GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	fr_chromo_N Frequency of 'N' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	fr_gene_N Frequency of 'N' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_N Number of 'N' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_N Number of 'N' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_N Number of 'N' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_028533385.1	NC_083295	NC_083295.1	Panthera onca isolate Sample0147 chromosome 1; Panthera_onca_HiC; whole genome shotgun sequence.	33092199	33129170	22475913	22495323	1044700	112237305	0.29	0.3	0.2	0.2	0.01	0.4	0.9469	0.001	0.999	1.9685	525	450	975	12709906	13949277	9199782	9510633	325500	45695098	0.26	0.28	0.22	0.23	0.01	0.46	0.9202	0.1167	0.895	1.97	180469	361	302	663	283107	238189	275790	281472	13	1078571	0.27	0.23	0.24	0.26	0.5	0.8659	0.3052	0.7543	1.9449	0	8068145	8985889	5783911	5998914	220987	29057846	0.25	0.29	0.22	0.23	0.01	0.45	0.8957	0.1984	0.8319	1.9424	126	111	237	139015	145546	109618	112490	506669	0.27	0.25	0.23	0.24	0	0.47	0.8811	0.2377	0.8016	1.9588	0	1523291	1649992	1062591	1087687	37000	5360561	0.27	0.29	0.21	0.22	0.01	0.43	0.9032	0.1704	0.8553	1.9532	0	17	14	31	312	645	658	853	2468	0.13	0.26	0.27	0.35	0.61	0.8644	0.486	0.6297	1.9078	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8306	10038	2767	4918	6465	10336	6480	5019	6249	6891	5355	9497	5835	2481	4605	5737	5771	7826	6198	5506	11348	3825	6478	6238	10838	6282	3218	5315	3549	7294	5815	5217	4476	3206	6011	6257	5191	7195	4068	8842	6875	3114	8359	6844	5306	3762	5656	7303	4207	4496	2160	2991	3035	7200	5870	7960	1477	3548	3760	1999	6005	1878	4720	2424
GCF_028533385.1	NC_083296	NC_083296.1	Panthera onca isolate Sample0147 chromosome 2; Panthera_onca_HiC; whole genome shotgun sequence.	37427968	37383805	28003898	27970562	919400	131705633	0.28	0.28	0.21	0.21	0.01	0.42	0.9507	0.0012	0.9988	1.9812	866	825	1691	18531882	20238714	14398992	15114700	388000	68672288	0.26	0.27	0.23	0.24	0	0.47	0.9235	0.1023	0.9062	1.9742	66787	566	530	1096	452486	381423	478072	488246	43	1800270	0.26	0.22	0.25	0.27	0.52	0.8629	0.3066	0.7534	1.9372	0	12235739	13632420	9316871	9856999	277157	45319186	0.25	0.29	0.22	0.24	0	0.46	0.8961	0.1916	0.8359	1.946	273	283	556	346063	344989	299786	307852	1298690	0.27	0.24	0.24	0.25	0	0.49	0.8796	0.2545	0.7903	1.9578	0	2138953	2232081	1554527	1593856	45500	7564917	0.26	0.28	0.22	0.23	0.01	0.45	0.9019	0.1637	0.8593	1.9617	0	12	5	17	191	339	359	457	1346	0.15	0.25	0.26	0.34	0.6	0.8658	0.3959	0.6889	1.9308	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	12186	16224	3994	7539	10800	17124	11004	7213	10684	12300	7316	14053	9378	5056	7404	9118	8701	13207	10079	8496	19762	5990	11327	8882	18089	10590	4693	8239	5079	12017	9297	8437	7195	4744	10035	11102	9209	13692	6411	15741	12777	6518	12695	12937	10080	6039	10345	12269	7414	7194	4103	6957	4694	11554	10853	12749	2414	7443	7496	3313	9182	3205	8212	4095
GCF_028533385.1	NC_083297	NC_083297.1	Panthera onca isolate Sample0147 chromosome 3; Panthera_onca_HiC; whole genome shotgun sequence.	45098990	45028998	32652799	32637160	1152100	156570047	0.29	0.29	0.21	0.21	0.01	0.42	0.9527	0.001	0.999	1.9775	1069	1097	2166	25614438	27935375	19528326	20407453	570200	94055792	0.24	0.26	0.24	0.25	0	0.49	0.9205	0.1063	0.9028	1.9683	46716	727	797	1524	603531	523523	725912	716736	297	2569999	0.25	0.21	0.27	0.28	0.54	0.8611	0.3084	0.7527	1.9316	0	17356202	19266090	13128725	13845602	419903	64016522	0.23	0.26	0.25	0.26	0.01	0.5	0.8885	0.21	0.823	1.9341	302	270	572	390161	397008	323358	334852	1445379	0.27	0.25	0.24	0.24	0	0.48	0.8793	0.2542	0.7906	1.9537	0	2886801	3022324	1966474	2003490	61400	9940489	0.27	0.29	0.22	0.22	0	0.44	0.9015	0.1591	0.8633	1.9542	0	18	21	39	501	713	748	990	2952	0.17	0.24	0.25	0.33	0.59	0.876	0.3227	0.742	1.9459	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	16744	20980	5116	10499	15317	24653	16032	8791	16255	18177	8852	17230	12978	8177	9574	12328	11874	20467	14373	10715	30987	8887	16987	11053	26578	16361	6312	10335	6460	16642	13239	11170	11159	5562	13997	15972	14210	22402	9362	25572	18469	11133	14852	20644	15013	7326	16554	15458	10132	9864	6238	11491	5235	17746	15437	19011	2602	12650	12461	5440	12047	3385	10392	6245
GCF_028533385.1	NC_083298	NC_083298.1	Panthera onca isolate Sample0147 chromosome 4; Panthera_onca_HiC; whole genome shotgun sequence.	67826009	67501150	44651848	44652899	1551100	226183006	0.3	0.3	0.2	0.2	0.01	0.39	0.9505	0.0024	0.9976	1.9659	1044	1032	2076	30883737	33510764	21355160	22375039	625600	108750300	0.27	0.29	0.21	0.22	0	0.43	0.922	0.1073	0.9024	1.967	316088	622	611	1233	576651	485759	528128	543846	134	2134518	0.28	0.23	0.23	0.25	0.48	0.8652	0.3097	0.7513	1.939	0	18932591	20871934	13078043	13760877	405766	67049211	0.27	0.31	0.2	0.22	0.01	0.42	0.9008	0.1682	0.8532	1.9419	398	393	791	519008	527454	390296	410194	1846952	0.29	0.25	0.22	0.23	0	0.46	0.8773	0.2607	0.7858	1.9523	0	5101663	5402674	3299815	3404416	104900	17313468	0.28	0.3	0.2	0.21	0	0.41	0.906	0.1434	0.8748	1.9538	0	20	12	32	357	626	656	835	2474	0.14	0.25	0.27	0.34	0.6	0.8647	0.405	0.6857	1.9259	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	15869	19562	5609	9971	12558	18268	12022	10783	12414	13672	11304	18537	11870	5101	9598	11430	11359	15012	12832	12081	20799	6818	12393	11713	20760	11838	6299	10989	7703	13910	11597	10841	8435	7355	13206	12530	10397	12918	8102	15340	13542	5796	19023	12773	10758	8091	10341	15706	9484	9161	4328	6480	7100	12991	11949	14636	3482	6864	7133	3475	11635	4870	10354	4275
GCF_028533385.1	NC_083299	NC_083299.1	Panthera onca isolate Sample0147 chromosome 5; Panthera_onca_HiC; whole genome shotgun sequence.	45148276	45460953	29643188	29726580	936400	150915397	0.3	0.3	0.2	0.2	0.01	0.39	0.9486	0.0049	0.9952	1.9652	710	737	1447	22661072	24512740	15509351	16188499	433800	79305462	0.27	0.29	0.21	0.22	0	0.43	0.922	0.1086	0.9014	1.9645	113134	438	447	885	397742	337543	363769	376288	2	1475344	0.28	0.23	0.23	0.25	0.49	0.8645	0.3085	0.752	1.9386	0	14024634	15454288	9575672	10023426	279998	49358018	0.27	0.31	0.2	0.22	0	0.42	0.9009	0.1678	0.8536	1.9406	257	271	528	308893	311303	239975	248574	1108745	0.29	0.25	0.23	0.23	0	0.46	0.8775	0.2565	0.7883	1.9532	82	3187945	3305508	2044481	2096824	61400	10696158	0.28	0.3	0.21	0.21	0	0.42	0.9039	0.144	0.8741	1.9517	0	9	10	19	238	382	362	476	1458	0.17	0.26	0.25	0.33	0.57	0.8728	0.3777	0.698	1.9465	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	10968	13012	3850	6692	8815	12672	8416	7428	8477	9800	7642	13253	8429	3573	6604	7762	7924	9995	8759	8414	14895	4804	8658	7687	14480	7874	4270	7818	5338	10078	7606	7736	5804	5039	8921	8093	7103	8971	5467	10154	9367	3800	13180	8761	8217	5600	7089	10952	6699	6506	2897	4199	5002	8971	8019	10156	2529	4810	4791	2486	8673	3317	7045	2968
GCF_028533385.1	NC_083300	NC_083300.1	Panthera onca isolate Sample0147 chromosome 6; Panthera_onca_HiC; whole genome shotgun sequence.	22840894	22737306	17354024	17358444	645600	80936268	0.28	0.28	0.21	0.21	0.01	0.43	0.9525	0.0024	0.9976	1.9824	467	496	963	12021662	13224796	9406965	9905462	305400	44864285	0.26	0.27	0.23	0.24	0.01	0.47	0.9238	0.1022	0.9063	1.9735	7441	294	321	615	278015	233223	284248	290102	17	1085605	0.27	0.22	0.25	0.26	0.51	0.8655	0.2997	0.7584	1.9411	0	8881482	9897454	6795333	7201479	243583	33019331	0.25	0.29	0.22	0.23	0.01	0.45	0.9008	0.1744	0.8488	1.9508	162	163	325	255517	265671	214538	221953	957679	0.27	0.24	0.24	0.25	0	0.49	0.8828	0.2415	0.7989	1.9602	0	982824	1038196	749807	758872	23300	3552999	0.26	0.28	0.22	0.23	0	0.45	0.8991	0.1735	0.8521	1.9612	0	4	6	10	112	211	226	275	824	0.14	0.26	0.27	0.33	0.61	0.8622	0.4015	0.6945	1.9213	0	1	1	25	30	29	35	119	0.21	0.25	0.24	0.29	0	0.54	0.8809	0.1847	0.831	1.9897	7450	9435	2484	4625	6383	9888	6546	4680	6493	7391	4777	8957	5595	3219	4418	5637	5540	7834	6009	5220	11567	3567	6641	5284	10677	6172	3028	5267	3158	7191	5621	5132	4449	3010	6305	6519	5508	7802	3982	9098	7340	3476	8451	7428	5867	3681	6240	7619	4492	4396	2460	4021	3033	7102	6305	7814	1592	4460	4394	2024	5734	2059	4908	2583
GCF_028533385.1	NC_083301	NC_083301.1	Panthera onca isolate Sample0147 chromosome 7; Panthera_onca_HiC; whole genome shotgun sequence.	18358613	18296369	13565949	13561621	471500	64254052	0.29	0.28	0.21	0.21	0.01	0.42	0.9508	0.0019	0.9981	1.9798	492	506	998	10036042	10904664	7710711	8106867	230800	36989084	0.25	0.26	0.24	0.25	0.01	0.48	0.9217	0.1041	0.9046	1.9707	23163	324	321	645	264670	224177	289415	291075	9	1069346	0.26	0.22	0.26	0.27	0.52	0.8634	0.3033	0.7553	1.939	0	6553244	7268435	4995609	5276591	167391	24261270	0.24	0.28	0.23	0.24	0.01	0.48	0.8961	0.1914	0.8363	1.9406	152	166	318	205129	205892	169425	176490	756936	0.27	0.24	0.24	0.25	0	0.48	0.8822	0.2421	0.799	1.9583	0	1147393	1200703	806527	838262	27500	4020385	0.27	0.28	0.22	0.23	0	0.45	0.902	0.164	0.8595	1.9594	0	11	7	18	202	340	360	479	1381	0.15	0.24	0.26	0.35	0.61	0.8713	0.3916	0.6861	1.9318	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	7356	9380	2458	4452	6054	10263	6538	4108	6940	7484	4123	7824	5885	3313	4353	5374	5380	7685	6103	4500	11888	3400	7062	4714	11109	6581	3023	4754	2758	7063	5475	4850	4732	2668	5996	6222	5326	8552	3656	9583	7288	3642	7228	7340	5840	3232	6659	7313	4345	4084	2574	4030	2760	7066	6795	7654	1490	4825	4822	2091	5394	1721	4915	2582
GCF_028533385.1	NC_083302	NC_083302.1	Panthera onca isolate Sample0147 chromosome 8; Panthera_onca_HiC; whole genome shotgun sequence.	14439926	14499442	12844478	12858407	476800	55119053	0.26	0.26	0.23	0.23	0.01	0.47	0.9531	0.0026	0.9974	1.9926	747	686	1433	9305219	10124480	8572136	8936532	257100	37195467	0.23	0.25	0.26	0.26	0.01	0.52	0.9193	0.1044	0.9041	1.9722	8888	532	502	1034	387361	330204	491280	484093	220	1693158	0.24	0.2	0.27	0.28	0.56	0.8618	0.3042	0.755	1.9343	1	5874377	6605339	5306316	5592034	192180	23570246	0.21	0.25	0.26	0.27	0.01	0.53	0.8834	0.2267	0.8097	1.931	176	158	334	191150	193961	178745	181713	745569	0.25	0.23	0.26	0.26	0	0.51	0.8792	0.2489	0.7941	1.9544	823	922742	938074	736849	753439	19300	3370404	0.25	0.26	0.24	0.25	0	0.49	0.9005	0.1801	0.8465	1.9639	6103	26	21	47	623	835	889	1156	3503	0.18	0.24	0.25	0.33	0.58	0.883	0.2763	0.7678	1.9567	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	10449	14155	3163	6024	9788	18783	10871	4793	11240	11995	4825	10933	8005	5614	5806	8251	7710	13135	9417	5931	21391	5642	11958	6745	18096	11202	4045	6218	3543	11173	9171	6960	7460	3066	8239	11580	9486	16140	6229	17719	12858	7425	8478	14284	10132	4417	11569	9815	6222	6015	4382	7498	2930	11571	10295	12418	1678	9041	8735	3534	7644	1937	6880	4556
GCF_028533385.1	NC_083303	NC_083303.1	Panthera onca isolate Sample0147 chromosome 9; Panthera_onca_HiC; whole genome shotgun sequence.	9463671	9476299	8818670	8844454	326500	36929594	0.26	0.26	0.24	0.24	0.01	0.48	0.9524	0.0021	0.9979	1.9941	462	460	922	5970544	6611886	5808278	6064012	160600	24615320	0.22	0.24	0.26	0.27	0.01	0.53	0.9196	0.1145	0.8962	1.9701	22094	313	323	636	225241	196068	307937	302861	27	1032134	0.23	0.2	0.28	0.29	0.57	0.8594	0.3041	0.7551	1.9291	0	4055154	4627451	3882515	4105349	115273	16785742	0.2	0.24	0.27	0.28	0.01	0.55	0.8828	0.2403	0.8003	1.9306	121	116	237	145158	148471	145874	149619	589122	0.25	0.22	0.26	0.26	0	0.52	0.8827	0.2393	0.8008	1.9574	0	523628	552350	458765	462375	11700	2008818	0.25	0.26	0.24	0.25	0	0.49	0.894	0.1846	0.844	1.9598	0	21	10	31	342	546	634	821	2343	0.14	0.23	0.27	0.35	0.62	0.8764	0.3761	0.7016	1.9209	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5775	7873	1655	3726	6114	11129	6748	2524	7043	7753	2624	5872	5025	3752	3487	4546	4940	8359	5572	3253	13025	3386	7238	3559	11088	6784	2318	3625	1676	6974	4951	4095	4552	1531	4932	6677	5858	10368	3444	11234	8208	5146	4573	9076	6492	2533	7609	6194	3850	3429	2865	5279	1514	7693	6883	7904	939	6301	6083	2482	4131	1093	4117	2781
GCF_028533385.1	NC_083304	NC_083304.1	Panthera onca isolate Sample0147 chromosome 10; Panthera_onca_HiC; whole genome shotgun sequence.	14914366	14805695	12616877	12585792	490100	55412830	0.27	0.27	0.23	0.23	0.01	0.45	0.9535	0.0049	0.9951	1.9902	677	687	1364	8119096	8821983	7533802	7831650	225300	32531831	0.23	0.25	0.25	0.26	0.01	0.51	0.9197	0.1096	0.8999	1.9737	98561	500	505	1005	354271	306962	465992	458090	48	1585363	0.23	0.2	0.28	0.29	0.57	0.8593	0.3026	0.7566	1.9296	0	4681763	5249702	4309086	4544030	137852	18922433	0.21	0.24	0.26	0.28	0.01	0.54	0.8823	0.2542	0.7917	1.9336	150	162	312	174838	172480	158486	163126	668930	0.26	0.23	0.25	0.26	0	0.51	0.8771	0.2657	0.7826	1.9524	0	1053049	1107188	899661	918544	24600	4003042	0.25	0.27	0.24	0.24	0	0.47	0.8988	0.1886	0.8411	1.9605	0	10	8	18	220	338	370	462	1390	0.16	0.24	0.26	0.33	0.6	0.8756	0.32	0.7342	1.9477	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	9946	11993	3250	5932	9242	16712	9964	4064	10525	11387	5185	9048	7769	5529	5918	7793	7050	13686	8961	5035	19661	4988	10656	5593	15958	10569	3430	6023	2863	10234	8001	6415	6896	3261	8299	9994	9257	16018	5293	17022	11893	7775	7108	13626	9666	3794	11596	10243	5690	5317	4072	7849	3189	12244	11052	11630	1508	8697	8851	3403	6062	1532	6142	3706
GCF_028533385.1	NC_083305	NC_083305.1	Panthera onca isolate Sample0147 chromosome 11; Panthera_onca_HiC; whole genome shotgun sequence.	58515110	58525554	37281414	37315217	1385000	193022295	0.3	0.3	0.19	0.19	0.01	0.39	0.9488	0.0005	0.9995	1.9605	784	811	1595	25629688	27764828	17135813	17957515	533600	89021444	0.28	0.29	0.21	0.22	0	0.42	0.9226	0.1007	0.9078	1.9615	566	481	493	974	457764	382991	400351	419843	74	1661023	0.29	0.24	0.23	0.25	0.47	0.8645	0.3074	0.7533	1.9391	0	17742536	19462505	11820040	12403422	391326	61819829	0.28	0.31	0.2	0.21	0.01	0.41	0.9027	0.1576	0.8615	1.9373	289	304	593	402895	411301	286623	299882	1400701	0.29	0.26	0.22	0.23	0	0.45	0.8788	0.2573	0.7886	1.9516	0	2700694	2775519	1698053	1737588	53700	8965554	0.29	0.3	0.2	0.21	0.01	0.41	0.9018	0.1543	0.8671	1.9454	0	5	11	16	185	342	333	423	1283	0.15	0.27	0.26	0.33	0.59	0.8684	0.4231	0.6726	1.9312	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	12182	15224	4705	7880	9631	14265	9211	8982	9129	10553	9319	15352	9315	3922	7717	9002	9056	11381	9309	9910	15793	5432	9403	9331	15702	8687	4999	8905	6183	11202	8342	8962	6287	6111	10261	9516	7924	9513	6015	11072	10425	4129	15553	9265	8279	6529	7862	12492	7601	7565	3215	4837	5984	9675	8887	11247	2882	5238	5341	2828	9884	4028	7933	3459
GCF_028533385.1	NC_083306	NC_083306.1	Panthera onca isolate Sample0147 chromosome 12; Panthera_onca_HiC; whole genome shotgun sequence.	38731284	38657117	27129238	27103893	1006200	132627732	0.29	0.29	0.2	0.2	0.01	0.41	0.9509	0.0014	0.9986	1.9735	899	891	1790	20528766	22326532	14888926	15604759	487800	73836783	0.26	0.28	0.22	0.23	0.01	0.45	0.9225	0.1042	0.9046	1.969	279923	604	580	1184	501214	430818	505757	511457	46	1949292	0.27	0.23	0.24	0.26	0.5	0.8636	0.3108	0.7504	1.9386	0	13537954	14997329	9678643	10196490	349954	48760370	0.25	0.29	0.22	0.23	0.01	0.45	0.8945	0.198	0.8314	1.9392	272	291	563	370678	372425	292119	305179	1340401	0.28	0.25	0.23	0.24	0	0.47	0.8794	0.2492	0.794	1.9561	0	2038305	2084475	1394040	1421004	44500	6982324	0.28	0.29	0.21	0.22	0	0.43	0.9026	0.1577	0.8645	1.9538	0	6	9	15	166	305	307	398	1176	0.14	0.26	0.26	0.34	0.6	0.8728	0.423	0.6718	1.9272	1	0	1	30	24	32	33	119	0.25	0.2	0.27	0.28	0	0.55	0.8617	0.1265	0.8848	1.9897	14284	17362	4929	8804	11422	18002	11763	8925	11586	12816	9080	15619	10396	4876	8097	10490	10262	14289	11428	10094	21644	6460	12641	9722	19694	11170	5780	9575	6428	12785	10570	9427	8017	5783	10988	11415	9771	13971	7453	15795	12905	5930	14802	13038	10269	6665	10679	12939	8217	7976	4040	6125	5576	12303	10852	13621	2671	7373	6765	3235	10551	3555	8509	4186
GCF_028533385.1	NC_083307	NC_083307.1	Panthera onca isolate Sample0147 chromosome 13; Panthera_onca_HiC; whole genome shotgun sequence.	30031577	30291631	22237480	22344990	822100	105727778	0.28	0.29	0.21	0.21	0.01	0.42	0.9499	0.0067	0.9933	1.9794	938	874	1812	15630642	16952162	12363963	12891394	365100	58203261	0.24	0.27	0.24	0.24	0.01	0.48	0.9173	0.1324	0.8815	1.9684	18536	688	623	1311	457840	427194	540139	519390	273	1944836	0.25	0.22	0.27	0.27	0.54	0.8628	0.3074	0.7528	1.9366	0	9927778	10923260	7597573	8003070	257627	36709308	0.23	0.27	0.24	0.26	0.01	0.5	0.8888	0.214	0.8197	1.9342	231	220	451	250865	254036	212581	221693	939175	0.27	0.24	0.24	0.25	0	0.49	0.8772	0.2606	0.7866	1.9544	0	1769085	1888824	1361182	1401267	36000	6456358	0.26	0.28	0.22	0.23	0	0.46	0.9003	0.1864	0.8431	1.9587	0	12	6	18	232	353	343	451	1379	0.17	0.26	0.25	0.33	0.57	0.8722	0.3541	0.7103	1.9521	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	14226	15162	4269	8523	11467	17814	12692	8431	12918	13255	7257	12341	9974	5447	7472	9352	10031	15424	12683	9445	23620	6178	14351	8606	19242	12549	5311	9026	5962	12043	11616	9411	8771	4621	10656	11489	10448	15884	7578	18387	13105	7206	11035	14010	11166	6065	11854	11276	8457	7911	4102	6718	4369	13264	11096	14044	2157	8347	7716	3645	9083	2629	7797	4258
GCF_028533385.1	NC_083308	NC_083308.1	Panthera onca isolate Sample0147 chromosome 14; Panthera_onca_HiC; whole genome shotgun sequence.	24805990	24883789	18289725	18333727	667100	86980331	0.29	0.29	0.21	0.21	0.01	0.42	0.951	0.0028	0.9972	1.9792	561	530	1091	13098315	14342185	10262055	10749238	315800	48767593	0.25	0.26	0.24	0.24	0.01	0.48	0.9213	0.1069	0.9023	1.9668	71930	382	339	721	307264	260011	339913	342538	15	1249741	0.26	0.21	0.26	0.27	0.53	0.8631	0.3033	0.7554	1.9349	0	7916603	8917871	6377606	6736750	217885	30166715	0.23	0.27	0.24	0.25	0.01	0.49	0.8954	0.1901	0.8372	1.9413	155	183	338	214596	219080	173513	180375	787564	0.28	0.24	0.23	0.24	0	0.48	0.8796	0.2535	0.791	1.9547	0	1808464	1891490	1242479	1263088	35300	6240821	0.27	0.28	0.22	0.22	0.01	0.44	0.904	0.1451	0.8729	1.9602	0	9	2	11	124	219	229	292	864	0.15	0.25	0.26	0.33	0.59	0.8582	0.3988	0.6861	1.9306	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8363	10870	2775	5188	7487	12059	7711	4738	7772	8344	4978	9319	6423	3828	5015	6164	6123	9461	6950	5456	14211	4192	8049	5846	12935	7570	3143	5312	3397	8561	6536	5682	5424	2940	6845	7899	6646	9779	4507	11577	8834	4729	8324	9231	6820	3870	7547	8311	5082	4992	2917	4812	2889	8425	7497	8802	1400	5575	5677	2453	6036	1913	5307	2990
GCF_028533385.1	NC_083309	NC_083309.1	Panthera onca isolate Sample0147 chromosome 15; Panthera_onca_HiC; whole genome shotgun sequence.	23141905	23142748	15764152	15737125	573200	78359130	0.3	0.3	0.2	0.2	0.01	0.4	0.9485	0.0009	0.9991	1.9699	356	385	741	10702242	11587612	7588270	7928078	247700	38053902	0.26	0.28	0.22	0.23	0.01	0.45	0.9208	0.107	0.9032	1.9603	51637	195	216	411	175054	148381	170441	175331	4	669211	0.27	0.23	0.24	0.26	0.49	0.8626	0.3018	0.757	1.9337	0	6533218	7197469	4602420	4827498	167396	23328001	0.26	0.3	0.21	0.22	0.01	0.44	0.8972	0.1741	0.8493	1.9268	149	149	298	213120	215171	166211	172070	766572	0.28	0.25	0.23	0.24	0	0.47	0.8805	0.2517	0.7923	1.9572	0	1731566	1802647	1179007	1204679	34300	5952199	0.28	0.3	0.21	0.21	0.01	0.42	0.9035	0.1509	0.8682	1.9538	0	8	11	19	230	391	375	494	1490	0.16	0.26	0.25	0.33	0.58	0.8614	0.4013	0.6899	1.9358	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4767	5827	1723	2869	4004	5723	3904	3324	3762	4329	3273	5592	3501	1863	2870	3382	3340	4886	3810	3711	6936	2160	3954	3284	6737	3651	1851	3320	2218	4462	3354	3379	2542	2236	3986	3894	3495	4425	2460	5106	4425	2129	5467	4406	3562	2454	3573	4729	2742	2769	1477	2502	2205	4194	3663	4616	1069	2623	2618	1224	3644	1452	2979	1515
GCF_028533385.1	NC_083310	NC_083310.1	Panthera onca isolate Sample0147 chromosome 16; Panthera_onca_HiC; whole genome shotgun sequence.	24665739	24599962	18634805	18583799	655100	87139405	0.28	0.28	0.21	0.21	0.01	0.43	0.9522	0.0027	0.9973	1.9818	483	543	1026	12402535	13527598	9904348	10354666	308600	46497747	0.25	0.27	0.23	0.24	0.01	0.47	0.9241	0.0998	0.9081	1.9754	156466	315	349	664	292927	242484	320381	324182	47	1180021	0.26	0.22	0.26	0.27	0.52	0.8645	0.3019	0.7564	1.9385	0	8329802	9293444	6640084	6988029	231153	31482512	0.24	0.28	0.23	0.24	0.01	0.47	0.8996	0.1821	0.8427	1.9503	147	182	329	218086	221861	186191	190273	816411	0.27	0.24	0.24	0.25	0	0.49	0.8811	0.2466	0.7961	1.9578	0	1169374	1215895	853757	875579	19600	4134205	0.26	0.28	0.22	0.23	0	0.45	0.9001	0.1653	0.8588	1.9609	0	11	6	17	201	333	326	434	1294	0.16	0.26	0.25	0.33	0.59	0.8758	0.3889	0.6902	1.9409	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8004	10668	2520	4671	7140	12150	7085	4448	7194	7642	4615	9171	6100	3778	4771	5945	5616	9013	6378	5045	13122	3723	7448	5474	12448	7227	2911	5111	3016	7617	6287	5200	4906	2931	6396	7462	6268	9322	4123	10535	8549	4653	7881	8519	6480	3782	6804	7771	4634	4669	2886	4796	2878	7625	7069	8395	1349	5478	5681	2434	5725	1790	5026	2929
GCF_028533385.1	NC_083311	NC_083311.1	Panthera onca isolate Sample0147 chromosome 17; Panthera_onca_HiC; whole genome shotgun sequence.	42202020	42111480	28151409	28143915	1059300	141668124	0.3	0.3	0.2	0.2	0.01	0.4	0.9493	0.0012	0.9988	1.9672	833	869	1702	20446758	22105392	14071130	14715569	445700	71784549	0.26	0.28	0.22	0.23	0.01	0.45	0.92	0.1105	0.8993	1.9692	28853	476	509	985	426630	361555	412724	425615	100	1626624	0.27	0.23	0.24	0.26	0.5	0.8641	0.3066	0.7536	1.9403	0	13140114	14434731	8885913	9345564	308600	46114922	0.26	0.3	0.21	0.22	0.01	0.43	0.897	0.1939	0.8353	1.9425	280	284	564	440993	445091	331785	344950	1562819	0.29	0.25	0.23	0.24	0	0.46	0.8783	0.2643	0.7845	1.9513	0	3099777	3239066	1976432	2023528	67600	10406403	0.28	0.3	0.2	0.21	0.01	0.42	0.901	0.163	0.8613	1.948	0	71	71	142	2007	2410	2789	3483	10689	0.19	0.23	0.26	0.33	0.59	0.8831	0.2419	0.7928	1.9593	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	11799	14837	4068	7188	9267	15114	9745	7784	9691	10848	7592	14073	8914	4101	7091	8388	8658	11436	9315	8642	17101	5539	9919	8353	16496	9179	4708	8322	5348	10886	8521	8219	6628	5023	9359	9330	8182	11181	5823	12260	10696	4540	13254	10105	8290	5811	8992	11589	7031	6726	3339	4858	4880	10350	9471	11251	2469	5729	5747	2670	8880	3154	7308	3492
GCF_028533385.1	NC_083312	NC_083312.1	Panthera onca isolate Sample0147 chromosome 18; Panthera_onca_HiC; whole genome shotgun sequence.	39796890	40047107	28570080	28675213	1010700	138099990	0.29	0.29	0.21	0.21	0.01	0.41	0.9505	0.005	0.995	1.9763	1001	939	1940	21192749	23201054	15746136	16544078	475300	77159317	0.26	0.28	0.23	0.23	0.01	0.46	0.921	0.1076	0.9018	1.969	130464	610	585	1195	538609	458212	544984	558599	190	2100594	0.27	0.23	0.24	0.26	0.5	0.864	0.3078	0.7526	1.9389	0	14161344	15792679	10361189	10942410	349210	51606832	0.25	0.29	0.22	0.23	0.01	0.45	0.8958	0.1876	0.8387	1.9418	355	320	675	388791	390427	315591	327097	1421906	0.28	0.25	0.23	0.24	0	0.48	0.8788	0.2431	0.7979	1.9562	0	2607461	2726996	1792227	1841554	51400	9019638	0.27	0.28	0.22	0.22	0	0.44	0.9017	0.1627	0.8601	1.9564	0	23	24	47	556	887	907	1215	3565	0.16	0.25	0.25	0.34	0.59	0.8811	0.3721	0.7013	1.9393	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	14696	18372	5200	9335	12705	20675	12867	9030	12243	14048	9529	17922	11297	5458	8958	10398	11084	15375	11803	10546	23109	6847	13114	11228	21541	12091	6072	10253	6437	13413	10779	10274	8458	5869	11739	12645	10595	14514	7523	17313	14292	6714	15568	13945	11134	7094	11466	14349	8949	8788	4347	6854	5978	13713	12184	15175	2855	8112	7638	3636	11016	3699	9221	4543
GCF_028533385.1	NC_083313	NC_083313.1	Panthera onca isolate Sample0147 chromosome 19; Panthera_onca_HiC; whole genome shotgun sequence.	61283564	61413253	43296873	43328350	1398200	210720240	0.29	0.29	0.21	0.21	0.01	0.41	0.9522	0.0014	0.9986	1.9749	1365	1273	2638	32220399	35017385	23400812	24478659	678700	115795955	0.26	0.27	0.23	0.24	0	0.46	0.9215	0.1028	0.906	1.968	154783	894	832	1726	799101	669456	808914	823168	118	3100757	0.27	0.22	0.25	0.26	0.51	0.8633	0.3093	0.7517	1.9367	0	21429231	23703160	15340868	16107160	493482	77073901	0.25	0.29	0.22	0.23	0	0.45	0.8945	0.1888	0.8381	1.9379	436	399	835	449032	447358	366098	377082	1639570	0.28	0.25	0.23	0.24	0	0.48	0.8788	0.2529	0.791	1.9551	11	3177137	3293427	2147004	2200127	66600	10884295	0.27	0.29	0.22	0.22	0	0.44	0.9034	0.1563	0.8643	1.9572	0	25	22	47	559	922	911	1186	3578	0.16	0.26	0.25	0.33	0.58	0.8716	0.3793	0.6943	1.9414	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	22823	28713	7356	13375	18606	28692	18267	13442	18457	20888	13791	24544	16972	8277	13217	15569	15564	22597	17317	14669	34279	10740	19095	15066	32006	17954	8988	15319	9118	20388	15841	14722	12277	9019	17994	17911	15914	22296	11235	25368	20901	9939	23933	20900	16537	10328	17253	20908	12309	12579	6648	10401	8998	20029	17899	22979	4673	11953	11883	5434	16775	6000	13885	6688
NA	NC_022842	NC_022842.1	Panthera onca mitochondrion; complete genome.	5447	4627	4509	2466	0	17049	0.32	0.27	0.26	0.14	0	0.41	0.931	0.3743	0.6982	1.9475	12	1	13	3392	3252	3131	1635	0	11410	0.3	0.29	0.27	0.14	0	0.41	0.892	0.4642	0.6551	1.921	51	6	1	7	1421	1539	1274	845	0	5079	0.29	0.31	0.24	0.16	0.4	0.8863	0.4578	0.6593	1.9168	43	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	6	3	9	212	198	111	113	634	0.33	0.31	0.17	0.18	0.35	0.8725	0.2991	0.7534	1.9043	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	36	8	47	36	34	16	41	81	28	13	30	30	49	8	9	28	20	25	48	59	29	26	27	22	3	37	102	12	37	45	64	29	23	61	43	21	33	37	25	32	13	5	30	30	7	15	20	1	5	15	5	5	42	23	0	26	0	0	3	4	32	6	31	21