44592	38164	12441	51654	35039	29568	22224	32303	48859	26858	28971	9516	11700	21347	40939	34714	43592	10056	17110	15292	8466	34918	12290	28310	11555
GCF_019393635.1	NC_057864	NC_057864.1	Dromiciops gliroides isolate mDroGli1 chromosome 4; mDroGli1.pri; whole genome shotgun sequence.	150341652	150439957	98094038	98109339	11658	496996644	0.3	0.3	0.2	0.2	0	0.39	0.9439	0.0004	0.9996	1.9678	2305	2247	4552	62877285	67035088	43574909	44432101	4102	217923485	0.27	0.28	0.22	0.23	0.45	0.9169	0.1128	0.8984	1.9733	122295	1808	1801	3609	1550780	1329402	1464180	1493642	1	5838005	0.27	0.23	0.24	0.26	0.5	0.8645	0.3113	0.7501	1.9462	389	44465528	47747769	30549220	31136514	4001	153903032	0.27	0.3	0.21	0.22	0.44	0.8944	0.2034	0.8286	1.9516	0	235	220	455	51235	46106	37378	39771	174490	0.3	0.25	0.21	0.24	0.45	0.8707	0.2726	0.7767	1.9504	825164	846972	552600	557662	2782398	0.29	0.3	0.2	0.21	0.41	0.9031	0.1582	0.8627	1.9591	104	82	186	2427	3177	3668	4530	13802	0.18	0.23	0.27	0.33	0.59	0.8805	0.2623	0.7753	1.9557	2	1	3	86	84	105	116	391	0.22	0.21	0.27	0.3	0	0.57	0.8868	0.1177	0.89	1.9769	45630	54851	15441	28127	32481	54420	36875	27571	35650	40105	29161	50124	33132	10120	25305	30543	32320	40836	34216	29396	60866	20457	38087	32218	60088	33866	19878	31563	20416	39521	33741	30694	24608	18038	35073	32472	26968	39867	21079	42255	37770	11616	45091	33913	30074	20557	31511	41756	25434	25974	9558	11411	17020	38845	33416	42452	9302	16532	14237	8111	33932	10706	27523	11742
GCF_019393635.1	NC_057865	NC_057865.1	Dromiciops gliroides isolate mDroGli1 chromosome 5; mDroGli1.pri; whole genome shotgun sequence.	91978615	91870459	59715690	59776085	8442	303349291	0.3	0.3	0.2	0.2	0	0.39	0.9434	0.0011	0.9989	1.9673	1126	1144	2270	40745272	43384862	27604047	28126355	400	139860936	0.28	0.28	0.22	0.22	0.44	0.9188	0.1088	0.9017	1.9725	80801	915	958	1873	806940	691216	724113	745890	0	2968159	0.28	0.24	0.23	0.25	0.48	0.8651	0.3105	0.7508	1.9443	0	28367332	30405160	19146159	19506578	400	97425629	0.27	0.3	0.21	0.22	0.43	0.8976	0.1829	0.8437	1.9503	7143	97	107	204	27836	24639	21499	22839	96813	0.3	0.25	0.21	0.24	0.45	0.8697	0.2945	0.7614	1.9496	529216	553281	359815	362243	1804555	0.28	0.3	0.2	0.21	0.42	0.9028	0.1715	0.8544	1.9555	27	6	33	499	546	591	781	2417	0.21	0.23	0.24	0.32	0.57	0.8781	0.2185	0.8137	1.9704	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	24045	28184	8322	14515	16820	26814	18143	15908	17218	18628	16473	26834	16660	5301	13014	16456	16647	20854	17928	17081	30310	10148	18131	17209	29049	16602	9710	16648	11487	19805	17331	16017	12424	9887	17996	16549	13323	18575	11459	21274	18520	5813	25288	16642	13801	11002	15036	21695	12875	13339	4962	5878	9626	18326	15842	20064	4556	8011	7066	4158	17434	5626	13219	6023
GCF_019393635.1	NC_057866	NC_057866.1	Dromiciops gliroides isolate mDroGli1 chromosome 6; mDroGli1.pri; whole genome shotgun sequence.	85708856	85705715	54602564	54557426	5846	280580407	0.31	0.31	0.19	0.19	0	0.39	0.9434	0.0004	0.9996	1.9642	1024	1116	2140	31643219	33724019	21735513	22083418	4886	109191055	0.27	0.28	0.22	0.23	0.45	0.9145	0.1242	0.8885	1.969	2047	813	938	1751	710525	634212	670922	666591	0	2682250	0.28	0.23	0.24	0.25	0.49	0.8651	0.3107	0.7508	1.9418	0	22932542	24529160	15552039	15783367	200	78797308	0.26	0.29	0.22	0.23	0.45	0.8938	0.1889	0.8396	1.9451	422600	113	82	195	20266	18760	15802	16370	71198	0.3	0.25	0.22	0.23	0.45	0.8715	0.2828	0.7695	1.9458	629257	649241	380196	386838	2045532	0.29	0.3	0.2	0.22	0.42	0.9027	0.1655	0.8574	1.9542	27	24	51	740	893	902	1215	3750	0.2	0.24	0.24	0.32	0.56	0.8787	0.2685	0.7677	1.9688	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	21836	24474	7209	13315	14617	23365	16275	14814	16257	16875	14169	22375	14492	4870	11673	13826	15300	19252	17235	15984	27641	8251	17927	15185	24868	15699	8818	14939	10635	16942	16720	14982	11555	9161	16322	15144	12594	18112	10213	19704	16275	5745	22097	15311	13049	10102	13937	18070	12333	12160	4364	5752	8685	16853	13935	19023	3902	7681	6863	3606	15043	4811	11645	5246
GCF_019393635.1	NC_057867	NC_057867.1	Dromiciops gliroides isolate mDroGli1 chromosome X; mDroGli1.pri; whole genome shotgun sequence.	24284814	24256201	17491937	17450994	1676384	85160330	0.29	0.28	0.21	0.2	0.02	0.41	0.9435	0.0018	0.9982	1.9699	388	366	754	8206147	8859931	6428198	6491555	1285	29987116	0.26	0.27	0.23	0.24	0.47	0.9152	0.1285	0.8858	1.9771	18302	314	287	601	268903	224359	261320	262130	0	1016712	0.27	0.22	0.25	0.26	0.51	0.8656	0.3121	0.7502	1.9471	0	5641447	6149320	4391263	4424821	1090	20607941	0.25	0.29	0.23	0.24	0.47	0.8911	0.2191	0.8178	1.9553	0	55	68	123	53406	45788	36370	40773	176337	0.29	0.24	0.22	0.25	0.47	0.8634	0.3245	0.7387	1.9425	564572	613021	405774	425430	2008797	0.26	0.3	0.21	0.22	0.43	0.8939	0.2515	0.7914	1.9549	4	6	10	136	185	188	227	736	0.19	0.25	0.25	0.31	0.56	0.8732	0.2887	0.7592	1.9633	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	7912	9786	2494	4644	5830	9991	6289	4651	6251	6438	5008	9286	5456	1804	4321	5454	5420	7137	6143	5019	10650	3275	6480	5857	10642	6032	3045	5070	3529	6418	5873	4982	4172	2791	5608	6009	4704	7206	3824	8346	6958	2501	8094	6637	4943	3267	5551	6902	4218	4421	1909	2163	2781	6645	5593	7928	1284	3075	3029	1675	5874	1569	4463	2161