GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	fr_chromo_N Frequency of 'N' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	fr_gene_N Frequency of 'N' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_N Number of 'N' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_N Number of 'N' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_N Number of 'N' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	fr_tRNA_N Frequency of 'N' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_021613505.1	NC_060267	NC_060267.1	Equus quagga isolate Etosha38 chromosome 1; UCLA_HA_Equagga_1.0; whole genome shotgun sequence.	53301143	53511757	38963398	39001266	1397348	186174912	0.29	0.29	0.21	0.21	0.01	0.42	0.9508	0.0025	0.9975	1.9783	1121	1030	2151	25358030	28353329	19678057	20763353	202910	94355679	0.25	0.28	0.23	0.24	0	0.47	0.9221	0.12	0.8908	1.9722	11262	978	876	1854	793872	700278	863239	862528	57	3219974	0.26	0.22	0.25	0.27	0.52	0.8633	0.3038	0.7551	1.9399	1	19153522	21649469	14590685	15447059	165573	71006308	0.24	0.28	0.23	0.24	0	0.47	0.8925	0.2067	0.8244	1.9465	5720	109	119	228	75174	72259	69069	70424	286926	0.27	0.24	0.24	0.25	0	0.5	0.8743	0.2698	0.7809	1.9502	0	575948	591591	427804	435587	1160	2032090	0.26	0.29	0.22	0.23	0	0.45	0.8995	0.1824	0.8437	1.9579	2	5	7	106	126	120	167	519	0.2	0.25	0.23	0.32	0	0.55	0.8636	0.2612	0.776	1.9754	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	23831	27814	7242	14339	19437	30817	20670	13355	20054	21983	13288	22802	17157	8307	12912	16536	16537	25507	19414	15177	39066	10352	22054	15147	33966	19693	8785	15065	9537	20952	18311	15046	14066	7961	18219	19497	16492	23699	12169	28296	22714	10690	20665	22833	18310	10169	18416	20329	13439	13012	6814	10297	7847	21490	18555	22876	3872	11987	11029	5563	15871	4772	13877	6973
GCF_021613505.1	NC_060268	NC_060268.1	Equus quagga isolate Etosha38 chromosome 2; UCLA_HA_Equagga_1.0; whole genome shotgun sequence.	53657575	53791933	38307765	38283437	836778	184877488	0.29	0.29	0.21	0.21	0	0.41	0.9503	0.0016	0.9984	1.9772	885	945	1830	23650691	26512505	17664100	18680552	165527	86673375	0.25	0.28	0.23	0.23	0	0.46	0.9211	0.1223	0.8891	1.9701	4005	733	780	1513	692439	597790	695134	708758	20	2694141	0.27	0.23	0.24	0.26	0.51	0.8636	0.3065	0.7536	1.9403	0	18900479	21374548	13808079	14627401	146897	68857404	0.26	0.3	0.21	0.23	0	0.44	0.8973	0.1896	0.8369	1.9475	0	114	122	236	76933	76013	66418	69254	288618	0.27	0.25	0.24	0.25	0	0.48	0.8731	0.2625	0.7851	1.9517	0	619849	639168	439566	449450	1140	2149173	0.27	0.29	0.21	0.22	0	0.43	0.9056	0.1566	0.8637	1.9621	14	13	27	349	482	514	670	2015	0.18	0.24	0.25	0.33	0	0.58	0.8843	0.2926	0.7536	1.9573	1	1	2	52	62	78	80	272	0.19	0.23	0.29	0.3	0	0.58	0.8808	0.1491	0.862	1.9741	19680	23734	6258	12447	16268	25203	16872	12069	16210	18173	12447	22072	14760	6487	11567	13544	14376	20204	15630	13725	29836	8504	17378	14005	27061	15224	7584	13527	8458	17567	14186	13530	10865	7716	15651	15688	13399	18205	9441	21553	18039	8225	20339	17337	14706	9291	14381	18743	11479	11416	5564	8522	7850	17812	15591	19276	3774	9520	9105	4475	13985	4959	12328	5731
GCF_021613505.1	NC_060269	NC_060269.1	Equus quagga isolate Etosha38 chromosome 3; UCLA_HA_Equagga_1.0; whole genome shotgun sequence.	47311168	47080507	30132462	30124229	935950	155584316	0.3	0.3	0.19	0.19	0.01	0.39	0.9483	0.0026	0.9974	1.9614	461	464	925	16701090	18395721	11304128	11928512	174458	58503909	0.27	0.29	0.21	0.22	0	0.43	0.926	0.1033	0.9046	1.9635	0	376	381	757	377189	316875	330617	348530	21	1373232	0.28	0.24	0.23	0.25	0.48	0.8645	0.3078	0.7523	1.9391	0	13414077	14884912	8834068	9321917	158157	46613131	0.28	0.32	0.19	0.21	0	0.4	0.9027	0.1628	0.8571	1.9386	0	74	71	145	44644	42780	37938	39256	164618	0.28	0.25	0.23	0.24	0	0.47	0.8727	0.2569	0.7886	1.9522	0	538043	559128	361081	373031	100	1831383	0.28	0.3	0.21	0.22	0	0.42	0.9048	0.1602	0.8608	1.9511	0	2	2	27	35	38	46	146	0.18	0.24	0.26	0.32	0	0.58	0.8776	0.2492	0.7962	1.9571	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	10239	12866	3730	6569	8019	12186	7902	7344	7457	8838	7710	12580	7664	3139	6414	7402	7374	9456	7736	8150	13511	4391	7964	7739	13301	7072	3965	7407	4967	9173	7179	7317	5370	4817	8386	7930	6325	7649	4867	9067	8808	3521	12601	7687	7084	5462	6322	10320	6185	6205	2743	3940	4862	8138	7343	9358	2332	4092	4107	2275	8048	3266	6701	2793
GCF_021613505.1	NC_060270	NC_060270.1	Equus quagga isolate Etosha38 chromosome 4; UCLA_HA_Equagga_1.0; whole genome shotgun sequence.	43117317	43035710	27778883	27784463	614964	142331337	0.3	0.3	0.2	0.2	0	0.39	0.9499	0.001	0.999	1.9638	475	444	919	17740427	19580149	11788011	12389826	77050	61575463	0.28	0.3	0.21	0.22	0	0.42	0.9254	0.1049	0.9032	1.9651	13106	378	350	728	399330	333334	331952	347226	1	1411843	0.29	0.24	0.22	0.25	0.47	0.8654	0.3101	0.7511	1.9413	0	13529483	15069212	8876372	9319749	49159	46843975	0.28	0.32	0.19	0.2	0	0.39	0.9022	0.1644	0.8561	1.9384	0	85	83	168	47471	46072	39244	39493	172280	0.28	0.25	0.23	0.24	0	0.47	0.871	0.2616	0.7862	1.9531	0	432900	464786	292518	300150	530	1490884	0.28	0.3	0.21	0.21	0	0.42	0.9032	0.1571	0.8622	1.956	2	4	6	82	93	119	138	432	0.19	0.22	0.28	0.32	0	0.6	0.8808	0.2304	0.8022	1.9596	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	11112	13273	3890	7035	8436	11659	8172	8104	7643	9024	8351	13872	8411	3101	6934	7651	8047	9147	8117	8770	13062	4595	7938	8408	13425	7042	4269	7892	5566	9420	7277	7565	5526	5517	9123	7422	6523	7364	5214	8659	8518	3111	14097	7115	6812	5846	5867	10753	6259	6476	2579	3522	5359	8385	7315	9655	2508	3627	3685	2130	8935	3520	6959	2686
GCF_021613505.1	NC_060271	NC_060271.1	Equus quagga isolate Etosha38 chromosome 5; UCLA_HA_Equagga_1.0; whole genome shotgun sequence.	39195855	39261795	30163928	30199833	839379	139660790	0.28	0.28	0.22	0.22	0.01	0.43	0.9529	0.0014	0.9986	1.9844	765	771	1536	16964594	19081922	13810953	14624321	206107	64687897	0.25	0.27	0.24	0.25	0	0.48	0.9246	0.1065	0.9017	1.9746	180	628	650	1278	545221	465947	595779	600857	37	2207841	0.26	0.22	0.26	0.27	0.53	0.8614	0.3053	0.7544	1.9366	1	13425284	15299348	10621036	11277354	145658	50768680	0.24	0.28	0.23	0.24	0	0.47	0.8937	0.2045	0.8256	1.9456	0	119	109	228	77556	73026	75299	76469	302350	0.26	0.23	0.25	0.26	0	0.51	0.874	0.2631	0.7836	1.9563	0	531988	548231	438520	447085	17770	1983594	0.25	0.27	0.23	0.24	0	0.47	0.9022	0.1758	0.8477	1.9656	2	4	6	84	104	109	139	436	0.19	0.24	0.25	0.32	0	0.57	0.8733	0.2617	0.7773	1.9662	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	14997	19258	4761	9397	13639	21864	13950	8463	13663	15557	8551	16516	11666	6017	9211	10603	11139	16740	12383	9719	25682	7046	14282	10767	23460	13261	5818	10130	5846	14350	11293	10210	9030	5345	11945	13487	11592	16933	7825	19727	15706	8013	14661	16028	12777	6860	12736	14493	8857	8973	5007	8142	5367	14829	12799	16370	2767	9082	8773	3989	11155	3491	10033	4952
GCF_021613505.1	NC_060272	NC_060272.1	Equus quagga isolate Etosha38 chromosome 6; UCLA_HA_Equagga_1.0; whole genome shotgun sequence.	40887682	40613543	26339141	26277176	2282205	136399747	0.3	0.3	0.19	0.19	0.02	0.39	0.9486	0.0045	0.9955	1.9573	358	364	722	13411288	14965097	9179184	9717611	98630	47371810	0.27	0.29	0.21	0.22	0	0.43	0.9251	0.1068	0.9017	1.9644	3614	291	282	573	299897	248162	263009	274233	6	1085307	0.29	0.24	0.23	0.25	0.48	0.8653	0.3044	0.7547	1.9376	0	10723091	12095907	7207632	7633225	79924	37739779	0.27	0.32	0.2	0.21	0	0.41	0.904	0.1675	0.853	1.9412	0	62	76	138	44906	42927	40633	40321	168787	0.27	0.25	0.23	0.25	0	0.48	0.8773	0.2564	0.7897	1.956	0	391485	405708	274246	279929	250	1351618	0.28	0.29	0.21	0.22	0	0.43	0.9061	0.1436	0.8743	1.9577	2	3	5	63	89	95	116	363	0.17	0.25	0.26	0.32	0	0.58	0.8915	0.2775	0.7675	1.9608	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8190	10224	2912	4999	6153	9570	5913	5851	5855	6574	6168	10270	6198	2586	4860	6054	5634	7417	6435	6333	10397	3246	6305	6267	10542	5432	3181	5873	3872	6953	5788	5701	4380	3895	6638	6353	5276	6034	3984	7576	6962	3090	10560	6343	5234	4302	5108	8125	4660	4790	2235	3376	4034	6370	5508	7004	1707	3349	3644	1776	6357	2424	4980	2189
GCF_021613505.1	NC_060273	NC_060273.1	Equus quagga isolate Etosha38 chromosome 7; UCLA_HA_Equagga_1.0; whole genome shotgun sequence.	38250757	38205175	28394409	28349801	2244358	135444500	0.28	0.28	0.21	0.21	0.02	0.42	0.9534	0.0014	0.9986	1.975	766	762	1528	16341705	18286723	13158500	13841693	206839	61835460	0.24	0.26	0.24	0.25	0	0.49	0.9221	0.1113	0.8981	1.9697	24591	622	638	1260	523265	444196	597138	601689	74	2166362	0.25	0.21	0.26	0.28	0.54	0.8609	0.3091	0.752	1.9328	0	12831346	14554778	10077963	10630282	173105	48267474	0.23	0.28	0.24	0.25	0	0.49	0.8913	0.21	0.8222	1.9404	0	106	91	197	68722	66401	67316	66637	269076	0.25	0.23	0.25	0.26	0	0.52	0.8738	0.2586	0.7879	1.9518	0	423475	436936	333284	345231	11510	1550436	0.25	0.27	0.23	0.24	0.01	0.47	0.9011	0.1786	0.8467	1.9555	24	10	34	416	560	662	856	2494	0.17	0.22	0.27	0.34	0	0.61	0.8909	0.2784	0.7619	1.948	2	0	2	839	808	1495	1701	4843	0.19	0.21	0.29	0.31	0	0.6	0.9097	0.1018	0.9052	1.9554	14291	18705	4310	8837	13011	22180	13685	7491	13747	15396	8102	15171	11152	6361	8425	10286	10572	17031	12167	8639	25776	6684	14373	9811	23241	13185	5433	9257	5279	14035	11065	9426	9029	4904	11343	13710	11355	17791	7511	20297	16039	8706	13550	16316	12557	6279	13367	14175	8437	8270	5229	8738	4660	14958	13732	15973	2651	9874	9374	4235	10214	3299	9543	5146
GCF_021613505.1	NC_060274	NC_060274.1	Equus quagga isolate Etosha38 chromosome 8; UCLA_HA_Equagga_1.0; whole genome shotgun sequence.	39821918	39655721	26547160	26484729	476802	132986330	0.3	0.3	0.2	0.2	0	0.4	0.9506	0.0033	0.9967	1.9692	513	486	999	18124263	19992380	12576536	13221568	159854	64074601	0.26	0.29	0.22	0.23	0	0.44	0.923	0.1093	0.9001	1.9693	7182	406	393	799	368007	316261	356947	361456	49	1402720	0.27	0.23	0.24	0.26	0.5	0.8642	0.3053	0.7541	1.9412	0	15015112	16660410	10245867	10783206	143235	52847830	0.27	0.31	0.2	0.22	0	0.42	0.9028	0.1696	0.8526	1.9443	0	82	81	163	61923	59917	55440	55803	233083	0.26	0.24	0.24	0.25	0	0.49	0.8751	0.2452	0.7965	1.9527	0	553089	587464	399179	408537	1030	1949299	0.27	0.29	0.22	0.22	0	0.44	0.9052	0.1569	0.8632	1.959	11	8	19	290	311	334	446	1381	0.21	0.23	0.24	0.32	0	0.56	0.8809	0.2046	0.8235	1.9731	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	10250	12324	3277	6587	8399	11996	8518	6970	8339	9348	6857	11856	7818	3569	6161	7396	7400	9917	8207	7731	14794	4583	8840	7250	14051	7797	3836	7204	4827	8941	7340	7189	5906	4478	8428	7783	7164	9133	5123	10448	9406	4178	11455	8661	7435	5109	7068	10067	6097	5994	2894	4491	4328	8949	8039	9538	1790	4597	4791	2491	7871	2672	6337	2933
GCF_021613505.1	NC_060275	NC_060275.1	Equus quagga isolate Etosha38 chromosome 9; UCLA_HA_Equagga_1.0; whole genome shotgun sequence.	36016411	35962606	24064444	24070682	1084550	121198693	0.3	0.3	0.2	0.2	0.01	0.4	0.9508	0.0009	0.9991	1.9666	380	371	751	12558927	13982880	9008266	9481900	96625	45128598	0.26	0.28	0.22	0.23	0	0.45	0.9252	0.1085	0.9004	1.9656	140	299	296	595	294275	247044	289460	295318	10	1126107	0.27	0.23	0.24	0.26	0.5	0.8647	0.2992	0.758	1.9373	0	9896081	11135966	6947336	7323902	80725	35384010	0.26	0.3	0.21	0.22	0	0.43	0.8991	0.1793	0.8448	1.9367	0	64	58	122	39057	36363	31157	32230	138807	0.27	0.25	0.24	0.24	0	0.48	0.8766	0.2515	0.7944	1.9517	0	411947	435647	276287	281535	300	1405716	0.28	0.3	0.2	0.21	0	0.42	0.9064	0.1503	0.8678	1.9555	4	0	4	52	73	82	103	310	0.17	0.23	0.26	0.33	0	0.6	0.8579	0.3419	0.7182	1.9457	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8165	9896	2723	5067	6848	10136	6693	5283	6308	7298	5457	9617	6226	3103	4822	5927	5679	8073	6453	5835	11663	3488	6743	5965	11071	6127	3072	5396	3557	7421	5750	5456	4612	3484	6730	6665	5808	7426	4041	8852	7502	3955	9160	7418	5988	4150	5649	7657	4675	4884	2590	4225	3344	7047	6005	7714	1515	4275	4483	2077	6179	2210	5150	2666
GCF_021613505.1	NC_060276	NC_060276.1	Equus quagga isolate Etosha38 chromosome 10; UCLA_HA_Equagga_1.0; whole genome shotgun sequence.	36295463	36172069	23306913	23253375	3528853	122556673	0.3	0.3	0.19	0.19	0.03	0.38	0.9466	0.0029	0.9972	1.9499	354	450	804	11092036	12293210	7731306	8032777	351259	39500588	0.26	0.28	0.22	0.23	0.01	0.45	0.9226	0.1128	0.8972	1.9682	49547	294	376	670	305403	257917	290639	297274	0	1151233	0.27	0.23	0.24	0.26	0.5	0.8655	0.3061	0.754	1.9442	0	8459147	9447873	5733700	5967337	265779	29873836	0.26	0.3	0.21	0.22	0	0.44	0.8958	0.1988	0.8311	1.9416	0	50	63	113	30879	31459	25297	26055	113690	0.27	0.25	0.23	0.24	0	0.48	0.8722	0.2679	0.7801	1.9519	0	457900	501547	317648	326892	7120	1611107	0.27	0.3	0.21	0.22	0	0.43	0.9073	0.1659	0.8556	1.9595	2	0	2	27	34	39	45	145	0.19	0.23	0.27	0.31	0	0.58	0.9126	0.1862	0.8304	1.9694	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	9003	10930	2970	5480	7067	11216	7300	5540	6613	7389	5973	10074	6301	2345	5046	6037	6232	8277	6724	6020	12198	3984	7024	6752	11662	6537	3523	5947	3963	7599	6149	5719	4645	3507	6524	6492	5532	7372	4304	9105	7412	3157	9129	7204	5697	4093	5838	7873	4512	4922	2108	2922	3338	7451	6145	8704	1528	3357	3330	1957	6651	1985	5228	2410
GCF_021613505.1	NC_060277	NC_060277.1	Equus quagga isolate Etosha38 chromosome 11; UCLA_HA_Equagga_1.0; whole genome shotgun sequence.	33368831	33395790	24492063	24511418	767974	116536076	0.29	0.29	0.21	0.21	0.01	0.42	0.9503	0.0008	0.9992	1.9794	803	810	1613	14741963	16495604	11723186	12373949	211029	55545731	0.24	0.26	0.24	0.25	0	0.49	0.9218	0.1105	0.8987	1.9722	5407	659	664	1323	568808	486829	635632	639608	20	2330897	0.25	0.21	0.26	0.27	0.53	0.8627	0.3033	0.7555	1.939	0	11294696	12841623	8664200	9198912	193579	42193010	0.24	0.28	0.23	0.25	0	0.48	0.8895	0.2155	0.8178	1.9439	0	110	103	213	78373	76146	74065	74661	303245	0.26	0.24	0.24	0.26	0	0.5	0.8756	0.2532	0.791	1.9562	0	356114	365318	277567	286924	10	1285933	0.26	0.28	0.22	0.24	0	0.46	0.9008	0.177	0.8472	1.9609	17	19	36	490	603	681	877	2651	0.19	0.23	0.26	0.33	0	0.59	0.8839	0.2308	0.7983	1.9629	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	15821	20241	4848	9519	13760	24885	15351	8615	14647	16128	8729	17327	11667	6080	8993	11765	11242	17598	13474	9869	28244	7653	15854	10793	25125	14056	6055	10027	6319	15363	12799	10480	9929	5230	12106	14807	12420	18646	8507	21233	17071	8606	14514	17326	13629	7122	13937	14877	9248	9222	5178	8400	5238	15601	13398	16705	2787	9648	9087	4216	11592	3469	10348	5433
GCF_021613505.1	NC_060278	NC_060278.1	Equus quagga isolate Etosha38 chromosome 12; UCLA_HA_Equagga_1.0; whole genome shotgun sequence.	31752303	31750880	23517372	23513196	1435632	111969383	0.28	0.28	0.21	0.21	0.01	0.42	0.9514	0.0001	0.9999	1.9769	523	488	1011	13966355	15598615	10765260	11348770	102161	51781161	0.25	0.27	0.23	0.24	0	0.47	0.9244	0.1067	0.9019	1.9717	17279	421	385	806	358095	293918	377906	384891	80	1414890	0.26	0.22	0.25	0.27	0.52	0.8623	0.3094	0.7516	1.9358	0	11430017	12879086	8593080	9073093	84781	42060057	0.25	0.29	0.22	0.24	0	0.46	0.8983	0.1851	0.8404	1.9458	0	91	93	184	70614	69224	65628	67387	272853	0.26	0.24	0.24	0.26	0	0.5	0.8764	0.2495	0.7935	1.9549	0	342381	356460	263255	268173	500	1230769	0.26	0.29	0.22	0.23	0	0.45	0.9022	0.1735	0.849	1.9626	2	1	3	38	57	54	71	220	0.17	0.26	0.25	0.32	0	0.57	0.8805	0.3339	0.7155	1.9606	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	9686	13009	2914	5846	8738	14096	8771	5739	8525	9439	5918	11099	7434	4236	5883	7052	6833	10261	7644	6166	15601	4361	9052	6877	14696	8168	3548	6264	3758	9546	7049	6402	5845	3585	7884	8950	7329	10639	4871	12522	10207	5240	10329	9857	7973	4494	7945	9669	5512	5536	3470	5740	3653	9061	8612	10249	1783	5897	5875	2612	7445	2237	6070	3414
GCF_021613505.1	NC_060279	NC_060279.1	Equus quagga isolate Etosha38 chromosome 13; UCLA_HA_Equagga_1.0; whole genome shotgun sequence.	29451354	29683168	23543757	23686206	1310620	107675105	0.27	0.28	0.22	0.22	0.01	0.44	0.9516	0.0069	0.9931	1.9842	1003	1008	2011	13293817	14822431	11459491	12033967	177050	51786756	0.24	0.26	0.25	0.26	0	0.5	0.9201	0.1187	0.892	1.9734	5581	862	846	1708	643830	558585	778070	768259	175	2748919	0.24	0.21	0.27	0.28	0.55	0.86	0.308	0.7527	1.9326	0	9501446	10804807	7936557	8398002	135486	36776298	0.23	0.26	0.25	0.26	0	0.51	0.8853	0.244	0.7985	1.9387	0	83	111	194	63247	60997	60623	61318	246185	0.25	0.23	0.25	0.26	0	0.51	0.8714	0.2696	0.7806	1.9528	29	391970	399566	305633	316477	5160	1418806	0.26	0.28	0.22	0.24	0	0.47	0.9013	0.1856	0.8421	1.9607	19	20	39	477	656	782	960	2875	0.17	0.23	0.27	0.33	0	0.6	0.8792	0.2773	0.7639	1.9499	0	1	1	411	412	464	528	1815	0.23	0.23	0.26	0.29	0	0.55	0.9317	0.0657	0.9382	1.9921	19062	21793	5774	11121	16228	28435	17534	8482	18304	19636	10350	16924	14783	7899	10895	13497	13618	22810	16058	9769	34056	8670	18846	10679	28943	17801	6611	11424	5930	18273	14749	11749	11878	6225	15343	16364	14793	25029	9078	26561	20510	11261	14209	21465	16042	7139	18354	18232	10186	10193	6425	10946	6109	20592	18428	20528	2970	12722	11993	4973	12046	3174	11512	6082
GCF_021613505.1	NC_060280	NC_060280.1	Equus quagga isolate Etosha38 chromosome 14; UCLA_HA_Equagga_1.0; whole genome shotgun sequence.	27681815	27629529	20502182	20505632	1115296	97434454	0.28	0.28	0.21	0.21	0.01	0.42	0.9507	0.001	0.999	1.9777	745	708	1453	11628351	12941126	9458023	9912026	189530	44129056	0.23	0.27	0.25	0.25	0	0.5	0.9143	0.1526	0.8647	1.9621	107	643	603	1246	451701	416254	537893	514125	20	1919993	0.24	0.21	0.27	0.28	0.55	0.8598	0.3174	0.7473	1.9249	0	8863172	9941903	6932252	7311872	124500	33173699	0.22	0.26	0.25	0.26	0	0.51	0.8844	0.2246	0.8121	1.9238	0	70	80	150	41861	40165	39684	39994	161704	0.26	0.24	0.25	0.26	0	0.5	0.8704	0.2602	0.7848	1.9535	0	469274	496771	358790	371188	940	1696963	0.25	0.28	0.23	0.23	0	0.47	0.9025	0.1724	0.8518	1.9638	2	4	6	79	110	103	145	437	0.18	0.25	0.24	0.33	0	0.57	0.8826	0.3404	0.716	1.9554	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	14745	15210	3876	8353	11037	17819	12135	8268	12784	13168	6907	12019	10351	5531	7138	9266	9678	15073	12866	8946	22890	5764	14314	7867	18847	12356	5170	8288	5877	11657	12108	9103	8676	4392	10512	11167	10814	15587	7448	18507	13354	8376	10825	14252	10734	5571	11244	11180	7971	7703	4461	7935	4189	12418	10897	13383	2131	8456	7951	3763	8555	3110	7719	4493
GCF_021613505.1	NC_060281	NC_060281.1	Equus quagga isolate Etosha38 chromosome 15; UCLA_HA_Equagga_1.0; whole genome shotgun sequence.	26391754	26384917	20272091	20239410	1006748	94294920	0.28	0.28	0.21	0.21	0.01	0.43	0.9515	0.0009	0.9991	1.9816	712	742	1454	11795403	13167327	9620700	10125735	213133	44922298	0.24	0.26	0.24	0.26	0	0.5	0.9168	0.1303	0.8826	1.9735	14387	525	558	1083	411967	357090	479239	479137	87	1727520	0.25	0.21	0.26	0.28	0.54	0.8619	0.3112	0.7505	1.936	382	8815264	9997801	6994930	7401629	163466	33373090	0.23	0.28	0.24	0.25	0	0.49	0.8914	0.2181	0.8164	1.9478	0	68	79	147	48705	46176	47014	47535	189430	0.26	0.23	0.25	0.26	0	0.51	0.8777	0.2466	0.7958	1.9585	0	444041	476694	337125	350422	670	1608952	0.26	0.28	0.23	0.23	0	0.46	0.9036	0.172	0.8512	1.9668	93	85	178	2627	2999	3396	4248	13270	0.2	0.23	0.26	0.32	0	0.58	0.8865	0.2221	0.807	1.9674	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	12131	15261	3458	7149	10300	17951	11300	6362	11329	12256	6076	11888	8891	4917	6572	8189	8586	13595	9687	7084	21033	5701	12216	7419	18571	10818	4222	7517	4240	11542	9628	7622	7468	3720	9286	10439	9124	14534	5909	16239	12787	6793	10013	13139	9703	4953	10841	10670	6690	6555	4060	6672	3589	12054	10886	12548	1842	7567	7092	3202	7853	2217	7086	4002
GCF_021613505.1	NC_060282	NC_060282.1	Equus quagga isolate Etosha38 chromosome 16; UCLA_HA_Equagga_1.0; whole genome shotgun sequence.	24964000	25065976	16539385	16594336	295044	83458741	0.3	0.3	0.2	0.2	0	0.4	0.9499	0.0037	0.9963	1.9681	270	256	526	9227911	10227266	6410352	6760086	46120	32671735	0.26	0.28	0.22	0.23	0	0.46	0.9231	0.1022	0.9058	1.9605	1737	213	194	407	188724	161473	185136	192422	3	727758	0.27	0.23	0.24	0.26	0.5	0.8631	0.2945	0.7612	1.9364	0	6923124	7734902	4677363	4942361	22877	24300627	0.26	0.3	0.21	0.22	0	0.44	0.8948	0.1833	0.8425	1.929	0	47	52	99	32343	31389	27393	28175	119300	0.27	0.25	0.23	0.25	0	0.48	0.8742	0.254	0.7902	1.9545	0	572840	616619	405252	409904	5660	2010275	0.27	0.3	0.21	0.22	0	0.43	0.9091	0.1387	0.8777	1.9628	7	3	10	150	172	182	233	737	0.2	0.24	0.24	0.32	0	0.56	0.8821	0.2333	0.7998	1.9722	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5351	6406	1778	3196	4402	6810	4471	3534	4075	4796	3568	5956	3856	1917	3143	3679	3557	5528	4097	3879	8125	2328	4362	3619	7542	3836	1995	3698	2324	4742	3838	3639	2760	2274	4240	4166	3586	4689	2613	5707	4912	2472	5710	4850	3979	2564	3714	5103	3067	2961	1560	2670	2368	4656	3992	4985	1090	2751	2558	1268	3814	1507	3169	1571
GCF_021613505.1	NC_060283	NC_060283.1	Equus quagga isolate Etosha38 chromosome 17; UCLA_HA_Equagga_1.0; whole genome shotgun sequence.	16367542	16315637	13026901	13001631	470428	59182139	0.28	0.28	0.22	0.22	0.01	0.44	0.9508	0.0026	0.9974	1.9863	490	548	1038	6478000	7237976	5877119	6148108	138174	25879377	0.23	0.26	0.26	0.25	0	0.51	0.9148	0.1369	0.877	1.9674	31	416	467	883	300607	283909	391510	377004	42	1353072	0.23	0.2	0.28	0.28	0.56	0.8601	0.3103	0.751	1.9301	0	4911692	5521869	4262922	4492772	74822	19264077	0.21	0.25	0.26	0.27	0	0.53	0.8825	0.2316	0.8065	1.9353	0	53	58	111	34228	33267	35837	36985	140317	0.25	0.23	0.26	0.27	0	0.52	0.8734	0.265	0.7822	1.9548	38	175521	182695	149152	151569	6000	664937	0.24	0.26	0.24	0.25	0	0.49	0.8967	0.1927	0.835	1.9617	5	4	9	146	168	156	206	676	0.22	0.25	0.23	0.31	0	0.54	0.877	0.2239	0.8049	1.9819	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	9635	10434	2501	5555	8068	13631	9008	4852	9106	9547	4259	7315	6394	4209	4720	6283	6562	11598	8926	5837	18077	4424	10427	5401	13630	8837	3332	5695	3529	8485	8130	5791	6380	2463	6747	8824	7490	12235	5226	14007	9822	5884	6342	11120	8426	3715	8967	7072	5423	4954	3166	5473	2392	9575	8042	10089	1199	6480	5889	2556	5591	1261	4842	3089
GCF_021613505.1	NC_060284	NC_060284.1	Equus quagga isolate Etosha38 chromosome 18; UCLA_HA_Equagga_1.0; whole genome shotgun sequence.	15152318	15159750	9911293	9932361	93185	50248907	0.3	0.3	0.2	0.2	0	0.39	0.9499	0.0013	0.9987	1.9674	200	174	374	6073848	6716048	4069912	4306702	28368	21194878	0.28	0.3	0.21	0.22	0	0.42	0.927	0.0983	0.9088	1.9642	5521	161	147	308	154817	129430	127867	136409	0	548523	0.29	0.24	0.22	0.25	0.47	0.8652	0.3107	0.7503	1.9395	0	4852702	5417977	3182792	3371781	27118	16852370	0.28	0.33	0.19	0.2	0	0.39	0.8999	0.1751	0.8476	1.934	0	37	23	60	20379	19433	15690	16756	72258	0.28	0.25	0.23	0.25	0	0.48	0.8711	0.2631	0.7845	1.9497	0	165324	175489	121344	123067	10	585234	0.28	0.3	0.21	0.22	0	0.42	0.9052	0.1355	0.8797	1.9611	1	0	1	13	17	18	25	73	0.18	0.23	0.25	0.34	0	0.59	0.8287	0.2963	0.7425	1.9586	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4323	5287	1498	2726	3267	4456	3093	3193	2843	3546	3197	5385	3075	1128	2564	2970	2970	3649	3206	3410	5319	1963	3177	3348	5082	2793	1722	3017	2127	3740	2966	3040	2085	2075	3476	2957	2383	2904	2060	3212	3321	1190	5541	2889	2606	2259	2521	4247	2405	2356	1002	1317	2099	3209	2798	3576	966	1541	1404	835	3387	1449	2685	1075
GCF_021613505.1	NC_060285	NC_060285.1	Equus quagga isolate Etosha38 chromosome 19; UCLA_HA_Equagga_1.0; whole genome shotgun sequence.	13088167	13063635	9671679	9664847	341469	45829797	0.29	0.29	0.21	0.21	0.01	0.42	0.952	0.0013	0.9987	1.9797	227	220	447	5547511	6177994	4420473	4668148	53360	20867486	0.24	0.27	0.24	0.25	0	0.48	0.9245	0.1019	0.9055	1.9702	1426	180	174	354	157060	130444	160746	163344	30	611624	0.27	0.22	0.25	0.26	0.51	0.8619	0.3044	0.7549	1.9345	0	4344896	4896570	3372835	3575016	28960	16218277	0.25	0.29	0.22	0.24	0	0.46	0.8962	0.1841	0.8409	1.939	0	43	38	81	34622	33571	33507	33630	135330	0.26	0.24	0.24	0.26	0	0.5	0.8828	0.234	0.8027	1.9649	0	183675	195060	141415	142470	10	662630	0.26	0.28	0.23	0.23	0	0.46	0.9049	0.1664	0.8556	1.9669	0	3	3	37	47	60	72	216	0.17	0.22	0.28	0.33	0	0.61	0.8887	0.2098	0.816	1.9539	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4319	5517	1379	2636	3746	5754	3823	2653	3514	4050	2791	5105	3131	1829	2524	3172	3076	4438	3482	2857	6821	1898	3793	3012	6288	3432	1636	2706	1739	4029	3050	2910	2450	1630	3453	3767	3047	4343	2278	5104	4171	2288	4719	4316	3364	2024	3233	4127	2429	2523	1464	2244	1730	3850	3367	4324	798	2400	2446	1105	3359	1080	2772	1434
GCF_021613505.1	NC_060286	NC_060286.1	Equus quagga isolate Etosha38 chromosome 20; UCLA_HA_Equagga_1.0; whole genome shotgun sequence.	12889052	12988180	9769932	9825313	266929	45739406	0.28	0.28	0.21	0.21	0.01	0.43	0.9494	0.0067	0.9934	1.983	299	209	508	6043978	6832415	4681648	4982298	53077	22593416	0.25	0.28	0.22	0.24	0	0.46	0.9225	0.1164	0.8938	1.9681	14373	188	173	361	168631	139267	170649	176252	0	654799	0.27	0.22	0.24	0.26	0.5	0.8631	0.3125	0.7498	1.9361	0	4800238	5471996	3640146	3874446	44867	17831693	0.25	0.3	0.21	0.23	0	0.45	0.8993	0.1801	0.8434	1.9447	0	105	32	137	35743	35177	33349	34370	138639	0.26	0.25	0.23	0.26	0	0.49	0.875	0.2439	0.7972	1.9616	23	179719	186697	137820	147236	110	651582	0.27	0.29	0.2	0.23	0	0.44	0.8968	0.1997	0.8311	1.9503	1	1	2	24	31	40	52	147	0.16	0.21	0.27	0.35	0	0.63	0.9015	0.2596	0.7711	1.9402	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4480	5928	1463	2829	3902	6920	3937	2761	3795	4404	2863	5758	3526	1901	2780	3326	3366	4762	3539	3038	7453	1968	4029	3498	6882	3705	1679	3094	1903	3984	3248	3079	2619	1753	3570	4051	3301	4432	2288	5541	4648	2385	4926	4410	3516	2166	3366	4647	2632	2657	1457	2380	1854	4227	3975	4693	820	2558	2463	1169	3466	1044	2865	1484
GCF_021613505.1	NC_060287	NC_060287.1	Equus quagga isolate Etosha38 chromosome 21; UCLA_HA_Equagga_1.0; whole genome shotgun sequence.	12336504	12348800	8101124	8098704	364147	41249279	0.3	0.3	0.2	0.2	0.01	0.39	0.9445	0.0006	0.9994	1.964	132	120	252	3169049	3506560	2373984	2499600	134637	11683830	0.25	0.28	0.23	0.23	0.01	0.46	0.9226	0.1256	0.8868	1.9672	0	96	95	191	85358	71592	85584	88067	22	330623	0.26	0.22	0.25	0.27	0.52	0.864	0.3121	0.7495	1.933	0	2455757	2736141	1776237	1876003	102935	8947073	0.25	0.29	0.22	0.23	0	0.45	0.9017	0.1725	0.8492	1.9459	0	35	22	57	20201	20164	18897	19209	78471	0.27	0.25	0.24	0.24	0	0.49	0.8756	0.2388	0.8	1.9579	0	179969	191946	126156	130459	100	628630	0.27	0.3	0.21	0.22	0	0.43	0.9016	0.1669	0.8563	1.9547	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2318	2933	716	1430	1956	2992	1828	1384	2096	2259	1421	2603	1873	1082	1525	1696	1780	2340	1802	1595	3530	985	1994	1465	3394	1936	833	1553	958	2369	1658	1461	1356	875	1926	1934	1630	2253	1206	2436	2470	1059	2626	2109	2198	1113	1742	2408	1619	1279	804	1204	987	1977	1930	2383	515	1212	1296	662	1713	616	1610	730
GCF_021613505.1	NC_060288	NC_060288.1	Equus quagga isolate Etosha38 chromosome 22; UCLA_HA_Equagga_1.0; whole genome shotgun sequence.	11567941	11526523	7543491	7507954	284331	38430240	0.3	0.3	0.2	0.2	0.01	0.39	0.9485	0.0042	0.9959	1.9638	112	110	222	4150177	4557758	2817164	2969320	31074	14525493	0.27	0.3	0.21	0.22	0	0.43	0.9275	0.0941	0.9122	1.9697	0	86	89	175	88694	74841	77953	81624	0	323112	0.28	0.24	0.23	0.25	0.48	0.8674	0.2966	0.7606	1.9442	0	3241005	3580924	2143352	2257086	29124	11251491	0.28	0.32	0.2	0.21	0	0.4	0.9053	0.1576	0.8614	1.9469	0	25	19	44	16168	15271	13182	13381	58002	0.28	0.25	0.23	0.24	0	0.48	0.8779	0.2519	0.7909	1.9581	0	198818	210847	134400	137230	520	681815	0.28	0.3	0.21	0.22	0	0.42	0.9063	0.1631	0.8583	1.9599	0	1	1	14	17	19	22	72	0.19	0.24	0.26	0.31	0	0.57	0.887	0.1699	0.8436	1.9809	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2418	2876	877	1588	1887	2699	1817	1659	1753	2146	1787	2880	1900	786	1535	1740	1768	2196	1792	1873	3242	1028	1926	1798	3088	1709	988	1711	1170	2129	1625	1725	1326	1223	2055	1739	1537	1738	1159	2167	1946	853	3088	1756	1612	1251	1547	2402	1510	1442	680	924	1141	1891	1717	2165	591	997	1008	548	1839	795	1733	658
NA	NC_044858	NC_044858.1	Equus burchellii quagga isolate QUAGGA mitochondrion; complete genome.	5319	4265	4666	2156	200	16606	0.32	0.26	0.28	0.13	0.01	0.41	0.9277	0.4779	0.632	1.9268	28	9	37	4879	4172	4203	2213	0	15467	0.32	0.29	0.22	0.17	0	0.39	0.8791	0.3999	0.6887	1.915	51	6	1	7	1449	1472	1370	788	0	5079	0.3	0.29	0.26	0.15	0.41	0.8837	0.549	0.6072	1.8996	43	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	14	8	22	494	455	272	297	1518	0.33	0.3	0.18	0.2	0	0.37	0.8709	0.3101	0.7397	1.9196	2	0	2	940	601	582	429	2552	0.37	0.23	0.23	0.17	0	0.4	0.9073	0.3789	0.6837	1.9406	24	5	43	25	32	12	28	78	25	5	15	34	41	8	8	43	24	16	71	38	16	23	49	17	4	37	107	14	27	50	76	30	29	71	56	26	42	24	31	39	14	5	32	31	10	25	16	1	1	11	10	3	30	26	0	33	0	2	3	7	31	6	39	14