GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	fr_chromo_N Frequency of 'N' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_N Number of 'N' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_N Number of 'N' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	fr_tRNA_N Frequency of 'N' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_024166365.1	NC_064819	NC_064819.1	Elephas maximus indicus isolate mEleMax1 chromosome 1; mEleMax1 primary haplotype; whole genome shotgun sequence.	72867073	73041364	48649217	49267941	426	243826021	0.3	0.3	0.2	0.2	0	0.4	0.9447	0.0075	0.9925	1.9719	1110	1128	2238	29245720	31795007	20538493	21335501	13	102914734	0.25	0.28	0.23	0.25	0.47	0.9138	0.1443	0.8715	1.9732	258196	673	688	1361	586315	501822	559204	572554	2219895	0.27	0.23	0.24	0.26	0.5	0.8651	0.3056	0.754	1.9433	0	20865515	22928593	14369867	14957213	0	73121188	0.27	0.3	0.21	0.22	0.43	0.8992	0.1895	0.8386	1.9487	265866	112	127	239	109539	110905	83743	88850	393037	0.28	0.25	0.23	0.24	0.47	0.8728	0.2564	0.79	1.955	0	1418921	1516604	995025	1019344	13	4949907	0.28	0.3	0.2	0.21	0.42	0.9048	0.1578	0.8644	1.9587	294	304	598	8966	10648	11036	14120	44770	0.2	0.24	0.25	0.32	0	0.56	0.8832	0.2464	0.7883	1.9686	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	16796	20634	5791	10461	13115	19851	13737	10974	12944	15227	10392	18645	12366	5221	9876	11720	11882	15674	12943	11862	23996	7407	13747	11257	22632	12943	6751	11882	7381	14479	11876	11485	9070	6988	13447	12141	10962	14497	8307	16358	14704	5779	17970	13260	11459	7975	11554	15581	9783	9477	4101	5994	6769	14051	13110	15795	3520	6838	6586	3448	12177	4362	10199	4263
GCF_024166365.1	NC_064820	NC_064820.1	Elephas maximus indicus isolate mEleMax1 chromosome 2; mEleMax1 primary haplotype; whole genome shotgun sequence.	70704248	70936184	47332001	47663683	713	236636829	0.3	0.3	0.2	0.2	0	0.4	0.9429	0.0051	0.9949	1.9718	712	696	1408	24701514	27133764	17775423	18430486	13	88041200	0.26	0.29	0.22	0.22	0.45	0.9211	0.1255	0.8874	1.9729	70995	599	571	1170	517064	449471	500750	506067	1973352	0.27	0.23	0.24	0.26	0.5	0.8645	0.3102	0.751	1.9403	4	18534555	20504360	13142400	13654324	13	65835652	0.27	0.3	0.21	0.22	0.43	0.901	0.1718	0.851	1.9491	0	87	95	182	69076	64223	56796	59056	249151	0.28	0.24	0.23	0.24	0.47	0.8697	0.2741	0.7755	1.9521	0	1157797	1261640	809945	835212	0	4064594	0.28	0.29	0.21	0.22	0.43	0.9057	0.1514	0.8681	1.9592	15	20	35	512	667	608	742	2529	0.2	0.26	0.24	0.29	0	0.53	0.8816	0.243	0.7903	1.9757	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	15448	17409	5214	9326	11586	17719	11534	9413	11740	12818	9691	15758	11056	4596	8349	10381	10637	15034	12504	10648	21251	6305	12685	10461	19334	11800	5745	10094	7040	12502	11467	9785	8412	6165	11973	11776	9863	12562	7909	15119	12992	5369	15651	11938	10494	7061	9738	13749	8808	8241	3805	5593	5781	12243	11194	13834	3018	6102	5879	3057	10271	3894	9137	3761
GCF_024166365.1	NC_064821	NC_064821.1	Elephas maximus indicus isolate mEleMax1 chromosome 3; mEleMax1 primary haplotype; whole genome shotgun sequence.	63870080	63664084	46883933	47039960	184103	221642160	0.29	0.29	0.21	0.21	0	0.42	0.9425	0.0033	0.9967	1.9829	1559	1645	3204	27234137	29722140	21533295	22289413	62	100779047	0.24	0.27	0.25	0.25	0.5	0.9126	0.1517	0.8662	1.9726	500597	1141	1276	2417	878374	780477	1009670	982208	3650729	0.25	0.21	0.27	0.27	0.54	0.8622	0.3111	0.7505	1.9365	0	18452359	20507296	14250888	14849610	0	68060153	0.24	0.27	0.24	0.25	0.49	0.8893	0.2186	0.8166	1.9475	0	155	130	285	104583	99053	86830	90395	380861	0.26	0.24	0.24	0.26	0.5	0.8694	0.2774	0.7739	1.9526	0	1016072	1058418	755062	775749	0	3605301	0.27	0.28	0.22	0.23	0.46	0.9042	0.1665	0.8561	1.9682	227	188	415	5093	7014	8347	9957	30411	0.17	0.23	0.27	0.33	0	0.6	0.8753	0.2594	0.7799	1.9495	1	0	1	27	29	30	33	119	0.23	0.24	0.25	0.28	0	0.53	0.887	0.0833	0.9201	1.9962	27488	30545	7637	16062	21989	34165	23011	13762	23315	26143	12502	24291	20241	9457	14650	18065	18864	28401	21815	15955	45073	12386	25214	15312	38908	24161	10201	16043	10412	23141	20741	16974	15756	7999	20999	21959	20716	29143	14632	34104	26666	12852	20676	26257	20991	10707	21703	22152	15357	14235	7344	12628	7977	25574	21605	27596	4878	14040	13204	6175	17116	5809	15783	7643
GCF_024166365.1	NC_064822	NC_064822.1	Elephas maximus indicus isolate mEleMax1 chromosome 4; mEleMax1 primary haplotype; whole genome shotgun sequence.	58712936	58717881	40034016	39791813	400	197257046	0.3	0.3	0.2	0.2	0	0.4	0.942	0.0031	0.9969	1.9736	805	825	1630	25379714	27717733	17906593	18644254	0	89648294	0.26	0.29	0.22	0.22	0.45	0.9208	0.1203	0.8912	1.9715	883960	681	693	1374	573868	504827	554997	553315	2187007	0.27	0.23	0.24	0.26	0.49	0.8638	0.3107	0.7502	1.9414	0	18295744	20159135	12734982	13282355	0	64472216	0.26	0.3	0.21	0.22	0.43	0.8959	0.1931	0.8356	1.9446	0	100	110	210	101026	98850	79914	82265	362055	0.28	0.24	0.23	0.25	0.47	0.8727	0.276	0.7769	1.951	0	1224937	1301594	832838	852328	0	4211697	0.28	0.3	0.21	0.22	0.43	0.9057	0.1513	0.8684	1.959	13	7	20	285	387	356	444	1472	0.19	0.26	0.24	0.3	0	0.54	0.8844	0.2706	0.7688	1.9731	0	1	1	26	31	28	35	120	0.22	0.26	0.23	0.29	0	0.53	0.8987	0.1988	0.8194	1.9909	16779	19448	6073	10741	13039	19176	13551	11709	12887	13818	10976	17659	12272	4595	9214	11994	12095	16215	13627	12329	24537	7100	14064	11387	21820	12906	7067	11485	8000	13801	12567	11161	9025	6934	13417	12474	10553	14277	8763	16686	14253	5822	17270	13238	11459	7905	10910	14536	9779	9140	3754	5379	6752	13722	11382	15141	3159	6636	5819	3321	12164	3903	9407	4294
GCF_024166365.1	NC_064823	NC_064823.1	Elephas maximus indicus isolate mEleMax1 chromosome 5; mEleMax1 primary haplotype; whole genome shotgun sequence.	50583370	50667333	32544643	32642096	26	166437468	0.3	0.3	0.2	0.2	0	0.39	0.9401	0.0023	0.9977	1.9659	376	346	722	17254005	18714094	11762735	12176432	0	59907266	0.28	0.3	0.21	0.22	0.42	0.9243	0.0989	0.9094	1.9639	353977	299	287	586	292517	244215	248831	261414	1046977	0.29	0.24	0.22	0.25	0.47	0.8647	0.3082	0.7524	1.9396	0	12650503	13879895	8471129	8803138	0	43804665	0.28	0.32	0.19	0.21	0.4	0.9035	0.1566	0.8625	1.9397	0	57	44	101	42225	40654	32231	32785	147895	0.28	0.25	0.23	0.24	0.47	0.8712	0.2779	0.7736	1.9509	0	415179	423981	280817	283664	0	1403641	0.27	0.3	0.21	0.22	0.43	0.8903	0.155	0.8643	1.9523	12	9	21	311	419	352	450	1532	0.2	0.27	0.23	0.29	0	0.52	0.8773	0.2857	0.7592	1.9742	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	7786	9707	3109	4922	6123	8996	6071	5692	5426	6696	6017	9921	6046	2271	5048	5751	5533	7208	5825	6324	10286	3332	5828	5851	10238	5268	3563	5702	3943	6771	5152	5875	4104	3956	6632	5823	4973	5445	3783	6690	6552	2424	10080	5715	5140	4233	4508	7736	4914	4891	1866	2847	3942	6102	5451	7449	1870	2892	2906	1630	6486	2649	5145	2108
GCF_024166365.1	NC_064824	NC_064824.1	Elephas maximus indicus isolate mEleMax1 chromosome 6; mEleMax1 primary haplotype; whole genome shotgun sequence.	43317034	43166817	29039016	28729428	744231	144996526	0.3	0.3	0.2	0.2	0.01	0.4	0.9421	0.0071	0.9929	1.9685	405	368	773	17492330	19049005	11990723	12456755	0	60988813	0.27	0.29	0.22	0.22	0.44	0.9241	0.1034	0.9055	1.9673	79751	334	300	634	378028	313764	332897	344811	1369500	0.28	0.23	0.23	0.25	0.49	0.8648	0.3079	0.7528	1.9411	0	12784371	14001044	8631933	8963723	0	44381071	0.28	0.31	0.2	0.21	0.41	0.8985	0.1715	0.8514	1.9396	0	61	62	123	78541	81075	56272	58768	274656	0.29	0.25	0.22	0.24	0.46	0.8717	0.2751	0.7779	1.9464	0	1052468	1128637	726192	743297	0	3650594	0.28	0.3	0.2	0.21	0.41	0.909	0.1402	0.8781	1.9585	2	6	8	107	151	151	181	590	0.18	0.26	0.26	0.31	0	0.56	0.8829	0.262	0.7735	1.9724	1	0	1	24	28	30	37	119	0.2	0.24	0.25	0.31	0	0.56	0.8809	0.1814	0.834	1.9822	11274	13730	3671	6317	8288	11694	7617	6976	7374	8898	7474	11842	8172	3111	6359	7401	6900	9763	7871	7549	14647	4643	7907	7209	13768	7238	4431	7871	4746	8823	6977	6948	5199	5004	8667	7536	6803	7837	5267	9405	8727	3312	12616	7654	6861	5172	5967	9798	5659	5931	2487	3615	5050	8256	7467	10062	2569	3727	3774	2109	8133	3334	6480	2478
GCF_024166365.1	NC_064825	NC_064825.1	Elephas maximus indicus isolate mEleMax1 chromosome 7; mEleMax1 primary haplotype; whole genome shotgun sequence.	40722230	40517948	28476049	28337529	1213	138054969	0.29	0.29	0.21	0.21	0	0.41	0.9403	0.005	0.9951	1.9773	988	1053	2041	14715053	16092025	11148629	11506994	0	53462701	0.24	0.29	0.24	0.22	0.46	0.9097	0.1854	0.8374	1.9708	161961	902	934	1836	588394	614550	658980	595085	2457009	0.25	0.23	0.26	0.26	0.52	0.8638	0.3111	0.749	1.9391	0	10904929	11985780	7997881	8343526	0	39232116	0.24	0.27	0.24	0.25	0.49	0.8885	0.2135	0.8208	1.942	54652	59	81	140	33826	32110	28064	28854	122854	0.27	0.25	0.24	0.25	0.48	0.8701	0.2583	0.7873	1.9584	0	470916	494790	339547	337015	0	1642268	0.26	0.28	0.22	0.23	0.45	0.893	0.1557	0.8647	1.965	5	10	15	218	270	267	337	1092	0.2	0.25	0.24	0.31	0	0.55	0.8748	0.2543	0.7817	1.9729	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	22225	17842	6912	12650	13595	18893	16044	14888	16824	13659	11564	14151	12869	5031	9161	12298	14012	20727	19591	17031	30332	7573	19199	11047	21134	15989	8392	13933	10936	13410	19862	13747	12520	7926	14444	13690	14096	17566	11512	21270	13778	7224	14795	15027	13096	9354	12277	12577	12444	10438	3551	5713	7401	15412	12258	16959	2349	7114	6255	3580	11125	3055	7773	4214
GCF_024166365.1	NC_064826	NC_064826.1	Elephas maximus indicus isolate mEleMax1 chromosome 8; mEleMax1 primary haplotype; whole genome shotgun sequence.	40302804	40440768	26936878	26840678	526	134521654	0.3	0.3	0.2	0.2	0	0.4	0.9447	0.0035	0.9965	1.9708	348	432	780	17873216	19591732	12531715	12908631	0	62905294	0.26	0.29	0.22	0.23	0.45	0.9205	0.1127	0.898	1.97	30163	290	379	669	278753	241172	272050	271915	1063890	0.27	0.23	0.24	0.25	0.49	0.8637	0.3041	0.7551	1.9414	0	13888861	15291147	9665735	9950443	0	48796186	0.27	0.31	0.21	0.22	0.42	0.9022	0.1665	0.8559	1.9472	0	46	35	81	47427	46959	33978	36713	165077	0.28	0.26	0.22	0.24	0.46	0.8731	0.2809	0.7703	1.9509	0	726788	792397	489166	499571	0	2507922	0.28	0.31	0.2	0.21	0.41	0.9057	0.1488	0.8697	1.9564	4	9	13	199	231	223	295	948	0.21	0.24	0.24	0.31	0	0.55	0.8857	0.224	0.807	1.9753	0	2	2	49	55	61	73	238	0.21	0.23	0.26	0.31	0	0.56	0.8926	0.1472	0.8637	1.984	7955	9204	2715	5295	6379	8617	6411	5197	6462	7302	5249	8867	6082	2650	4652	5699	5614	7764	6232	5834	11413	3621	6536	5532	10407	6436	2973	5293	3718	6540	5602	5313	4363	3486	6844	5818	5320	7218	4167	8113	7110	2944	8527	6521	5823	3893	5439	7365	4697	4517	2077	3241	3333	6961	6189	7411	1388	3277	3166	1769	5790	1944	4572	2036
GCF_024166365.1	NC_064827	NC_064827.1	Elephas maximus indicus isolate mEleMax1 chromosome 9; mEleMax1 primary haplotype; whole genome shotgun sequence.	37087130	37200353	26480701	26663388	1100	127432672	0.29	0.29	0.21	0.21	0	0.42	0.9451	0.005	0.9951	1.98	454	508	962	15097931	16607704	11441862	11922509	0	55070006	0.25	0.28	0.23	0.24	0.47	0.9217	0.1125	0.8979	1.9743	127576	385	419	804	362244	309353	381632	377609	1430838	0.26	0.22	0.25	0.27	0.52	0.8642	0.2981	0.759	1.9419	0	10941192	12203592	8204389	8583882	0	39933055	0.25	0.29	0.23	0.24	0.46	0.8975	0.1853	0.841	1.953	0	57	63	120	63679	61620	49799	52658	227756	0.27	0.25	0.24	0.24	0.48	0.8769	0.2558	0.7884	1.9569	2	908117	1028963	648663	675154	0	3260897	0.27	0.3	0.21	0.22	0.43	0.9008	0.1696	0.8539	1.9567	3	13	16	220	315	270	334	1139	0.19	0.28	0.24	0.29	0	0.53	0.8672	0.286	0.7574	1.9755	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	10522	12344	3426	6322	8741	13140	8841	5859	8705	9633	6223	10924	7995	3424	5933	7461	7396	10986	8299	6494	16659	4712	9467	6925	15340	8735	3928	6533	4119	9436	7712	6913	6018	3804	8441	8819	7679	10607	5393	12248	10035	4447	9895	9765	7839	4622	7808	9736	5877	6128	2746	4246	3697	10014	8310	10526	1809	4865	4888	2411	7391	2309	6282	2914
GCF_024166365.1	NC_064828	NC_064828.1	Elephas maximus indicus isolate mEleMax1 chromosome 10; mEleMax1 primary haplotype; whole genome shotgun sequence.	35428829	35491573	24775499	24424215	600	120120716	0.29	0.3	0.21	0.2	0	0.41	0.9424	0.008	0.992	1.9763	580	592	1172	14209356	15725555	10364164	10813509	0	51112584	0.25	0.29	0.23	0.23	0.46	0.915	0.1462	0.8715	1.9719	240966	471	466	937	404643	365616	405652	408152	1584063	0.27	0.23	0.24	0.26	0.5	0.8638	0.3093	0.7511	1.9414	0	10124815	11290625	7251189	7590651	0	36257280	0.26	0.3	0.22	0.23	0.44	0.8957	0.1947	0.8337	1.9481	0	66	88	154	70200	70215	56747	59684	256846	0.28	0.25	0.23	0.24	0.47	0.8731	0.2488	0.7956	1.9543	0	620008	671756	445859	459986	0	2197609	0.27	0.29	0.21	0.23	0.44	0.9051	0.1655	0.8571	1.961	21	27	48	685	893	903	1152	3633	0.19	0.25	0.25	0.32	0	0.57	0.8778	0.268	0.7743	1.9654	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	12175	13876	4147	7615	9527	15336	9904	7685	9555	10095	7242	12904	8629	3446	6720	8065	8849	12395	10411	9264	18427	5170	10630	8318	15693	9150	5043	8311	5379	9606	9182	8491	6695	4759	8822	9541	7917	10167	6110	12638	10417	4320	11631	9871	8309	5681	8006	10369	6931	6421	2744	4175	4808	10439	8874	11080	2044	4937	4326	2397	7956	2621	6397	3051
GCF_024166365.1	NC_064829	NC_064829.1	Elephas maximus indicus isolate mEleMax1 chromosome 11; mEleMax1 primary haplotype; whole genome shotgun sequence.	34871829	33448713	25079128	23647901	4586	117052157	0.3	0.29	0.21	0.2	0	0.42	0.9416	0.0502	0.9511	1.9792	629	566	1195	13344993	14599001	10258724	10624122	0	48826840	0.25	0.27	0.24	0.25	0.48	0.9219	0.1154	0.895	1.9778	211100	504	478	982	392222	333502	450129	447361	1623214	0.24	0.21	0.27	0.28	0.55	0.8605	0.3073	0.7525	1.9328	40	8967345	9947308	6706765	6994196	0	32615614	0.24	0.27	0.24	0.25	0.49	0.8883	0.2454	0.799	1.9426	0	64	58	122	44688	43363	38895	42450	169396	0.27	0.24	0.24	0.26	0.5	0.8681	0.2876	0.7686	1.9487	0	564948	614067	425127	430811	0	2034953	0.26	0.28	0.22	0.23	0.45	0.9025	0.1684	0.8549	1.9658	9	3	12	169	239	213	263	884	0.19	0.27	0.24	0.3	0	0.54	0.8733	0.2734	0.7647	1.9763	18	0	18	7450	6907	13079	14265	41701	0.2	0.19	0.29	0.32	0	0.61	0.9077	0.0765	0.9266	1.9526	11338	12975	4119	6494	9643	16453	10128	5319	10177	11062	6987	10588	9012	4489	6492	8630	7658	14155	9724	6021	19144	5128	10401	6428	16054	10446	3944	7019	3827	10213	8520	7073	6871	4791	9587	9512	9216	14227	5471	15010	11737	6678	9605	12413	9070	4415	10729	11389	5900	6049	3551	6569	4343	11977	10556	11938	1723	7216	6858	2808	7010	2097	6492	3305
GCF_024166365.1	NC_064830	NC_064830.1	Elephas maximus indicus isolate mEleMax1 chromosome 12; mEleMax1 primary haplotype; whole genome shotgun sequence.	31875448	31791999	23571949	23636020	613	110876029	0.29	0.29	0.21	0.21	0	0.43	0.9439	0.0027	0.9973	1.984	525	506	1031	13608252	15059949	10745354	11164137	0	50577692	0.24	0.26	0.24	0.25	0.49	0.922	0.1063	0.9029	1.9779	310261	441	413	854	366928	315576	418890	418393	1519787	0.25	0.21	0.26	0.27	0.54	0.8618	0.3023	0.7562	1.94	0	10421174	11706623	8056213	8406030	0	38590040	0.24	0.28	0.24	0.25	0.49	0.8911	0.2188	0.8167	1.9511	0	56	59	115	59288	60223	51423	53192	224126	0.26	0.24	0.24	0.26	0.5	0.871	0.2775	0.7749	1.9501	0	501809	525575	373377	379877	0	1780638	0.25	0.28	0.23	0.24	0.47	0.8932	0.1909	0.8384	1.9604	13	8	21	279	376	384	487	1526	0.18	0.25	0.25	0.32	0	0.57	0.8812	0.2954	0.7514	1.9616	1	0	1	23	27	30	39	119	0.19	0.23	0.25	0.33	0	0.58	0.8987	0.2104	0.8105	1.9725	10368	12716	3299	6361	9383	15345	9791	5206	9398	11102	5372	10587	8084	3873	5953	7199	7507	11948	8287	6171	18617	5053	10152	6630	16624	9707	4113	6603	3620	9888	7551	6722	6262	3474	8587	9411	8499	12293	5458	14003	11300	5543	8878	11254	9048	4662	9352	9713	6192	6108	3224	5272	3393	10960	9430	11758	1934	6475	5793	2876	7376	2252	6735	3207
GCF_024166365.1	NC_064831	NC_064831.1	Elephas maximus indicus isolate mEleMax1 chromosome 13; mEleMax1 primary haplotype; whole genome shotgun sequence.	31031312	30652080	22350901	21896854	79439	106010586	0.29	0.29	0.21	0.21	0	0.42	0.9402	0.0164	0.9837	1.9799	781	285	1066	11710597	13025934	8633080	9058780	0	42428391	0.29	0.25	0.22	0.24	0.46	0.8998	0.2118	0.8195	1.9726	52420	219	229	448	222354	186781	220500	226025	855660	0.27	0.23	0.24	0.26	0.5	0.8662	0.3038	0.7552	1.9437	0	9119083	10219184	6624304	6949111	0	32911682	0.26	0.3	0.21	0.23	0.44	0.9031	0.1703	0.8515	1.9557	0	547	43	590	62577	57417	45823	49171	214988	0.3	0.23	0.22	0.25	0.47	0.8695	0.3136	0.7413	1.963	0	262190	272773	189176	194158	0	918297	0.27	0.29	0.22	0.22	0.44	0.8973	0.1856	0.8429	1.9621	6	10	16	233	303	285	344	1165	0.2	0.26	0.24	0.29	0	0.54	0.8779	0.2249	0.8045	1.9737	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	6006	7588	2072	3802	5249	8250	5062	3669	4994	5780	3805	7100	4749	2101	3761	4423	4442	6476	4773	4182	9423	2722	5122	4495	9081	4930	2364	4255	2721	5606	4299	4176	3514	2318	5050	5315	4539	5648	3011	6845	6143	2593	6563	5512	4551	2908	4484	5827	3688	3656	1776	2562	2544	5540	4861	6272	1224	2921	2869	1472	4672	1563	3995	1846
GCF_024166365.1	NC_064832	NC_064832.1	Elephas maximus indicus isolate mEleMax1 chromosome 14; mEleMax1 primary haplotype; whole genome shotgun sequence.	29792595	29650536	20428815	20220259	1439	100093644	0.3	0.3	0.2	0.2	0	0.41	0.9348	0.0075	0.9925	1.9744	146	146	292	7884805	8609938	5388207	5609770	13	27492733	0.27	0.3	0.21	0.21	0.42	0.922	0.1197	0.8917	1.9694	174979	103	105	208	105536	90553	91478	92596	380163	0.3	0.24	0.22	0.24	0.46	0.8672	0.3054	0.7529	1.9408	0	5820554	6434302	3893290	4068034	0	20216180	0.28	0.32	0.19	0.2	0.39	0.9084	0.1552	0.8628	1.9468	0	29	36	65	40050	42622	29293	30912	142877	0.28	0.26	0.22	0.24	0.46	0.8694	0.2646	0.7826	1.9538	0	630513	655813	451882	453896	0	2192104	0.28	0.3	0.21	0.21	0.42	0.9061	0.1489	0.8683	1.9595	8	3	11	151	215	188	234	788	0.19	0.27	0.24	0.3	0	0.54	0.8754	0.2976	0.7528	1.967	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3046	3597	1085	1865	2006	3237	2079	2195	2038	2115	2157	3540	2080	886	1721	2350	2038	2797	2477	2398	3731	1153	2482	2159	3728	2009	1202	2145	1428	2211	2290	2085	1670	1451	2339	2410	1926	2011	1573	2480	2280	870	3718	1977	1754	1670	1588	2639	1707	1694	717	955	1462	2158	1755	2329	612	950	1110	613	2130	896	1698	680
GCF_024166365.1	NC_064833	NC_064833.1	Elephas maximus indicus isolate mEleMax1 chromosome 15; mEleMax1 primary haplotype; whole genome shotgun sequence.	28876646	28716467	19480433	19419174	800	96493520	0.3	0.3	0.2	0.2	0	0.4	0.9461	0.0044	0.9957	1.9727	261	209	470	10335000	11345940	7243668	7564808	0	36489416	0.26	0.28	0.22	0.23	0.46	0.9217	0.1026	0.9057	1.9635	6925	212	170	382	180724	153880	177397	183688	695689	0.27	0.23	0.24	0.26	0.5	0.8637	0.2975	0.7596	1.9371	0	7899822	8728064	5412872	5656449	0	27697207	0.26	0.3	0.21	0.23	0.44	0.896	0.1823	0.8437	1.9328	0	43	28	71	30779	28396	23414	24043	106632	0.28	0.25	0.23	0.24	0.47	0.8687	0.2679	0.7789	1.9538	0	399879	425328	300302	308974	0	1434483	0.28	0.3	0.21	0.21	0.42	0.9082	0.1475	0.8702	1.9575	5	6	11	153	198	194	261	806	0.19	0.25	0.24	0.32	0	0.56	0.874	0.2883	0.7621	1.9649	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5098	5997	1802	3049	4340	6723	4159	3306	3816	4523	3399	5500	3562	1730	2976	3532	3335	5452	3926	3645	8050	2276	3879	3377	7497	3813	2043	3427	2246	4378	3627	3522	2769	2131	4136	4166	3593	4495	2647	5478	4644	2312	5453	4750	3625	2479	3490	4758	2874	2844	1356	2484	2276	4498	3723	4828	1102	2589	2257	1263	3742	1478	3086	1426
GCF_024166365.1	NC_064834	NC_064834.1	Elephas maximus indicus isolate mEleMax1 chromosome 16; mEleMax1 primary haplotype; whole genome shotgun sequence.	26975069	26975331	20107624	20461057	518297	95037378	0.28	0.28	0.21	0.22	0.01	0.43	0.9463	0.0087	0.9914	1.9825	316	313	629	11921153	13144195	8910966	9332146	0	43308460	0.26	0.28	0.22	0.23	0.46	0.9253	0.1069	0.9021	1.9745	40991	278	263	541	247908	206583	245955	249105	949551	0.27	0.22	0.24	0.26	0.5	0.8655	0.3021	0.7567	1.9435	0	9161007	10169785	6711537	7024266	0	33066595	0.26	0.3	0.21	0.23	0.44	0.9012	0.1759	0.8476	1.9554	0	30	44	74	19041	19298	16049	16545	70933	0.27	0.25	0.23	0.25	0.48	0.8735	0.2764	0.7757	1.9528	0	299772	333137	228123	229650	0	1090682	0.27	0.29	0.22	0.22	0.44	0.9075	0.1434	0.8744	1.9681	5	4	9	121	182	153	197	653	0.19	0.28	0.23	0.3	0	0.53	0.8743	0.328	0.7231	1.9707	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	6863	8479	2341	4285	5904	8540	5839	4218	5489	6488	4364	7837	4957	2375	3971	4896	4698	6910	5227	4634	10116	3034	6007	4722	9817	5569	2922	4852	2833	6241	4815	4583	3838	2635	5622	5648	5035	6537	3577	7470	6521	2759	7627	6261	5182	3276	5015	6744	4018	3965	1906	3002	2631	6294	5442	7236	1381	3314	3172	1533	5210	1839	4387	2035
GCF_024166365.1	NC_064835	NC_064835.1	Elephas maximus indicus isolate mEleMax1 chromosome 17; mEleMax1 primary haplotype; whole genome shotgun sequence.	27330665	26230610	19346188	18594630	239	91502332	0.3	0.29	0.21	0.2	0	0.41	0.9416	0.0403	0.9605	1.9786	432	374	806	10031587	10853755	7588885	7896899	13	36371139	0.26	0.29	0.23	0.23	0.45	0.9184	0.1327	0.8807	1.9785	82384	374	326	700	243327	227448	256519	246355	973649	0.26	0.23	0.25	0.26	0.51	0.865	0.3059	0.7541	1.9459	0	6948228	7633280	5224380	5468255	13	25274156	0.25	0.29	0.22	0.23	0.45	0.899	0.1949	0.8336	1.959	0	45	42	87	52762	52053	40117	41169	186101	0.27	0.25	0.23	0.25	0.48	0.876	0.2496	0.7942	1.9568	0	468033	486767	340319	347651	0	1642770	0.27	0.29	0.22	0.22	0.44	0.9004	0.1583	0.8627	1.9632	4	2	6	76	123	102	136	437	0.17	0.28	0.23	0.31	0	0.54	0.873	0.3821	0.6842	1.9612	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	7935	7879	2387	5034	5871	8166	5906	4859	6731	6100	4300	6689	5588	2183	4220	5070	5754	8025	6579	5442	11228	3151	7318	4481	9625	6262	2945	4931	3544	5870	6084	5009	4257	2732	5790	4982	4993	6802	4074	7572	6846	2527	6653	5865	5565	3561	5305	6361	4339	3926	1684	2491	2628	6348	5355	7053	1175	2883	2652	1461	4525	1601	4133	1767
GCF_024166365.1	NC_064836	NC_064836.1	Elephas maximus indicus isolate mEleMax1 chromosome 18; mEleMax1 primary haplotype; whole genome shotgun sequence.	25656798	25331516	16690110	17086095	400	84764919	0.3	0.3	0.2	0.2	0	0.4	0.9424	0.0181	0.9821	1.97	241	192	433	7767527	8374671	5447358	5643406	0	27232962	0.27	0.29	0.22	0.22	0.44	0.9211	0.1173	0.8942	1.9727	27291	193	143	336	146356	126106	136816	136917	546195	0.27	0.23	0.24	0.25	0.5	0.8655	0.3073	0.7527	1.9444	0	5321044	5791001	3690352	3835351	0	18637748	0.27	0.3	0.21	0.22	0.43	0.9033	0.1657	0.8552	1.9561	0	36	40	76	54979	56060	37574	39117	187730	0.28	0.25	0.23	0.24	0.47	0.8719	0.2708	0.7816	1.9518	0	430847	460320	280376	287974	0	1459517	0.28	0.3	0.2	0.22	0.42	0.9035	0.1683	0.8569	1.9553	2	5	7	95	133	129	158	515	0.18	0.26	0.25	0.31	0	0.56	0.8874	0.2758	0.7627	1.9732	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4446	5075	1534	2590	3242	4699	3262	2793	3308	3479	2700	4396	3067	1192	2503	2992	3060	3717	3104	3161	6060	1705	3547	2705	5507	3132	1713	2866	1963	3392	2922	2806	2274	1785	3176	2981	2758	3333	2238	3839	3551	1343	4722	3109	2885	1937	2720	3945	2559	2390	938	1217	1895	3387	2914	4063	884	1615	1477	842	3234	1098	2480	1028
GCF_024166365.1	NC_064837	NC_064837.1	Elephas maximus indicus isolate mEleMax1 chromosome 19; mEleMax1 primary haplotype; whole genome shotgun sequence.	23806498	24372459	18473647	19109456	21567	85783627	0.28	0.28	0.22	0.22	0	0.44	0.9479	0.0287	0.9718	1.9887	674	700	1374	11578204	12707590	9554825	9924413	0	43765032	0.24	0.26	0.25	0.25	0.5	0.9175	0.1173	0.8938	1.9772	35757	544	564	1108	449048	382904	522655	520380	1874987	0.25	0.21	0.26	0.28	0.54	0.8625	0.3093	0.7507	1.9403	0	8361421	9321237	6704415	6999759	0	31386832	0.23	0.27	0.24	0.25	0.49	0.8871	0.2243	0.8117	1.9497	0	103	67	170	51454	49022	43675	44865	189016	0.26	0.24	0.24	0.26	0.5	0.8712	0.2513	0.7923	1.9546	0	326756	336689	244748	249444	0	1157637	0.26	0.28	0.23	0.23	0.46	0.9029	0.1761	0.8475	1.9683	20	25	45	629	802	823	1045	3299	0.19	0.24	0.25	0.32	0	0.56	0.8853	0.239	0.7916	1.9694	0	30	30	12427	11504	21790	23785	69506	0.2	0.19	0.29	0.32	0	0.61	0.9077	0.0778	0.9254	1.9528	12816	16343	3851	7537	11392	20490	12436	6260	11995	13323	6170	12878	9184	4794	6840	9437	8810	14684	10567	7154	23705	6293	12601	8014	20877	12295	4989	7664	4594	12060	10167	8229	7986	3966	9939	12162	10306	15957	6964	17717	14230	7043	10514	14343	11987	5285	11762	11350	7406	7313	3865	6547	3638	12856	11387	14213	2128	7906	7095	3347	9154	2505	8336	4120
GCF_024166365.1	NC_064838	NC_064838.1	Elephas maximus indicus isolate mEleMax1 chromosome 20; mEleMax1 primary haplotype; whole genome shotgun sequence.	24164621	24323577	17580435	18040160	483	84109276	0.29	0.29	0.21	0.21	0	0.42	0.9475	0.0162	0.984	1.983	367	366	733	11049815	12201305	8556232	8951620	0	40758972	0.25	0.29	0.23	0.23	0.46	0.9191	0.136	0.8773	1.9769	10187	308	323	631	252622	236572	281000	274451	1044645	0.25	0.22	0.26	0.27	0.53	0.8653	0.2997	0.7575	1.9433	0	8151718	9091957	6250621	6569364	0	30063660	0.24	0.28	0.24	0.25	0.49	0.8915	0.2098	0.8228	1.9532	0	40	33	73	26284	25258	22879	23624	98045	0.27	0.25	0.23	0.25	0.48	0.8681	0.2897	0.768	1.9462	0	279999	286862	203642	204935	0	975438	0.27	0.28	0.22	0.23	0.45	0.9047	0.1617	0.8589	1.9653	3	8	11	148	212	190	238	788	0.19	0.27	0.24	0.3	0	0.54	0.8787	0.2886	0.7565	1.9739	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8043	8593	2578	4832	6175	9433	6764	4771	6595	6481	4368	6676	5351	2487	4065	5359	5250	9171	6878	5652	12989	3393	6955	4761	10702	6623	3061	5262	3445	6498	6725	5139	4789	2872	5985	6493	5610	7735	4468	9296	6894	3458	6400	7348	6059	3524	5897	6021	4743	4301	1971	3027	2696	7067	5816	7255	1048	3724	3168	1884	4736	1338	3877	2088
GCF_024166365.1	NC_064839	NC_064839.1	Elephas maximus indicus isolate mEleMax1 chromosome 21; mEleMax1 primary haplotype; whole genome shotgun sequence.	24143234	24349693	17518769	17875081	900	83887677	0.29	0.29	0.21	0.21	0	0.42	0.9443	0.0143	0.9858	1.9823	319	353	672	8670067	9460959	6645554	6900805	0	31677385	0.25	0.27	0.23	0.25	0.48	0.9197	0.1054	0.903	1.9785	5364	267	256	523	210451	180099	228398	229176	848124	0.26	0.22	0.26	0.27	0.53	0.8646	0.2933	0.7623	1.9448	4	6211432	6853230	4679886	4873142	0	22617690	0.25	0.28	0.23	0.24	0.47	0.895	0.1936	0.8345	1.9546	0	42	38	80	50738	51659	39290	41087	182774	0.26	0.25	0.24	0.25	0.49	0.8727	0.2565	0.7907	1.9537	0	412388	444936	298921	304266	0	1460511	0.27	0.29	0.22	0.22	0.44	0.9071	0.1488	0.8705	1.9638	8	10	18	250	328	334	408	1320	0.19	0.25	0.25	0.31	0	0.56	0.8831	0.2386	0.7943	1.9691	1	40	41	906	1020	1361	1592	4879	0.19	0.21	0.28	0.33	0	0.61	0.8766	0.1383	0.8711	1.9637	6013	7311	1894	3856	5491	8278	5450	3255	5100	5982	3258	6189	4491	2215	3482	4228	4176	6661	4537	3821	10211	2834	5179	3994	9209	5115	2303	3889	2238	5164	4218	4013	3452	2085	5140	5238	4676	6462	3038	7069	6255	2747	5362	5903	5123	2637	4753	5650	3699	3459	1770	2735	1986	6144	5423	6564	1088	3214	3170	1497	4243	1231	3611	1821
GCF_024166365.1	NC_064840	NC_064840.1	Elephas maximus indicus isolate mEleMax1 chromosome 22; mEleMax1 primary haplotype; whole genome shotgun sequence.	23480696	23332725	17492670	17670113	400	81976604	0.29	0.28	0.21	0.22	0	0.43	0.9467	0.0082	0.9918	1.9854	375	385	760	10823369	12037826	8623458	8993832	0	40478485	0.26	0.28	0.23	0.24	0.47	0.9259	0.0988	0.9088	1.9798	294201	308	331	639	284048	234148	306890	310091	1135177	0.26	0.21	0.26	0.27	0.53	0.8636	0.3051	0.7546	1.9414	0	7738592	8726099	6056987	6324681	0	28846359	0.25	0.28	0.23	0.24	0.47	0.8994	0.1834	0.8417	1.9599	0	50	42	92	38634	36495	30901	33077	139107	0.26	0.24	0.24	0.26	0.5	0.8696	0.2645	0.781	1.9529	0	543386	583287	429006	441137	0	1996816	0.26	0.29	0.22	0.23	0.45	0.9006	0.1615	0.8584	1.9601	9	8	17	237	326	296	358	1217	0.19	0.27	0.24	0.29	0	0.54	0.8761	0.2559	0.7793	1.9752	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	7601	10394	2432	4767	7083	11791	6871	4136	6896	7950	4249	8715	5984	3182	4550	5745	5429	8817	6009	4698	12975	3614	7247	5059	12437	7180	3011	4919	2905	7541	5927	5224	4680	2657	6232	7236	6206	8780	4110	9907	8388	3948	7530	8058	6519	3466	6418	7646	4663	4628	2518	3852	2555	7622	6996	8643	1342	4701	4472	2159	5630	1810	5009	2645
GCF_024166365.1	NC_064841	NC_064841.1	Elephas maximus indicus isolate mEleMax1 chromosome 23; mEleMax1 primary haplotype; whole genome shotgun sequence.	23870256	23790676	16070853	16142868	400	79875053	0.3	0.3	0.2	0.2	0	0.4	0.9429	0.0039	0.9961	1.9728	169	190	359	9138236	9926893	6280520	6549843	0	31895492	0.28	0.29	0.21	0.22	0.43	0.9262	0.1026	0.9061	1.9705	27470	136	140	276	147981	121654	118975	124420	513030	0.29	0.24	0.22	0.24	0.46	0.867	0.2975	0.7593	1.9444	0	6765939	7428754	4614041	4818976	0	23627710	0.29	0.32	0.19	0.2	0.39	0.9065	0.1563	0.8625	1.9458	0	30	41	71	29634	28059	23142	24575	105410	0.28	0.25	0.23	0.24	0.47	0.8736	0.25	0.7913	1.9625	0	464526	492005	308484	316774	0	1581789	0.28	0.3	0.2	0.21	0.42	0.9034	0.1406	0.8751	1.9646	2	5	7	96	129	124	154	503	0.19	0.26	0.25	0.31	0	0.55	0.874	0.2603	0.7812	1.9695	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3901	4871	1409	2460	2908	3876	2648	2984	2639	3137	3163	4911	2972	1264	2370	3003	2620	3156	3369	3439	4572	1616	2739	2817	4790	2648	1479	2834	2137	3456	2759	2721	2028	1995	3427	2791	2455	2450	2204	3073	3106	1095	5597	2720	2540	2149	2094	4254	2395	2459	1011	1388	2016	2741	2556	3208	1022	1288	1410	766	3219	1564	2526	1002
GCF_024166365.1	NC_064842	NC_064842.1	Elephas maximus indicus isolate mEleMax1 chromosome 24; mEleMax1 primary haplotype; whole genome shotgun sequence.	20009754	20124499	13786351	13817557	213	67738374	0.3	0.3	0.2	0.2	0	0.41	0.9446	0.004	0.996	1.9752	178	170	348	8901626	9707223	6122409	6377672	0	31108930	0.28	0.3	0.21	0.22	0.42	0.9261	0.1025	0.906	1.9701	396	147	123	270	160238	132520	137653	145718	576129	0.29	0.24	0.22	0.25	0.47	0.8677	0.2953	0.7601	1.9469	0	6773563	7514877	4637711	4854541	0	23780692	0.28	0.32	0.19	0.2	0.4	0.9073	0.1512	0.8663	1.948	0	26	39	65	17706	17309	14397	15015	64427	0.3	0.25	0.22	0.24	0.46	0.8672	0.3074	0.7553	1.9441	0	497342	498250	326693	330303	0	1652588	0.29	0.3	0.19	0.21	0.41	0.9036	0.1514	0.8685	1.9562	2	2	4	56	82	67	82	287	0.2	0.29	0.23	0.29	0	0.52	0.8759	0.3008	0.7458	1.976	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4437	5499	1624	2774	3458	5155	3354	3046	3106	3749	3073	5271	3181	1289	2677	3032	3162	3936	3311	3142	5638	1800	3418	3068	5905	2925	1905	3273	2038	3800	2896	3063	2220	2151	3687	3032	2648	3148	2024	3830	3660	1193	5384	3014	2778	2287	2647	4510	2470	2389	1058	1499	2193	3424	3291	4085	1084	1674	1595	957	3535	1421	3037	1130
GCF_024166365.1	NC_064843	NC_064843.1	Elephas maximus indicus isolate mEleMax1 chromosome 25; mEleMax1 primary haplotype; whole genome shotgun sequence.	19140138	19930999	14814233	14971767	200	68857337	0.28	0.29	0.22	0.22	0	0.43	0.9459	0.0255	0.9749	1.9867	287	326	613	7974100	8799210	6449711	6697000	0	29920021	0.25	0.27	0.24	0.25	0.49	0.924	0.1015	0.9067	1.98	63383	247	276	523	194013	160589	228495	227480	810577	0.25	0.21	0.27	0.28	0.54	0.8624	0.3076	0.7525	1.9382	0	6060531	6732918	4808487	5001161	0	22603097	0.24	0.27	0.24	0.25	0.49	0.8954	0.1951	0.8335	1.9575	0	29	42	71	15058	14213	12978	13492	55741	0.27	0.25	0.23	0.25	0.48	0.873	0.2584	0.7886	1.9574	0	183527	195276	140231	141646	0	660680	0.26	0.29	0.22	0.23	0.45	0.904	0.1742	0.8499	1.9657	5	3	8	122	166	127	167	582	0.21	0.28	0.22	0.29	0	0.51	0.8761	0.2852	0.7592	1.9745	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5590	7103	1579	3384	5234	8479	5175	2570	5082	5810	2602	5276	4110	2368	3252	3910	3527	6389	4247	3012	9558	2649	5287	3389	8808	5625	2031	3231	1712	5377	4039	3394	3391	1591	4374	5293	4543	6778	2928	7984	6550	3289	4539	6369	4965	2175	4990	5186	3098	3096	1968	3376	1568	5605	5303	6554	855	3518	3646	1501	3780	959	3411	1808
GCF_024166365.1	NC_064844	NC_064844.1	Elephas maximus indicus isolate mEleMax1 chromosome 26; mEleMax1 primary haplotype; whole genome shotgun sequence.	14445025	14385321	9945683	9829487	400	48605916	0.3	0.3	0.2	0.2	0	0.41	0.9469	0.0079	0.9921	1.9748	107	108	215	5434607	6122967	3877801	4069982	0	19505357	0.27	0.3	0.21	0.22	0.43	0.9248	0.1099	0.8993	1.9701	24601	85	82	167	93521	78633	78845	84356	335355	0.29	0.24	0.22	0.25	0.47	0.8657	0.2969	0.759	1.9462	0	4275660	4840264	3024215	3177186	0	15317325	0.28	0.33	0.19	0.2	0.4	0.9045	0.1716	0.8503	1.9441	0	18	21	39	15527	14840	12724	13017	56108	0.28	0.25	0.23	0.24	0.47	0.8637	0.2824	0.7723	1.9485	0	228728	249720	159811	165289	0	803548	0.28	0.3	0.2	0.22	0.42	0.8859	0.1717	0.8542	1.9595	2	3	5	73	96	87	104	360	0.2	0.26	0.24	0.29	0	0.54	0.8706	0.2231	0.8018	1.9783	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2577	3113	1013	1570	2039	2859	1910	1843	1690	2203	1837	3178	1904	785	1542	1776	1778	2233	1944	2013	3194	1075	1840	1938	3287	1620	1038	1975	1287	2243	1573	1849	1323	1305	2106	1932	1602	1671	1275	2227	2148	800	3167	1763	1660	1407	1344	2475	1527	1565	617	917	1366	1858	1766	2141	623	969	959	549	2041	877	1709	766
GCF_024166365.1	NC_064845	NC_064845.1	Elephas maximus indicus isolate mEleMax1 chromosome 27; mEleMax1 primary haplotype; whole genome shotgun sequence.	11225984	11200222	8012278	7938988	800	38378272	0.29	0.29	0.21	0.21	0	0.42	0.9477	0.0057	0.9943	1.9793	95	110	205	5737744	6168585	4220629	4394893	400	20522251	0.26	0.28	0.22	0.23	0.45	0.9214	0.1176	0.8932	1.9762	122327	59	81	140	73611	63405	70939	73156	281111	0.27	0.23	0.24	0.26	0.5	0.8663	0.2978	0.7595	1.9466	0	3576773	3944112	2601670	2728048	0	12850603	0.26	0.3	0.21	0.23	0.44	0.9029	0.173	0.8502	1.9538	0	24	28	52	28786	29270	21548	23577	103181	0.27	0.25	0.23	0.26	0.49	0.8623	0.2915	0.7621	1.9546	0	670219	734735	502956	523544	200	2431654	0.25	0.3	0.22	0.23	0.45	0.887	0.2102	0.822	1.9607	7	0	7	100	126	124	164	514	0.19	0.25	0.24	0.32	0	0.56	0.8798	0.255	0.7807	1.9695	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2003	2546	856	1252	1623	2549	1651	1347	1750	1898	1209	2353	1597	694	1228	1493	1447	2047	1815	1560	3083	983	1622	1367	3003	1679	746	1453	888	1964	1544	1540	1143	889	1722	1706	1361	1714	1117	2111	1960	706	2265	1822	1383	1084	1414	1924	1147	1103	585	797	863	1799	1598	1945	409	884	793	447	1489	459	1283	553
GCF_024166365.1	NC_064846	NC_064846.1	Elephas maximus indicus isolate mEleMax1 chromosome X; mEleMax1 primary haplotype; whole genome shotgun sequence.	53747921	53595240	36522106	36740600	811183	181417050	0.3	0.3	0.2	0.2	0	0.4	0.942	0.0044	0.9956	1.9718	477	540	1017	17033058	18681398	12361258	12655172	413	60731299	0.26	0.28	0.23	0.23	0.46	0.9192	0.1204	0.8913	1.9747	485694	383	442	825	365474	303398	342918	352043	1363833	0.27	0.23	0.24	0.26	0.5	0.8663	0.3068	0.7537	1.9453	0	11215302	12459510	7917404	8116029	13	39708258	0.26	0.3	0.21	0.23	0.44	0.8962	0.2001	0.8312	1.9476	0	71	74	145	59439	55693	45750	47289	208171	0.28	0.25	0.23	0.25	0.48	0.8728	0.2837	0.7706	1.9517	0	1314007	1443892	960990	975528	200	4694617	0.27	0.29	0.21	0.23	0.44	0.901	0.1842	0.8427	1.9609	10	9	19	284	371	337	413	1405	0.2	0.26	0.24	0.29	0	0.54	0.8788	0.2354	0.7938	1.9822	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	10930	12875	3478	6461	8205	13457	8628	6373	7722	8787	6698	12470	7904	2838	6145	7273	7187	9797	7754	6896	14145	5110	8096	7761	13938	7910	4269	6998	4679	8623	7094	6587	5491	4137	7655	7714	6663	8806	5286	10882	8738	3493	11281	8153	6534	4618	7091	9482	5374	5679	2405	3262	4016	9109	7803	10494	2138	3761	3811	2394	7795	2784	6150	2680
GCF_024166365.1	NC_064847	NC_064847.1	Elephas maximus indicus isolate mEleMax1 chromosome Y; mEleMax1 primary haplotype; whole genome shotgun sequence.	4317251	3831444	3428327	3371968	957484	15906474	0.27	0.24	0.22	0.21	0.06	0.43	0.8186	0.0679	0.9355	1.9569	12	13	25	353327	444193	240615	254077	0	1292212	0.27	0.31	0.21	0.22	0.42	0.921	0.1358	0.8786	1.9559	0	10	13	23	11580	10408	8807	9498	40293	0.3	0.26	0.2	0.23	0.44	0.8646	0.3096	0.7546	1.939	0	306940	394867	210053	221107	0	1132967	0.29	0.35	0.17	0.19	0.36	0.8927	0.2144	0.8172	1.9118	0	2	0	2	160	128	125	114	527	0.3	0.2	0.23	0.26	0.49	0.859	0.4209	0.7054	1.91	0	15246	13632	8613	9166	0	46657	0.3	0.29	0.2	0.21	0.42	0.9049	0.067	0.9355	1.9752	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	357	362	169	208	215	313	244	257	188	260	301	388	249	55	222	205	262	274	271	269	363	141	180	297	401	178	169	255	172	219	208	250	127	177	277	208	180	150	172	179	198	67	384	190	173	200	141	290	186	192	70	59	216	266	202	258	93	76	70	62	248	98	185	65